Protein–RNA interactions for Protein: E9Q2N0

Cpsf4l, Cleavage and polyadenylation-specific factor 4-like, mousemouse

Predictions only

Length 280 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cpsf4lE9Q2N0 A730035I17Rik-205ENSMUST00000205851 684 ntBASIC17.76■□□□□ 0.43
Cpsf4lE9Q2N0 Gm18190-203ENSMUST00000209944 389 ntTSL 2 BASIC17.76■□□□□ 0.43
Cpsf4lE9Q2N0 Pgam1-201ENSMUST00000011896 1831 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Cpsf4lE9Q2N0 Shisa8-201ENSMUST00000179269 1804 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Cpsf4lE9Q2N0 Hmg20b-203ENSMUST00000105324 1540 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Cpsf4lE9Q2N0 Olig3-201ENSMUST00000053225 2072 ntAPPRIS P1 BASIC17.76■□□□□ 0.43
Cpsf4lE9Q2N0 Pou3f3-201ENSMUST00000054883 7409 ntAPPRIS P1 BASIC17.76■□□□□ 0.43
Cpsf4lE9Q2N0 Prdm11-205ENSMUST00000178666 1870 ntTSL 5 BASIC17.75■□□□□ 0.43
Cpsf4lE9Q2N0 Cdc16-201ENSMUST00000043962 2301 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Cpsf4lE9Q2N0 Zfp629-208ENSMUST00000151107 583 ntTSL 3 BASIC17.75■□□□□ 0.43
Cpsf4lE9Q2N0 Bex1-201ENSMUST00000058125 866 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Cpsf4lE9Q2N0 Gm26796-201ENSMUST00000181092 2276 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
Cpsf4lE9Q2N0 Klf15-201ENSMUST00000032174 2373 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Cpsf4lE9Q2N0 Setd6-201ENSMUST00000034096 1707 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Cpsf4lE9Q2N0 Porcn-203ENSMUST00000089402 1839 ntAPPRIS ALT1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Cpsf4lE9Q2N0 Hey1-201ENSMUST00000042412 2423 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Cpsf4lE9Q2N0 Smurf2-202ENSMUST00000103067 5290 ntTSL 5 BASIC17.74■□□□□ 0.43
Cpsf4lE9Q2N0 BC037034-201ENSMUST00000048421 2490 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Cpsf4lE9Q2N0 Abhd12-201ENSMUST00000056149 1999 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Cpsf4lE9Q2N0 Dleu2-201ENSMUST00000180377 1165 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
Cpsf4lE9Q2N0 Gm10399-202ENSMUST00000202768 748 ntBASIC17.74■□□□□ 0.43
Cpsf4lE9Q2N0 Gadd45a-207ENSMUST00000204369 716 ntTSL 5 BASIC17.74■□□□□ 0.43
Cpsf4lE9Q2N0 2210011C24Rik-204ENSMUST00000190457 1351 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Cpsf4lE9Q2N0 H2afj-201ENSMUST00000074556 1831 ntAPPRIS P2 BASIC17.74■□□□□ 0.43
Cpsf4lE9Q2N0 Atxn7l2-201ENSMUST00000102633 3044 ntAPPRIS P2 TSL 1 (best) BASIC17.74■□□□□ 0.43
Cpsf4lE9Q2N0 Gpr160-202ENSMUST00000108258 2139 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Cpsf4lE9Q2N0 Raph1-201ENSMUST00000027168 2241 ntAPPRIS ALT2 TSL 5 BASIC17.74■□□□□ 0.43
Cpsf4lE9Q2N0 Ubl4a-206ENSMUST00000155676 2442 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Cpsf4lE9Q2N0 Hes7-201ENSMUST00000024543 1809 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Cpsf4lE9Q2N0 Gm42501-201ENSMUST00000200220 1026 ntBASIC17.73■□□□□ 0.43
Cpsf4lE9Q2N0 Ech1-201ENSMUST00000066264 1267 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Cpsf4lE9Q2N0 Tmem41a-201ENSMUST00000023562 1359 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Cpsf4lE9Q2N0 Cers5-201ENSMUST00000023762 2096 ntAPPRIS P2 TSL 1 (best) BASIC17.73■□□□□ 0.43
Cpsf4lE9Q2N0 Sult4a1-201ENSMUST00000082365 2383 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Cpsf4lE9Q2N0 March2-206ENSMUST00000173329 2566 ntTSL 2 BASIC17.73■□□□□ 0.43
Cpsf4lE9Q2N0 Gsr-201ENSMUST00000033992 2673 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Cpsf4lE9Q2N0 Slc27a3-201ENSMUST00000029541 2259 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Cpsf4lE9Q2N0 2010300C02Rik-203ENSMUST00000162875 4634 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Cpsf4lE9Q2N0 Hrasls-204ENSMUST00000162747 854 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Cpsf4lE9Q2N0 Dleu2-209ENSMUST00000182957 352 ntTSL 2 BASIC17.72■□□□□ 0.43
Cpsf4lE9Q2N0 Rab42-201ENSMUST00000040411 761 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Cpsf4lE9Q2N0 Retreg2-208ENSMUST00000190240 2438 ntAPPRIS ALT2 TSL 1 (best) BASIC17.72■□□□□ 0.43
Cpsf4lE9Q2N0 Fcho2-201ENSMUST00000040340 5122 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Cpsf4lE9Q2N0 Tfg-201ENSMUST00000065515 1945 ntAPPRIS P2 TSL 1 (best) BASIC17.72■□□□□ 0.43
Cpsf4lE9Q2N0 Pithd1-201ENSMUST00000105851 1700 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Cpsf4lE9Q2N0 Gtf2e2-202ENSMUST00000170705 1634 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Cpsf4lE9Q2N0 Lgi2-201ENSMUST00000039750 6456 ntAPPRIS P3 TSL 1 (best) BASIC17.72■□□□□ 0.43
Cpsf4lE9Q2N0 Pdf-201ENSMUST00000055316 1306 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Cpsf4lE9Q2N0 Phf2-201ENSMUST00000035540 5494 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Cpsf4lE9Q2N0 Cic-202ENSMUST00000163320 6096 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
Cpsf4lE9Q2N0 Cic-201ENSMUST00000005578 6099 ntTSL 5 BASIC17.71■□□□□ 0.43
Cpsf4lE9Q2N0 Snapin-203ENSMUST00000149884 1928 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Cpsf4lE9Q2N0 Ankrd54-201ENSMUST00000040676 1904 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Cpsf4lE9Q2N0 Gt(ROSA)26Sor-201ENSMUST00000124246 1181 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
Cpsf4lE9Q2N0 Uap1-203ENSMUST00000111351 2287 ntAPPRIS ALT2 TSL 1 (best) BASIC17.71■□□□□ 0.43
Cpsf4lE9Q2N0 Uap1-201ENSMUST00000027981 2283 ntAPPRIS P3 TSL 1 (best) BASIC17.71■□□□□ 0.43
Cpsf4lE9Q2N0 Kctd8-202ENSMUST00000087231 1860 ntAPPRIS ALT2 TSL 1 (best) BASIC17.71■□□□□ 0.43
Cpsf4lE9Q2N0 Neurl4-211ENSMUST00000177138 4886 ntAPPRIS ALT2 TSL 1 (best) BASIC17.71■□□□□ 0.43
Cpsf4lE9Q2N0 Timmdc1-201ENSMUST00000002925 1573 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Cpsf4lE9Q2N0 Bub3-205ENSMUST00000208571 747 ntTSL 5 BASIC17.7■□□□□ 0.42
Cpsf4lE9Q2N0 H2-Q2-201ENSMUST00000074806 1262 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Cpsf4lE9Q2N0 Uchl5-206ENSMUST00000189936 1696 ntAPPRIS P3 TSL 1 (best) BASIC17.7■□□□□ 0.42
Cpsf4lE9Q2N0 Best2-202ENSMUST00000209322 1944 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Cpsf4lE9Q2N0 Gm26617-201ENSMUST00000180381 4429 ntTSL 3 BASIC17.7■□□□□ 0.42
Cpsf4lE9Q2N0 Lrrfip2-205ENSMUST00000196981 1839 ntAPPRIS ALT2 TSL 5 BASIC17.7■□□□□ 0.42
Cpsf4lE9Q2N0 Tmem150b-201ENSMUST00000086363 1341 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Cpsf4lE9Q2N0 Mbnl3-203ENSMUST00000114876 2243 ntAPPRIS P2 TSL 1 (best) BASIC17.7■□□□□ 0.42
Cpsf4lE9Q2N0 Gm16286-205ENSMUST00000127234 1755 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Cpsf4lE9Q2N0 Cblc-202ENSMUST00000108449 1514 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
Cpsf4lE9Q2N0 Foxj3-206ENSMUST00000138845 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC17.69■□□□□ 0.42
Cpsf4lE9Q2N0 Selenof-201ENSMUST00000082437 1514 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Cpsf4lE9Q2N0 Mau2-206ENSMUST00000212451 1931 ntAPPRIS ALT2 TSL 1 (best) BASIC17.69■□□□□ 0.42
Cpsf4lE9Q2N0 Eml4-201ENSMUST00000049503 5109 ntAPPRIS P3 TSL 1 (best) BASIC17.69■□□□□ 0.42
Cpsf4lE9Q2N0 Srsf6-202ENSMUST00000126163 515 ntTSL 5 BASIC17.69■□□□□ 0.42
Cpsf4lE9Q2N0 Cops7a-201ENSMUST00000032220 1817 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Cpsf4lE9Q2N0 Pgk1-201ENSMUST00000081593 1825 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Cpsf4lE9Q2N0 Cotl1-201ENSMUST00000034285 1596 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Cpsf4lE9Q2N0 Htra2-201ENSMUST00000089645 1725 ntAPPRIS P2 TSL 1 (best) BASIC17.69■□□□□ 0.42
Cpsf4lE9Q2N0 Ptpn12-201ENSMUST00000030556 3280 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Cpsf4lE9Q2N0 Rhob-201ENSMUST00000067384 2349 ntAPPRIS P1 BASIC17.69■□□□□ 0.42
Cpsf4lE9Q2N0 Kcnq5-201ENSMUST00000029667 6562 ntAPPRIS P3 TSL 1 (best) BASIC17.69■□□□□ 0.42
Cpsf4lE9Q2N0 Gm12504-201ENSMUST00000120860 2231 ntBASIC17.68■□□□□ 0.42
Cpsf4lE9Q2N0 Fance-204ENSMUST00000114804 1842 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
Cpsf4lE9Q2N0 Nkx2-2-201ENSMUST00000067075 2120 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Cpsf4lE9Q2N0 Ube2e3-202ENSMUST00000121433 1235 ntAPPRIS P1 TSL 5 BASIC17.68■□□□□ 0.42
Cpsf4lE9Q2N0 Bloc1s4-201ENSMUST00000071949 1273 ntAPPRIS P1 BASIC17.68■□□□□ 0.42
Cpsf4lE9Q2N0 Ssbp4-201ENSMUST00000049908 1475 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Cpsf4lE9Q2N0 Dync1i1-203ENSMUST00000115556 2718 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
Cpsf4lE9Q2N0 Taf4-201ENSMUST00000041618 4416 ntAPPRIS P2 TSL 1 (best) BASIC17.67■□□□□ 0.42
Cpsf4lE9Q2N0 Hexdc-201ENSMUST00000038831 2378 ntAPPRIS ALT2 TSL 5 BASIC17.67■□□□□ 0.42
Cpsf4lE9Q2N0 E130208F15Rik-201ENSMUST00000098585 1733 ntAPPRIS P1 BASIC17.67■□□□□ 0.42
Cpsf4lE9Q2N0 Fndc5-201ENSMUST00000102600 2763 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Cpsf4lE9Q2N0 Gm17324-201ENSMUST00000165499 922 ntAPPRIS P1 BASIC17.67■□□□□ 0.42
Cpsf4lE9Q2N0 Nnat-207ENSMUST00000173041 760 ntTSL 5 BASIC17.67■□□□□ 0.42
Cpsf4lE9Q2N0 Gpx7-202ENSMUST00000184609 331 ntTSL 3 BASIC17.67■□□□□ 0.42
Cpsf4lE9Q2N0 Sin3b-203ENSMUST00000212095 1257 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
Cpsf4lE9Q2N0 Gm5131-201ENSMUST00000212776 1238 ntBASIC17.67■□□□□ 0.42
Cpsf4lE9Q2N0 Kif1bp-201ENSMUST00000065887 2472 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Cpsf4lE9Q2N0 Zfp287-205ENSMUST00000150336 1605 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
Cpsf4lE9Q2N0 Pan3-209ENSMUST00000176600 5541 ntAPPRIS ALT2 TSL 5 BASIC17.67■□□□□ 0.42
Retrieved 100 of 76,532 protein–RNA pairs in 23.6 ms