Protein–RNA interactions for Protein: E9PXX9

Slc28a1, Sodium/nucleoside cotransporter, mousemouse

Predictions only

Length 648 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Slc28a1E9PXX9 Gm39157-201ENSMUST00000212322 1180 ntTSL 5 BASIC19.68■□□□□ 0.74
Slc28a1E9PXX9 4930500M09Rik-202ENSMUST00000194988 1563 ntBASIC19.68■□□□□ 0.74
Slc28a1E9PXX9 Olig1-201ENSMUST00000056882 2162 ntAPPRIS P1 BASIC19.68■□□□□ 0.74
Slc28a1E9PXX9 Shox2-201ENSMUST00000029422 3079 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Slc28a1E9PXX9 Fgf16-201ENSMUST00000033581 1645 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Slc28a1E9PXX9 Crlf3-203ENSMUST00000103233 2230 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
Slc28a1E9PXX9 Galnt11-201ENSMUST00000045737 2552 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Slc28a1E9PXX9 Tinagl1-202ENSMUST00000105998 1976 ntAPPRIS P2 TSL 1 (best) BASIC19.68■□□□□ 0.74
Slc28a1E9PXX9 Atg3-201ENSMUST00000023343 2057 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Slc28a1E9PXX9 Sox2-201ENSMUST00000099151 2057 ntAPPRIS P1 BASIC19.67■□□□□ 0.74
Slc28a1E9PXX9 Ipmk-203ENSMUST00000121446 1492 ntAPPRIS ALT2 TSL 5 BASIC19.67■□□□□ 0.74
Slc28a1E9PXX9 Dgat1-201ENSMUST00000023214 1888 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Slc28a1E9PXX9 Nudt3-203ENSMUST00000114886 996 ntTSL 2 BASIC19.67■□□□□ 0.74
Slc28a1E9PXX9 Trim33-202ENSMUST00000106860 5025 ntAPPRIS ALT2 TSL 1 (best) BASIC19.67■□□□□ 0.74
Slc28a1E9PXX9 Rab3ip-203ENSMUST00000219109 1844 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Slc28a1E9PXX9 Usp2-206ENSMUST00000176416 1486 ntAPPRIS ALT2 TSL 1 (best) BASIC19.67■□□□□ 0.74
Slc28a1E9PXX9 A430027H14Rik-201ENSMUST00000191809 1467 ntBASIC19.67■□□□□ 0.74
Slc28a1E9PXX9 Slc35f3-201ENSMUST00000108759 2309 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Slc28a1E9PXX9 Stbd1-201ENSMUST00000050952 1985 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Slc28a1E9PXX9 Ntf5-201ENSMUST00000058879 1963 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Slc28a1E9PXX9 Mpnd-204ENSMUST00000149441 1701 ntAPPRIS P2 TSL 1 (best) BASIC19.66■□□□□ 0.74
Slc28a1E9PXX9 Pkd2-201ENSMUST00000086831 5219 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Slc28a1E9PXX9 Ltk-202ENSMUST00000082130 2767 ntAPPRIS ALT2 TSL 1 (best) BASIC19.66■□□□□ 0.74
Slc28a1E9PXX9 Gm5987-201ENSMUST00000196433 1151 ntBASIC19.66■□□□□ 0.74
Slc28a1E9PXX9 Pard6a-201ENSMUST00000093195 1265 ntAPPRIS P3 TSL 1 (best) BASIC19.66■□□□□ 0.74
Slc28a1E9PXX9 Arpc2-201ENSMUST00000006467 1404 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Slc28a1E9PXX9 Gsr-201ENSMUST00000033992 2673 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Slc28a1E9PXX9 Ccdc112-201ENSMUST00000072835 2801 ntAPPRIS P1 TSL 5 BASIC19.66■□□□□ 0.74
Slc28a1E9PXX9 Tmem230-202ENSMUST00000110163 1551 ntAPPRIS P1 TSL 3 BASIC19.66■□□□□ 0.74
Slc28a1E9PXX9 1700001C19Rik-201ENSMUST00000061885 1622 ntAPPRIS P3 TSL 1 (best) BASIC19.65■□□□□ 0.74
Slc28a1E9PXX9 Ccr10-201ENSMUST00000062759 1726 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Slc28a1E9PXX9 Mvb12b-201ENSMUST00000041555 4998 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Slc28a1E9PXX9 Pcbd2-201ENSMUST00000021958 544 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
Slc28a1E9PXX9 Slc50a1-201ENSMUST00000029565 1022 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Slc28a1E9PXX9 Id3-201ENSMUST00000008016 1278 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Slc28a1E9PXX9 Gm20458-201ENSMUST00000164863 1369 ntAPPRIS P1 TSL 5 BASIC19.65■□□□□ 0.74
Slc28a1E9PXX9 Rbfa-201ENSMUST00000025462 1377 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Slc28a1E9PXX9 Lrrc38-201ENSMUST00000052458 2324 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Slc28a1E9PXX9 Fance-201ENSMUST00000088007 1581 ntAPPRIS P1 TSL 5 BASIC19.65■□□□□ 0.74
Slc28a1E9PXX9 Tm9sf3-201ENSMUST00000025989 6144 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Slc28a1E9PXX9 Rspo1-201ENSMUST00000030687 1834 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Slc28a1E9PXX9 Gm3558-201ENSMUST00000163790 2055 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.74
Slc28a1E9PXX9 Ccnd3-218ENSMUST00000183177 2060 ntAPPRIS P1 TSL 5 BASIC19.64■□□□□ 0.74
Slc28a1E9PXX9 Kif27-203ENSMUST00000225388 5121 ntAPPRIS P1 BASIC19.64■□□□□ 0.74
Slc28a1E9PXX9 Nkpd1-203ENSMUST00000214205 2309 ntAPPRIS ALT2 TSL 5 BASIC19.64■□□□□ 0.74
Slc28a1E9PXX9 Lzts2-202ENSMUST00000178087 2773 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Slc28a1E9PXX9 Hcn4-201ENSMUST00000034889 6118 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Slc28a1E9PXX9 Ppcs-201ENSMUST00000030385 1443 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Slc28a1E9PXX9 1700034H15Rik-201ENSMUST00000069573 1461 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
Slc28a1E9PXX9 Aurkb-202ENSMUST00000108666 1831 ntAPPRIS P1 TSL 5 BASIC19.64■□□□□ 0.73
Slc28a1E9PXX9 Thap11-201ENSMUST00000040445 1819 ntAPPRIS P1 BASIC19.64■□□□□ 0.73
Slc28a1E9PXX9 Ptov1-201ENSMUST00000046575 1883 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Slc28a1E9PXX9 Dedd2-202ENSMUST00000205271 1942 ntAPPRIS P1 TSL 5 BASIC19.64■□□□□ 0.73
Slc28a1E9PXX9 Clip1-205ENSMUST00000111566 6133 ntAPPRIS P3 TSL 1 (best) BASIC19.64■□□□□ 0.73
Slc28a1E9PXX9 Ipp-202ENSMUST00000106479 2118 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Slc28a1E9PXX9 Ipp-201ENSMUST00000030461 2115 ntAPPRIS P1 TSL 5 BASIC19.64■□□□□ 0.73
Slc28a1E9PXX9 Zbtb4-203ENSMUST00000108640 4067 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Slc28a1E9PXX9 Crtc2-201ENSMUST00000029545 2747 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Slc28a1E9PXX9 Desi2-204ENSMUST00000161075 2590 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
Slc28a1E9PXX9 Hoxd13-201ENSMUST00000001872 2483 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Slc28a1E9PXX9 Lsr-205ENSMUST00000205961 2021 ntAPPRIS P3 TSL 1 (best) BASIC19.63■□□□□ 0.73
Slc28a1E9PXX9 Tusc3-201ENSMUST00000167992 1511 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Slc28a1E9PXX9 Ctsz-201ENSMUST00000016400 1441 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Slc28a1E9PXX9 Inhbb-201ENSMUST00000038765 4255 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Slc28a1E9PXX9 4930426D05Rik-204ENSMUST00000144487 1393 ntTSL 5 BASIC19.63■□□□□ 0.73
Slc28a1E9PXX9 Col23a1-201ENSMUST00000102765 5658 ntAPPRIS P1 TSL 5 BASIC19.63■□□□□ 0.73
Slc28a1E9PXX9 Cbln2-201ENSMUST00000068423 2475 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Slc28a1E9PXX9 Cdkl3-210ENSMUST00000121591 2387 ntAPPRIS ALT2 TSL 1 (best) BASIC19.63■□□□□ 0.73
Slc28a1E9PXX9 Arhgap23-202ENSMUST00000107601 5450 ntTSL 5 BASIC19.63■□□□□ 0.73
Slc28a1E9PXX9 4430402I18Rik-201ENSMUST00000025872 2152 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
Slc28a1E9PXX9 Spns2-201ENSMUST00000045303 3241 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Slc28a1E9PXX9 Calml3-201ENSMUST00000077698 1421 ntAPPRIS P1 BASIC19.62■□□□□ 0.73
Slc28a1E9PXX9 Gm5913-201ENSMUST00000119397 1399 ntBASIC19.62■□□□□ 0.73
Slc28a1E9PXX9 Tmem70-201ENSMUST00000065373 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC19.62■□□□□ 0.73
Slc28a1E9PXX9 Riox1-201ENSMUST00000053744 2344 ntAPPRIS P1 BASIC19.62■□□□□ 0.73
Slc28a1E9PXX9 Cltb-202ENSMUST00000091609 2186 ntAPPRIS P3 TSL 1 (best) BASIC19.61■□□□□ 0.73
Slc28a1E9PXX9 Kifc3-201ENSMUST00000034240 3277 ntAPPRIS P4 TSL 1 (best) BASIC19.61■□□□□ 0.73
Slc28a1E9PXX9 Crlf2-201ENSMUST00000044579 1323 ntAPPRIS P3 TSL 1 (best) BASIC19.61■□□□□ 0.73
Slc28a1E9PXX9 Tead2-201ENSMUST00000033060 2140 ntAPPRIS P3 TSL 1 (best) BASIC19.61■□□□□ 0.73
Slc28a1E9PXX9 Baiap2-203ENSMUST00000103021 3398 ntAPPRIS ALT2 TSL 1 (best) BASIC19.61■□□□□ 0.73
Slc28a1E9PXX9 Sox17-202ENSMUST00000116652 1512 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Slc28a1E9PXX9 Bsg-201ENSMUST00000067036 1526 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Slc28a1E9PXX9 Bcl10-201ENSMUST00000029842 1949 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Slc28a1E9PXX9 Mcmbp-202ENSMUST00000119081 2347 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
Slc28a1E9PXX9 Fpgs-201ENSMUST00000028148 2273 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Slc28a1E9PXX9 5031439G07Rik-203ENSMUST00000165743 5032 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
Slc28a1E9PXX9 Rasa1-201ENSMUST00000109552 4563 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Slc28a1E9PXX9 Sephs1-202ENSMUST00000115019 2933 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Slc28a1E9PXX9 Cenpb-201ENSMUST00000089510 4886 ntAPPRIS P1 BASIC19.6■□□□□ 0.73
Slc28a1E9PXX9 Lpar3-201ENSMUST00000039164 2464 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Slc28a1E9PXX9 Pds5a-209ENSMUST00000201948 8934 ntAPPRIS P1 TSL 5 BASIC19.6■□□□□ 0.73
Slc28a1E9PXX9 Vamp4-206ENSMUST00000150040 901 ntAPPRIS P1 TSL 5 BASIC19.6■□□□□ 0.73
Slc28a1E9PXX9 Gm21988-202ENSMUST00000176268 1621 ntAPPRIS P5 TSL 5 BASIC19.6■□□□□ 0.73
Slc28a1E9PXX9 Cops7a-201ENSMUST00000032220 1817 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Slc28a1E9PXX9 P2ry2-202ENSMUST00000178340 2137 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Slc28a1E9PXX9 Gm10616-201ENSMUST00000205285 2127 ntBASIC19.6■□□□□ 0.73
Slc28a1E9PXX9 Gab2-202ENSMUST00000206791 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC19.6■□□□□ 0.73
Slc28a1E9PXX9 Uap1-202ENSMUST00000111350 2311 ntAPPRIS ALT1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Slc28a1E9PXX9 Ffar4-201ENSMUST00000067098 1393 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Slc28a1E9PXX9 Tada1-201ENSMUST00000027846 2215 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Retrieved 100 of 76,532 protein–RNA pairs in 65.9 ms