Protein–RNA interactions for Protein: E9PVA8

Gcn1, eIF-2-alpha kinase activator GCN1, mousemouse

Known RBP Predictions only

Length 2,671 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gcn1E9PVA8 Gm6206-201ENSMUST00000133472 2199 ntBASIC18.28■□□□□ 0.52
Gcn1E9PVA8 Gm10941-201ENSMUST00000105408 708 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
Gcn1E9PVA8 Mettl24-201ENSMUST00000058747 1529 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Gcn1E9PVA8 Dcxr-202ENSMUST00000106148 830 ntTSL 2 BASIC18.28■□□□□ 0.52
Gcn1E9PVA8 Gm13063-201ENSMUST00000132247 669 ntTSL 3 BASIC18.28■□□□□ 0.52
Gcn1E9PVA8 Gm14486-201ENSMUST00000144704 644 ntTSL 3 BASIC18.28■□□□□ 0.52
Gcn1E9PVA8 Gm42778-201ENSMUST00000199644 553 ntBASIC18.28■□□□□ 0.52
Gcn1E9PVA8 Map2k2-202ENSMUST00000105331 1556 ntAPPRIS ALT1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Gcn1E9PVA8 Det1-201ENSMUST00000032839 2269 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Gcn1E9PVA8 Asf1a-201ENSMUST00000020004 2201 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Gcn1E9PVA8 Arl6ip4-202ENSMUST00000122394 982 ntAPPRIS ALT2 TSL 5 BASIC18.27■□□□□ 0.52
Gcn1E9PVA8 Pts-208ENSMUST00000215416 439 ntTSL 2 BASIC18.26■□□□□ 0.51
Gcn1E9PVA8 Hdgf-201ENSMUST00000005017 2245 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Gcn1E9PVA8 Hist1h4c-201ENSMUST00000102967 820 ntAPPRIS P1 BASIC18.26■□□□□ 0.51
Gcn1E9PVA8 Gm13181-201ENSMUST00000120117 1069 ntBASIC18.26■□□□□ 0.51
Gcn1E9PVA8 Tcte2-209ENSMUST00000143162 1221 ntAPPRIS ALT2 TSL 1 (best) BASIC18.26■□□□□ 0.51
Gcn1E9PVA8 Tceanc2-201ENSMUST00000030362 935 ntAPPRIS P1 TSL 3 BASIC18.26■□□□□ 0.51
Gcn1E9PVA8 Usf3-201ENSMUST00000088356 757 ntAPPRIS ALT2 TSL 5 BASIC18.26■□□□□ 0.51
Gcn1E9PVA8 Gm10306-201ENSMUST00000094969 533 ntAPPRIS P1 BASIC18.26■□□□□ 0.51
Gcn1E9PVA8 Gm9828-202ENSMUST00000126622 1446 ntTSL 3 BASIC18.25■□□□□ 0.51
Gcn1E9PVA8 Preb-209ENSMUST00000202567 1869 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
Gcn1E9PVA8 Tomm6-201ENSMUST00000113301 594 ntAPPRIS P1 TSL 2 BASIC18.25■□□□□ 0.51
Gcn1E9PVA8 Mrps23-203ENSMUST00000118784 1404 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
Gcn1E9PVA8 Dynll1-201ENSMUST00000009157 2030 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Gcn1E9PVA8 Hotairm1-201ENSMUST00000129546 409 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
Gcn1E9PVA8 AV026068-204ENSMUST00000186214 633 ntTSL 2 BASIC18.25■□□□□ 0.51
Gcn1E9PVA8 Gm10819-201ENSMUST00000099988 561 ntBASIC18.25■□□□□ 0.51
Gcn1E9PVA8 AC164433.2-201ENSMUST00000226346 1701 ntBASIC18.24■□□□□ 0.51
Gcn1E9PVA8 Nsg1-204ENSMUST00000201363 820 ntAPPRIS P1 TSL 2 BASIC18.24■□□□□ 0.51
Gcn1E9PVA8 Ferd3l-201ENSMUST00000061035 886 ntAPPRIS P1 BASIC18.24■□□□□ 0.51
Gcn1E9PVA8 Pde8b-204ENSMUST00000159608 2370 ntTSL 5 BASIC18.24■□□□□ 0.51
Gcn1E9PVA8 0610010K14Rik-208ENSMUST00000108578 880 ntAPPRIS ALT2 TSL 1 (best) BASIC18.23■□□□□ 0.51
Gcn1E9PVA8 1110046J04Rik-201ENSMUST00000147622 397 ntTSL 3 BASIC18.23■□□□□ 0.51
Gcn1E9PVA8 Coq2-201ENSMUST00000031262 1743 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Gcn1E9PVA8 Rpl13-201ENSMUST00000000756 780 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Gcn1E9PVA8 Mapk1-203ENSMUST00000115731 1747 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Gcn1E9PVA8 Fam241b-203ENSMUST00000124615 1493 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Gcn1E9PVA8 Dnajc19-203ENSMUST00000117223 1695 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
Gcn1E9PVA8 Galnt12-201ENSMUST00000045041 2288 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Gcn1E9PVA8 Nfe2l3-203ENSMUST00000160133 1125 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
Gcn1E9PVA8 Nsd1-206ENSMUST00000224918 1001 ntBASIC18.22■□□□□ 0.51
Gcn1E9PVA8 Ppa1-201ENSMUST00000020286 1364 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Gcn1E9PVA8 Gm4968-201ENSMUST00000071458 858 ntBASIC18.22■□□□□ 0.51
Gcn1E9PVA8 Kdm2a-203ENSMUST00000116571 2413 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
Gcn1E9PVA8 Ppp1r14c-202ENSMUST00000217573 2013 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
Gcn1E9PVA8 Rbmxl1-202ENSMUST00000211719 1622 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Gcn1E9PVA8 Gm26879-201ENSMUST00000181127 1176 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
Gcn1E9PVA8 Glp1r-201ENSMUST00000114574 1480 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Gcn1E9PVA8 Ltb4r2-201ENSMUST00000044554 1439 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Gcn1E9PVA8 Nfix-201ENSMUST00000076715 1403 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
Gcn1E9PVA8 Acvr2b-202ENSMUST00000165044 2093 ntTSL 2 BASIC18.21■□□□□ 0.51
Gcn1E9PVA8 Rnf166-201ENSMUST00000014614 1783 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Gcn1E9PVA8 Tmem203-201ENSMUST00000104998 854 ntAPPRIS P1 BASIC18.2■□□□□ 0.5
Gcn1E9PVA8 Rab6b-202ENSMUST00000189134 716 ntTSL 3 BASIC18.2■□□□□ 0.5
Gcn1E9PVA8 Ppp2r2c-203ENSMUST00000201156 461 ntTSL 5 BASIC18.2■□□□□ 0.5
Gcn1E9PVA8 Bend7-202ENSMUST00000115022 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC18.2■□□□□ 0.5
Gcn1E9PVA8 Sugct-201ENSMUST00000068545 1701 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Gcn1E9PVA8 Zfp787-201ENSMUST00000094870 1897 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Gcn1E9PVA8 Gm20878-202ENSMUST00000108028 339 ntAPPRIS ALT2 TSL 5 BASIC18.2■□□□□ 0.5
Gcn1E9PVA8 Eva1b-201ENSMUST00000052876 1689 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Gcn1E9PVA8 H2-Ke6-201ENSMUST00000045467 965 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Gcn1E9PVA8 Shisa5-201ENSMUST00000026737 1834 ntAPPRIS P3 TSL 1 (best) BASIC18.19■□□□□ 0.5
Gcn1E9PVA8 AC153524.1-201ENSMUST00000220436 1935 ntBASIC18.19■□□□□ 0.5
Gcn1E9PVA8 Snhg20-202ENSMUST00000149822 593 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
Gcn1E9PVA8 Plac9b-203ENSMUST00000184142 1040 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Gcn1E9PVA8 AC175538.2-202ENSMUST00000224997 1057 ntAPPRIS P1 BASIC18.19■□□□□ 0.5
Gcn1E9PVA8 Slc36a4-202ENSMUST00000115588 1745 ntAPPRIS ALT2 TSL 1 (best) BASIC18.19■□□□□ 0.5
Gcn1E9PVA8 Gm8770-201ENSMUST00000121113 1109 ntBASIC18.18■□□□□ 0.5
Gcn1E9PVA8 Cxxc4-201ENSMUST00000166288 1290 ntAPPRIS ALT2 TSL 5 BASIC18.18■□□□□ 0.5
Gcn1E9PVA8 Gsk3a-202ENSMUST00000108411 2248 ntAPPRIS ALT2 TSL 5 BASIC18.18■□□□□ 0.5
Gcn1E9PVA8 Gxylt1-202ENSMUST00000057896 1891 ntAPPRIS ALT2 TSL 5 BASIC18.18■□□□□ 0.5
Gcn1E9PVA8 1700081N11Rik-202ENSMUST00000221447 569 ntTSL 3 BASIC18.18■□□□□ 0.5
Gcn1E9PVA8 Tmem53-201ENSMUST00000062824 991 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Gcn1E9PVA8 Wdr33-202ENSMUST00000082319 1152 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
Gcn1E9PVA8 Pdcd4-203ENSMUST00000165617 1806 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Gcn1E9PVA8 Kdelr3-201ENSMUST00000010974 1414 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Gcn1E9PVA8 Gpr137-202ENSMUST00000099774 1434 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
Gcn1E9PVA8 Krt8-ps-201ENSMUST00000208495 945 ntBASIC18.17■□□□□ 0.5
Gcn1E9PVA8 Cmc4-201ENSMUST00000033543 992 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Gcn1E9PVA8 Gm10812-201ENSMUST00000099864 546 ntBASIC18.17■□□□□ 0.5
Gcn1E9PVA8 Fam92a-202ENSMUST00000108285 1639 ntAPPRIS P3 TSL 5 BASIC18.17■□□□□ 0.5
Gcn1E9PVA8 1700003N22Rik-201ENSMUST00000194834 808 ntBASIC18.17■□□□□ 0.5
Gcn1E9PVA8 Ssx2ip-202ENSMUST00000106149 2416 ntAPPRIS ALT2 TSL 1 (best) BASIC18.17■□□□□ 0.5
Gcn1E9PVA8 Hpca-209ENSMUST00000164649 1626 ntAPPRIS P1 TSL 2 BASIC18.17■□□□□ 0.5
Gcn1E9PVA8 Ssu72-202ENSMUST00000105595 874 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
Gcn1E9PVA8 Gm9922-201ENSMUST00000066461 435 ntAPPRIS P1 BASIC18.16■□□□□ 0.5
Gcn1E9PVA8 Gmcl1-202ENSMUST00000113679 960 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
Gcn1E9PVA8 Specc1-215ENSMUST00000202744 674 ntTSL 3 BASIC18.16■□□□□ 0.5
Gcn1E9PVA8 Sc5d-202ENSMUST00000169609 1677 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Gcn1E9PVA8 Hsp25-ps1-201ENSMUST00000109187 630 ntBASIC18.16■□□□□ 0.5
Gcn1E9PVA8 Anapc1-202ENSMUST00000110332 1214 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
Gcn1E9PVA8 1810026B05Rik-205ENSMUST00000184855 409 ntTSL 3 BASIC18.16■□□□□ 0.5
Gcn1E9PVA8 Tmed10-201ENSMUST00000040766 1482 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Gcn1E9PVA8 Fam98c-203ENSMUST00000134176 1189 ntTSL 2 BASIC18.15■□□□□ 0.5
Gcn1E9PVA8 Hrh3-203ENSMUST00000164442 1242 ntAPPRIS ALT2 TSL 5 BASIC18.15■□□□□ 0.5
Gcn1E9PVA8 Gm11627-201ENSMUST00000107080 585 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Gcn1E9PVA8 Gm13168-201ENSMUST00000121771 632 ntBASIC18.15■□□□□ 0.5
Gcn1E9PVA8 Rab7-206ENSMUST00000203674 424 ntTSL 5 BASIC18.15■□□□□ 0.5
Gcn1E9PVA8 Lsm2-201ENSMUST00000007266 873 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
Gcn1E9PVA8 Rcor2-201ENSMUST00000066646 2801 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Retrieved 100 of 76,532 protein–RNA pairs in 13.4 ms