Protein–RNA interactions for Protein: A2ALU4

Shroom2, Protein Shroom2, mousemouse

Predictions only

Length 1,481 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Shroom2A2ALU4 Prdx5-201ENSMUST00000025904 1262 ntAPPRIS P2 TSL 1 (best) BASIC34.26■■■■□ 3.07
Shroom2A2ALU4 Zbtb11os1-201ENSMUST00000186480 1350 ntBASIC34.25■■■■□ 3.07
Shroom2A2ALU4 Isoc1-201ENSMUST00000025503 2563 ntAPPRIS P1 TSL 1 (best) BASIC34.25■■■■□ 3.07
Shroom2A2ALU4 Dbndd2-202ENSMUST00000069385 1658 ntAPPRIS P1 TSL 1 (best) BASIC34.25■■■■□ 3.07
Shroom2A2ALU4 Tsc22d1-203ENSMUST00000101618 1043 ntTSL 1 (best) BASIC34.25■■■■□ 3.07
Shroom2A2ALU4 Gucd1-211ENSMUST00000219774 806 ntTSL 3 BASIC34.25■■■■□ 3.07
Shroom2A2ALU4 AC122828.1-201ENSMUST00000220785 489 ntTSL 3 BASIC34.25■■■■□ 3.07
Shroom2A2ALU4 Dtnbp1-208ENSMUST00000222805 1231 ntTSL 1 (best) BASIC34.25■■■■□ 3.07
Shroom2A2ALU4 Gtsf1-201ENSMUST00000023129 819 ntAPPRIS P1 TSL 1 (best) BASIC34.25■■■■□ 3.07
Shroom2A2ALU4 Ankrd9-207ENSMUST00000148765 1431 ntAPPRIS P2 TSL 2 BASIC34.25■■■■□ 3.07
Shroom2A2ALU4 Vgll2-201ENSMUST00000058347 966 ntAPPRIS ALT2 TSL 1 (best) BASIC34.24■■■■□ 3.07
Shroom2A2ALU4 Mapk15-201ENSMUST00000089669 1929 ntAPPRIS P1 TSL 1 (best) BASIC34.24■■■■□ 3.07
Shroom2A2ALU4 Nfkbil1-201ENSMUST00000048994 1447 ntAPPRIS P1 TSL 1 (best) BASIC34.23■■■■□ 3.07
Shroom2A2ALU4 Sco2-201ENSMUST00000167643 1143 ntAPPRIS P1 TSL 1 (best) BASIC34.23■■■■□ 3.07
Shroom2A2ALU4 Grifin-201ENSMUST00000042993 613 ntAPPRIS P1 TSL 1 (best) BASIC34.23■■■■□ 3.07
Shroom2A2ALU4 Sc5d-202ENSMUST00000169609 1677 ntAPPRIS P1 TSL 1 (best) BASIC34.23■■■■□ 3.07
Shroom2A2ALU4 Tssk6-201ENSMUST00000050373 1335 ntAPPRIS P1 BASIC34.23■■■■□ 3.07
Shroom2A2ALU4 Olfr94-201ENSMUST00000055324 1304 ntAPPRIS P2 BASIC34.23■■■■□ 3.07
Shroom2A2ALU4 Kdelr3-201ENSMUST00000010974 1414 ntAPPRIS P1 TSL 1 (best) BASIC34.22■■■■□ 3.07
Shroom2A2ALU4 Tmem164-205ENSMUST00000112891 1654 ntTSL 5 BASIC34.22■■■■□ 3.07
Shroom2A2ALU4 Dnajc21-201ENSMUST00000136591 2060 ntAPPRIS P1 TSL 5 BASIC34.21■■■■□ 3.07
Shroom2A2ALU4 Ntsr2-201ENSMUST00000111064 1524 ntAPPRIS P1 TSL 1 (best) BASIC34.21■■■■□ 3.07
Shroom2A2ALU4 Pawr-201ENSMUST00000095313 1745 ntAPPRIS P2 TSL 1 (best) BASIC34.2■■■■□ 3.07
Shroom2A2ALU4 Tmem189-201ENSMUST00000006587 2329 ntAPPRIS P1 TSL 1 (best) BASIC34.2■■■■□ 3.06
Shroom2A2ALU4 Dpyd-204ENSMUST00000149101 531 ntTSL 3 BASIC34.2■■■■□ 3.06
Shroom2A2ALU4 Gm27801-201ENSMUST00000184174 223 ntBASIC34.2■■■■□ 3.06
Shroom2A2ALU4 Lgals3-201ENSMUST00000142734 1419 ntAPPRIS P1 TSL 1 (best) BASIC34.19■■■■□ 3.06
Shroom2A2ALU4 Ddx43-201ENSMUST00000113367 2207 ntAPPRIS P1 TSL 5 BASIC34.19■■■■□ 3.06
Shroom2A2ALU4 Ctsz-201ENSMUST00000016400 1441 ntAPPRIS P1 TSL 1 (best) BASIC34.19■■■■□ 3.06
Shroom2A2ALU4 Gm6085-201ENSMUST00000182774 1470 ntBASIC34.18■■■■□ 3.06
Shroom2A2ALU4 Ypel3-204ENSMUST00000106359 469 ntTSL 5 BASIC34.18■■■■□ 3.06
Shroom2A2ALU4 Gm44949-201ENSMUST00000206423 1450 ntBASIC34.18■■■■□ 3.06
Shroom2A2ALU4 AC122428.3-201ENSMUST00000215551 2290 ntBASIC34.17■■■■□ 3.06
Shroom2A2ALU4 Slc36a4-202ENSMUST00000115588 1745 ntAPPRIS ALT2 TSL 1 (best) BASIC34.16■■■■□ 3.06
Shroom2A2ALU4 1700030C10Rik-201ENSMUST00000110971 1471 ntBASIC34.15■■■■□ 3.06
Shroom2A2ALU4 1810010K12Rik-201ENSMUST00000070378 1324 ntBASIC34.15■■■■□ 3.06
Shroom2A2ALU4 Gm27151-202ENSMUST00000185015 1145 ntTSL 5 BASIC34.15■■■■□ 3.06
Shroom2A2ALU4 AC153524.1-201ENSMUST00000220436 1935 ntBASIC34.15■■■■□ 3.06
Shroom2A2ALU4 Gm40848-201ENSMUST00000221998 324 ntBASIC34.14■■■■□ 3.06
Shroom2A2ALU4 Ubp1-203ENSMUST00000116492 2111 ntAPPRIS ALT1 TSL 1 (best) BASIC34.14■■■■□ 3.06
Shroom2A2ALU4 AC117245.4-201ENSMUST00000217388 1646 ntBASIC34.14■■■■□ 3.06
Shroom2A2ALU4 Tk2-205ENSMUST00000212275 1507 ntAPPRIS P1 TSL 2 BASIC34.14■■■■□ 3.06
Shroom2A2ALU4 Rab3ip-203ENSMUST00000219109 1844 ntAPPRIS P1 TSL 1 (best) BASIC34.14■■■■□ 3.06
Shroom2A2ALU4 Dnajb2-206ENSMUST00000187058 1732 ntTSL 1 (best) BASIC34.13■■■■□ 3.05
Shroom2A2ALU4 Cnpy3-202ENSMUST00000121671 561 ntTSL 2 BASIC34.13■■■■□ 3.05
Shroom2A2ALU4 Jkamp-201ENSMUST00000057257 1292 ntAPPRIS P3 TSL 1 (best) BASIC34.13■■■■□ 3.05
Shroom2A2ALU4 Slc30a3-201ENSMUST00000031037 2089 ntAPPRIS P1 TSL 1 (best) BASIC34.13■■■■□ 3.05
Shroom2A2ALU4 Neurog2-201ENSMUST00000029587 2227 ntAPPRIS P1 TSL 1 (best) BASIC34.12■■■■□ 3.05
Shroom2A2ALU4 Emid1-208ENSMUST00000163299 1923 ntAPPRIS ALT2 TSL 5 BASIC34.12■■■■□ 3.05
Shroom2A2ALU4 Ferd3l-201ENSMUST00000061035 886 ntAPPRIS P1 BASIC34.12■■■■□ 3.05
Shroom2A2ALU4 Pdp1-201ENSMUST00000056050 1881 ntAPPRIS P3 TSL 5 BASIC34.12■■■■□ 3.05
Shroom2A2ALU4 Sdsl-201ENSMUST00000031594 1476 ntAPPRIS P1 TSL 1 (best) BASIC34.11■■■■□ 3.05
Shroom2A2ALU4 2310068J16Rik-201ENSMUST00000188271 1124 ntBASIC34.11■■■■□ 3.05
Shroom2A2ALU4 Gm7160-202ENSMUST00000188519 1027 ntBASIC34.11■■■■□ 3.05
Shroom2A2ALU4 Porcn-203ENSMUST00000089402 1839 ntAPPRIS ALT1 TSL 1 (best) BASIC34.11■■■■□ 3.05
Shroom2A2ALU4 Ltb4r2-201ENSMUST00000044554 1439 ntAPPRIS P1 TSL 1 (best) BASIC34.11■■■■□ 3.05
Shroom2A2ALU4 Cited2-201ENSMUST00000038107 1979 ntAPPRIS P1 TSL 1 (best) BASIC34.1■■■■□ 3.05
Shroom2A2ALU4 Cck-203ENSMUST00000215228 783 ntAPPRIS P1 TSL 1 (best) BASIC34.1■■■■□ 3.05
Shroom2A2ALU4 A230065N10Rik-201ENSMUST00000172178 1028 ntBASIC34.09■■■■□ 3.05
Shroom2A2ALU4 Timmdc1-201ENSMUST00000002925 1573 ntAPPRIS P1 TSL 1 (best) BASIC34.09■■■■□ 3.05
Shroom2A2ALU4 Rabac1-203ENSMUST00000205871 986 ntTSL 1 (best) BASIC34.08■■■■□ 3.05
Shroom2A2ALU4 Pitx3-201ENSMUST00000026259 1380 ntAPPRIS P1 TSL 1 (best) BASIC34.07■■■■□ 3.05
Shroom2A2ALU4 Actr3b-201ENSMUST00000088244 1712 ntAPPRIS P1 TSL 1 (best) BASIC34.07■■■■□ 3.04
Shroom2A2ALU4 Gm12441-201ENSMUST00000121806 588 ntBASIC34.07■■■■□ 3.04
Shroom2A2ALU4 Gm3264-202ENSMUST00000166776 882 ntAPPRIS ALT2 TSL 5 BASIC34.07■■■■□ 3.04
Shroom2A2ALU4 Klf13-204ENSMUST00000185175 487 ntTSL 2 BASIC34.07■■■■□ 3.04
Shroom2A2ALU4 Gm43759-201ENSMUST00000196925 1261 ntBASIC34.07■■■■□ 3.04
Shroom2A2ALU4 Gm22240-201ENSMUST00000175225 82 ntBASIC34.06■■■■□ 3.04
Shroom2A2ALU4 Krtcap3-205ENSMUST00000201625 902 ntAPPRIS P1 TSL 5 BASIC34.06■■■■□ 3.04
Shroom2A2ALU4 4930500M09Rik-202ENSMUST00000194988 1563 ntBASIC34.06■■■■□ 3.04
Shroom2A2ALU4 Mxra7-201ENSMUST00000021170 2063 ntAPPRIS P3 TSL 1 (best) BASIC34.05■■■■□ 3.04
Shroom2A2ALU4 Gm13063-201ENSMUST00000132247 669 ntTSL 3 BASIC34.05■■■■□ 3.04
Shroom2A2ALU4 Spr-202ENSMUST00000174286 775 ntTSL 2 BASIC34.05■■■■□ 3.04
Shroom2A2ALU4 Mrpl48-207ENSMUST00000146003 1625 ntTSL 1 (best) BASIC34.05■■■■□ 3.04
Shroom2A2ALU4 2410017I17Rik-202ENSMUST00000090537 2053 ntTSL 2 BASIC34.05■■■■□ 3.04
Shroom2A2ALU4 Cars2-201ENSMUST00000049461 1902 ntAPPRIS P1 TSL 1 (best) BASIC34.04■■■■□ 3.04
Shroom2A2ALU4 Stmn4-204ENSMUST00000121955 1361 ntTSL 5 BASIC34.04■■■■□ 3.04
Shroom2A2ALU4 Srsf1-202ENSMUST00000107920 1209 ntTSL 5 BASIC34.04■■■■□ 3.04
Shroom2A2ALU4 D630036H23Rik-201ENSMUST00000171007 940 ntAPPRIS P1 BASIC34.04■■■■□ 3.04
Shroom2A2ALU4 Txnrd2-216ENSMUST00000206606 1809 ntTSL 1 (best) BASIC34.04■■■■□ 3.04
Shroom2A2ALU4 Rbm34-203ENSMUST00000212618 1509 ntTSL 1 (best) BASIC34.03■■■■□ 3.04
Shroom2A2ALU4 Eda-204ENSMUST00000113777 1056 ntTSL 5 BASIC34.03■■■■□ 3.04
Shroom2A2ALU4 Sqstm1-205ENSMUST00000143379 1266 ntTSL 5 BASIC34.03■■■■□ 3.04
Shroom2A2ALU4 Ccdc84-211ENSMUST00000217270 681 ntTSL 1 (best) BASIC34.03■■■■□ 3.04
Shroom2A2ALU4 Eda-201ENSMUST00000071453 1152 ntTSL 1 (best) BASIC34.03■■■■□ 3.04
Shroom2A2ALU4 Ube2s-201ENSMUST00000079496 1238 ntAPPRIS P1 TSL 1 (best) BASIC34.03■■■■□ 3.04
Shroom2A2ALU4 1700086O06Rik-202ENSMUST00000181871 1564 ntTSL 1 (best) BASIC34.03■■■■□ 3.04
Shroom2A2ALU4 Paqr3-202ENSMUST00000112968 1875 ntTSL 1 (best) BASIC34.03■■■■□ 3.04
Shroom2A2ALU4 Reps1-206ENSMUST00000154718 2402 ntTSL 5 BASIC34.02■■■■□ 3.04
Shroom2A2ALU4 Ttc9-201ENSMUST00000036116 2042 ntAPPRIS P1 TSL 1 (best) BASIC34.02■■■■□ 3.04
Shroom2A2ALU4 Taz-208ENSMUST00000132437 768 ntTSL 3 BASIC34.01■■■■□ 3.04
Shroom2A2ALU4 Lrfn1-201ENSMUST00000055110 1479 ntAPPRIS P3 TSL 5 BASIC34.01■■■■□ 3.04
Shroom2A2ALU4 Fus-201ENSMUST00000077609 1831 ntAPPRIS ALT2 TSL 1 (best) BASIC34.01■■■■□ 3.04
Shroom2A2ALU4 Reep6-202ENSMUST00000105354 2208 ntAPPRIS P3 TSL 1 (best) BASIC34.01■■■■□ 3.03
Shroom2A2ALU4 Reep6-205ENSMUST00000105358 2208 ntTSL 1 (best) BASIC34.01■■■■□ 3.03
Shroom2A2ALU4 Gdf15-202ENSMUST00000110103 1380 ntAPPRIS P1 TSL 1 (best) BASIC34.01■■■■□ 3.03
Shroom2A2ALU4 AV026068-204ENSMUST00000186214 633 ntTSL 2 BASIC34.01■■■■□ 3.03
Shroom2A2ALU4 Cuta-201ENSMUST00000025027 639 ntAPPRIS P3 TSL 1 (best) BASIC34.01■■■■□ 3.03
Shroom2A2ALU4 Foxa2-202ENSMUST00000109964 2070 ntAPPRIS ALT2 TSL 1 (best) BASIC34■■■■□ 3.03
Shroom2A2ALU4 Arhgap27os2-201ENSMUST00000123812 1390 ntTSL 1 (best) BASIC34■■■■□ 3.03
Retrieved 100 of 76,532 protein–RNA pairs in 12.2 ms