Protein–RNA interactions for Protein: A1L3P4

Slc9a6, Sodium/hydrogen exchanger, mousemouse

Predictions only

Length 702 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Slc9a6A1L3P4 Vegfb-201ENSMUST00000025914 1281 ntAPPRIS P3 TSL 1 (best) BASIC19.63■□□□□ 0.73
Slc9a6A1L3P4 Mxi1-202ENSMUST00000025998 4996 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Slc9a6A1L3P4 Vstm4-201ENSMUST00000053175 2745 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Slc9a6A1L3P4 Tmem230-202ENSMUST00000110163 1551 ntAPPRIS P1 TSL 3 BASIC19.62■□□□□ 0.73
Slc9a6A1L3P4 Eif5a-208ENSMUST00000108611 1353 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Slc9a6A1L3P4 Dexi-201ENSMUST00000038281 1389 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Slc9a6A1L3P4 Zfp346-203ENSMUST00000159278 1253 ntAPPRIS ALT2 TSL 5 BASIC19.62■□□□□ 0.73
Slc9a6A1L3P4 Neurl1b-202ENSMUST00000182897 1231 ntTSL 5 BASIC19.62■□□□□ 0.73
Slc9a6A1L3P4 Whrn-208ENSMUST00000119294 2632 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
Slc9a6A1L3P4 Mpzl1-202ENSMUST00000111435 2285 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Slc9a6A1L3P4 Shisa5-201ENSMUST00000026737 1834 ntAPPRIS P3 TSL 1 (best) BASIC19.61■□□□□ 0.73
Slc9a6A1L3P4 Sin3b-202ENSMUST00000109950 1024 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
Slc9a6A1L3P4 Tmx4-202ENSMUST00000110119 596 ntTSL 2 BASIC19.61■□□□□ 0.73
Slc9a6A1L3P4 Irf2bp1-201ENSMUST00000053713 2734 ntAPPRIS P1 BASIC19.61■□□□□ 0.73
Slc9a6A1L3P4 Inhbb-201ENSMUST00000038765 4255 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Slc9a6A1L3P4 BC037034-201ENSMUST00000048421 2490 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Slc9a6A1L3P4 Gm28536-201ENSMUST00000190971 1317 ntBASIC19.6■□□□□ 0.73
Slc9a6A1L3P4 Chrna7-201ENSMUST00000032738 2078 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Slc9a6A1L3P4 Wipi1-203ENSMUST00000106689 1220 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
Slc9a6A1L3P4 Dpysl3-201ENSMUST00000025379 2106 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Slc9a6A1L3P4 Gm20431-201ENSMUST00000125544 2367 ntAPPRIS P1 TSL 5 BASIC19.59■□□□□ 0.73
Slc9a6A1L3P4 Kctd20-201ENSMUST00000057174 2368 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Slc9a6A1L3P4 Tmem132b-201ENSMUST00000031446 7995 ntAPPRIS P1 TSL 5 BASIC19.59■□□□□ 0.73
Slc9a6A1L3P4 Slc10a3-201ENSMUST00000037967 2023 ntAPPRIS P2 TSL 1 (best) BASIC19.59■□□□□ 0.73
Slc9a6A1L3P4 Nkx2-5-201ENSMUST00000015723 1525 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Slc9a6A1L3P4 Txnrd2-213ENSMUST00000178093 1785 ntTSL 5 BASIC19.59■□□□□ 0.73
Slc9a6A1L3P4 Nup153-201ENSMUST00000021803 6109 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Slc9a6A1L3P4 Hmbox1-204ENSMUST00000175905 1715 ntTSL 5 BASIC19.59■□□□□ 0.73
Slc9a6A1L3P4 Lipt2-201ENSMUST00000032967 1663 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Slc9a6A1L3P4 Notumos-201ENSMUST00000151998 2659 ntBASIC19.58■□□□□ 0.73
Slc9a6A1L3P4 Kcnip2-208ENSMUST00000161886 693 ntAPPRIS P3 TSL 1 (best) BASIC19.58■□□□□ 0.72
Slc9a6A1L3P4 Tmem192-203ENSMUST00000209852 1193 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
Slc9a6A1L3P4 Gm6217-201ENSMUST00000222182 829 ntAPPRIS P1 BASIC19.58■□□□□ 0.72
Slc9a6A1L3P4 Ak2-201ENSMUST00000030583 986 ntAPPRIS P4 TSL 1 (best) BASIC19.58■□□□□ 0.72
Slc9a6A1L3P4 Maf1-201ENSMUST00000023212 1686 ntAPPRIS P2 TSL 1 (best) BASIC19.58■□□□□ 0.72
Slc9a6A1L3P4 Tmem164-206ENSMUST00000112896 5224 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
Slc9a6A1L3P4 Auh-204ENSMUST00000120535 1647 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
Slc9a6A1L3P4 Gm26796-201ENSMUST00000181092 2276 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
Slc9a6A1L3P4 AC158990.1-201ENSMUST00000221450 2016 ntBASIC19.58■□□□□ 0.72
Slc9a6A1L3P4 Idh3a-205ENSMUST00000217484 2580 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
Slc9a6A1L3P4 Amn-201ENSMUST00000021707 1701 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Slc9a6A1L3P4 Tysnd1-201ENSMUST00000020284 2286 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Slc9a6A1L3P4 Gm11847-201ENSMUST00000125165 1119 ntBASIC19.57■□□□□ 0.72
Slc9a6A1L3P4 Gm2415-202ENSMUST00000134688 401 ntTSL 2 BASIC19.57■□□□□ 0.72
Slc9a6A1L3P4 1700051O22Rik-202ENSMUST00000195451 638 ntBASIC19.57■□□□□ 0.72
Slc9a6A1L3P4 Gm45444-201ENSMUST00000211394 898 ntBASIC19.57■□□□□ 0.72
Slc9a6A1L3P4 4833418N17Rik-201ENSMUST00000064826 615 ntBASIC19.57■□□□□ 0.72
Slc9a6A1L3P4 Hnrnpa3-201ENSMUST00000090792 1140 ntAPPRIS P3 TSL 5 BASIC19.57■□□□□ 0.72
Slc9a6A1L3P4 Phf12-202ENSMUST00000108360 3047 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
Slc9a6A1L3P4 Psip1-202ENSMUST00000107214 1973 ntTSL 5 BASIC19.57■□□□□ 0.72
Slc9a6A1L3P4 Sugct-201ENSMUST00000068545 1701 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Slc9a6A1L3P4 Slc35b3-209ENSMUST00000225432 2216 ntAPPRIS P3 BASIC19.56■□□□□ 0.72
Slc9a6A1L3P4 Kcnip1-203ENSMUST00000109340 1840 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
Slc9a6A1L3P4 Gtpbp6-201ENSMUST00000077220 1617 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Slc9a6A1L3P4 Gm12905-201ENSMUST00000153814 658 ntTSL 2 BASIC19.56■□□□□ 0.72
Slc9a6A1L3P4 Tmem147-203ENSMUST00000207296 875 ntTSL 3 BASIC19.56■□□□□ 0.72
Slc9a6A1L3P4 Coprs-201ENSMUST00000033839 793 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Slc9a6A1L3P4 Gm5921-201ENSMUST00000075898 882 ntBASIC19.56■□□□□ 0.72
Slc9a6A1L3P4 Trip10-207ENSMUST00000224947 2016 ntAPPRIS P2 BASIC19.56■□□□□ 0.72
Slc9a6A1L3P4 Sirt1-203ENSMUST00000120239 4430 ntAPPRIS P3 TSL 5 BASIC19.56■□□□□ 0.72
Slc9a6A1L3P4 Emc6-201ENSMUST00000054952 1332 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Slc9a6A1L3P4 Ezh2-203ENSMUST00000114616 2670 ntAPPRIS ALT1 TSL 5 BASIC19.55■□□□□ 0.72
Slc9a6A1L3P4 Ptpn12-201ENSMUST00000030556 3280 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Slc9a6A1L3P4 Atp5j-202ENSMUST00000114191 742 ntAPPRIS P1 TSL 5 BASIC19.55■□□□□ 0.72
Slc9a6A1L3P4 Tmem160-201ENSMUST00000019302 815 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Slc9a6A1L3P4 Homer2-201ENSMUST00000026922 1736 ntAPPRIS ALT2 TSL 1 (best) BASIC19.55■□□□□ 0.72
Slc9a6A1L3P4 Pdss1-207ENSMUST00000152170 1538 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
Slc9a6A1L3P4 Rufy1-201ENSMUST00000020643 2688 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Slc9a6A1L3P4 Fastk-201ENSMUST00000030800 1893 ntAPPRIS P2 TSL 1 (best) BASIC19.54■□□□□ 0.72
Slc9a6A1L3P4 Ubl4a-206ENSMUST00000155676 2442 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Slc9a6A1L3P4 Nrxn2-208ENSMUST00000137166 6314 ntAPPRIS ALT2 TSL 5 BASIC19.54■□□□□ 0.72
Slc9a6A1L3P4 Ddrgk1-201ENSMUST00000089559 1238 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Slc9a6A1L3P4 Slc9a7-202ENSMUST00000115393 2152 ntAPPRIS ALT2 TSL 1 (best) BASIC19.54■□□□□ 0.72
Slc9a6A1L3P4 5031439G07Rik-201ENSMUST00000047144 6845 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Slc9a6A1L3P4 Tmem55b-206ENSMUST00000161166 1445 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
Slc9a6A1L3P4 Cited1-202ENSMUST00000101336 1090 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Slc9a6A1L3P4 Hoxd11-202ENSMUST00000142312 1111 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Slc9a6A1L3P4 Rin3-207ENSMUST00000150795 937 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
Slc9a6A1L3P4 Vegfa-211ENSMUST00000167860 975 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
Slc9a6A1L3P4 Vegfa-213ENSMUST00000217017 1179 ntAPPRIS P4 TSL 1 (best) BASIC19.53■□□□□ 0.72
Slc9a6A1L3P4 Gm7544-201ENSMUST00000222426 828 ntAPPRIS P1 BASIC19.53■□□□□ 0.72
Slc9a6A1L3P4 Cnnm4-201ENSMUST00000153128 4547 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Slc9a6A1L3P4 Kti12-201ENSMUST00000102738 1629 ntAPPRIS P1 BASIC19.53■□□□□ 0.72
Slc9a6A1L3P4 Sec22c-202ENSMUST00000111560 2669 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Slc9a6A1L3P4 Rasa1-201ENSMUST00000109552 4563 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Slc9a6A1L3P4 Msx3-202ENSMUST00000172775 2070 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Slc9a6A1L3P4 Aurkb-202ENSMUST00000108666 1831 ntAPPRIS P1 TSL 5 BASIC19.53■□□□□ 0.72
Slc9a6A1L3P4 Tmem45b-201ENSMUST00000048050 1799 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Slc9a6A1L3P4 Pstpip1-201ENSMUST00000059206 1863 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Slc9a6A1L3P4 Mad2l2-201ENSMUST00000030860 1535 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Slc9a6A1L3P4 Gm16599-201ENSMUST00000148082 1182 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
Slc9a6A1L3P4 Stk19-201ENSMUST00000077477 1120 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Slc9a6A1L3P4 Setd4-201ENSMUST00000023669 1816 ntAPPRIS P1 TSL 5 BASIC19.52■□□□□ 0.72
Slc9a6A1L3P4 Hnrnpab-201ENSMUST00000074669 2370 ntAPPRIS P3 TSL 1 (best) BASIC19.52■□□□□ 0.72
Slc9a6A1L3P4 Lgr4-202ENSMUST00000111037 4988 ntTSL 5 BASIC19.52■□□□□ 0.72
Slc9a6A1L3P4 Gabbr1-209ENSMUST00000174456 1595 ntTSL 1 (best) BASIC19.52■□□□□ 0.71
Slc9a6A1L3P4 Olig3-201ENSMUST00000053225 2072 ntAPPRIS P1 BASIC19.52■□□□□ 0.71
Slc9a6A1L3P4 Sox2-201ENSMUST00000099151 2057 ntAPPRIS P1 BASIC19.52■□□□□ 0.71
Slc9a6A1L3P4 Ube2k-204ENSMUST00000201292 1529 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
Slc9a6A1L3P4 Rab28-201ENSMUST00000031011 1635 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Retrieved 100 of 76,532 protein–RNA pairs in 33.3 ms