Protein–RNA interactions for Protein: A0A1B0GSB3

Gm3880, Predicted pseudogene 3880, mousemouse

Predictions only

Length 72 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gm3880A0A1B0GSB3 Ccdc92-201ENSMUST00000036206 2473 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
Gm3880A0A1B0GSB3 Ahcyl2-202ENSMUST00000102995 5155 ntAPPRIS ALT1 TSL 5 BASIC10.48□□□□□ -0.73
Gm3880A0A1B0GSB3 B4galt5-201ENSMUST00000109221 4210 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
Gm3880A0A1B0GSB3 Klf15-201ENSMUST00000032174 2373 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
Gm3880A0A1B0GSB3 Babam2-209ENSMUST00000201352 1888 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
Gm3880A0A1B0GSB3 Gm38342-201ENSMUST00000195710 2980 ntBASIC10.48□□□□□ -0.73
Gm3880A0A1B0GSB3 Kif1c-205ENSMUST00000152618 1943 ntTSL 1 (best) BASIC10.48□□□□□ -0.73
Gm3880A0A1B0GSB3 Dhx15-201ENSMUST00000031061 3010 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
Gm3880A0A1B0GSB3 Trip10-207ENSMUST00000224947 2016 ntAPPRIS P2 BASIC10.47□□□□□ -0.73
Gm3880A0A1B0GSB3 Camk2d-228ENSMUST00000200171 5396 ntTSL 5 BASIC10.47□□□□□ -0.73
Gm3880A0A1B0GSB3 Zfc3h1-201ENSMUST00000036044 6957 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
Gm3880A0A1B0GSB3 Ints11-201ENSMUST00000030901 2368 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
Gm3880A0A1B0GSB3 Cpeb3-202ENSMUST00000123727 2411 ntAPPRIS ALT2 TSL 1 (best) BASIC10.47□□□□□ -0.73
Gm3880A0A1B0GSB3 Cbln2-201ENSMUST00000068423 2475 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
Gm3880A0A1B0GSB3 Runx2-203ENSMUST00000113572 6463 ntAPPRIS ALT2 TSL 1 (best) BASIC10.47□□□□□ -0.73
Gm3880A0A1B0GSB3 Shf-203ENSMUST00000110531 1557 ntAPPRIS P2 TSL 5 BASIC10.47□□□□□ -0.73
Gm3880A0A1B0GSB3 Dact2-201ENSMUST00000053218 2808 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
Gm3880A0A1B0GSB3 Klf3-201ENSMUST00000165536 5221 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
Gm3880A0A1B0GSB3 Ripor2-205ENSMUST00000110384 5608 ntAPPRIS ALT2 TSL 1 (best) BASIC10.47□□□□□ -0.73
Gm3880A0A1B0GSB3 Basp1-201ENSMUST00000058845 1855 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
Gm3880A0A1B0GSB3 Trim27-207ENSMUST00000223065 2046 ntTSL 1 (best) BASIC10.46□□□□□ -0.73
Gm3880A0A1B0GSB3 Zswim8-201ENSMUST00000022358 6073 ntAPPRIS P2 TSL 1 (best) BASIC10.46□□□□□ -0.73
Gm3880A0A1B0GSB3 Pkmyt1-201ENSMUST00000024701 2039 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.73
Gm3880A0A1B0GSB3 Raph1-201ENSMUST00000027168 2241 ntAPPRIS ALT2 TSL 5 BASIC10.46□□□□□ -0.73
Gm3880A0A1B0GSB3 Tbc1d25-204ENSMUST00000172020 2441 ntAPPRIS ALT2 TSL 1 (best) BASIC10.46□□□□□ -0.73
Gm3880A0A1B0GSB3 Gm43182-201ENSMUST00000199476 2528 ntBASIC10.46□□□□□ -0.73
Gm3880A0A1B0GSB3 Rnf44-204ENSMUST00000125871 4292 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.73
Gm3880A0A1B0GSB3 Dll3-201ENSMUST00000108315 2618 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.73
Gm3880A0A1B0GSB3 Plppr3-201ENSMUST00000092325 2766 ntAPPRIS P3 TSL 1 (best) BASIC10.46□□□□□ -0.73
Gm3880A0A1B0GSB3 Dusp8-201ENSMUST00000039926 4804 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.74
Gm3880A0A1B0GSB3 Nkx2-4-201ENSMUST00000067020 1725 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.74
Gm3880A0A1B0GSB3 Lor-201ENSMUST00000058150 1779 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.74
Gm3880A0A1B0GSB3 Cd37-204ENSMUST00000209779 2541 ntTSL 1 (best) BASIC10.46□□□□□ -0.74
Gm3880A0A1B0GSB3 Tal1-204ENSMUST00000162489 2894 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.74
Gm3880A0A1B0GSB3 Abcb10-201ENSMUST00000075578 4306 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.74
Gm3880A0A1B0GSB3 Adcy5-201ENSMUST00000114913 7007 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.74
Gm3880A0A1B0GSB3 Pkn1-201ENSMUST00000005616 6662 ntAPPRIS P3 TSL 1 (best) BASIC10.45□□□□□ -0.74
Gm3880A0A1B0GSB3 Gclm-201ENSMUST00000029769 5589 ntAPPRIS P1 TSL 1 (best) BASIC10.45□□□□□ -0.74
Gm3880A0A1B0GSB3 Xrcc6-202ENSMUST00000100399 3296 ntAPPRIS P1 TSL 1 (best) BASIC10.45□□□□□ -0.74
Gm3880A0A1B0GSB3 Gm20431-201ENSMUST00000125544 2367 ntAPPRIS P1 TSL 5 BASIC10.45□□□□□ -0.74
Gm3880A0A1B0GSB3 Anapc5-208ENSMUST00000197719 2383 ntAPPRIS ALT2 TSL 1 (best) BASIC10.45□□□□□ -0.74
Gm3880A0A1B0GSB3 Clasp2-211ENSMUST00000216817 2234 ntTSL 1 (best) BASIC10.45□□□□□ -0.74
Gm3880A0A1B0GSB3 Ube2m-201ENSMUST00000005714 1472 ntAPPRIS P1 TSL 1 (best) BASIC10.45□□□□□ -0.74
Gm3880A0A1B0GSB3 Xiap-203ENSMUST00000115094 6542 ntAPPRIS P1 TSL 5 BASIC10.45□□□□□ -0.74
Gm3880A0A1B0GSB3 Fam120c-201ENSMUST00000073364 5463 ntAPPRIS P1 TSL 1 (best) BASIC10.45□□□□□ -0.74
Gm3880A0A1B0GSB3 Cdkl3-204ENSMUST00000109077 2605 ntAPPRIS ALT2 TSL 5 BASIC10.45□□□□□ -0.74
Gm3880A0A1B0GSB3 Trmt61a-202ENSMUST00000168338 2131 ntAPPRIS P1 TSL 5 BASIC10.45□□□□□ -0.74
Gm3880A0A1B0GSB3 Galnt13-203ENSMUST00000112635 7531 ntAPPRIS P1 TSL 1 (best) BASIC10.44□□□□□ -0.74
Gm3880A0A1B0GSB3 Cpsf4-205ENSMUST00000160629 1713 ntAPPRIS ALT1 TSL 1 (best) BASIC10.44□□□□□ -0.74
Gm3880A0A1B0GSB3 Spry1-202ENSMUST00000108107 2773 ntAPPRIS P1 TSL 1 (best) BASIC10.44□□□□□ -0.74
Gm3880A0A1B0GSB3 Rab1a-203ENSMUST00000109602 2626 ntTSL 5 BASIC10.44□□□□□ -0.74
Gm3880A0A1B0GSB3 Appl1-201ENSMUST00000036570 7642 ntAPPRIS P1 TSL 1 (best) BASIC10.44□□□□□ -0.74
Gm3880A0A1B0GSB3 Paqr9-201ENSMUST00000079597 8367 ntAPPRIS P1 BASIC10.44□□□□□ -0.74
Gm3880A0A1B0GSB3 Tmem132c-201ENSMUST00000119026 5134 ntAPPRIS P1 TSL 1 (best) BASIC10.44□□□□□ -0.74
Gm3880A0A1B0GSB3 Galnt1-206ENSMUST00000170243 4108 ntAPPRIS P1 TSL 1 (best) BASIC10.44□□□□□ -0.74
Gm3880A0A1B0GSB3 Mbnl3-203ENSMUST00000114876 2243 ntAPPRIS P2 TSL 1 (best) BASIC10.44□□□□□ -0.74
Gm3880A0A1B0GSB3 Gpr160-202ENSMUST00000108258 2139 ntAPPRIS P1 TSL 1 (best) BASIC10.44□□□□□ -0.74
Gm3880A0A1B0GSB3 Fmr1-201ENSMUST00000088546 4409 ntTSL 1 (best) BASIC10.44□□□□□ -0.74
Gm3880A0A1B0GSB3 Bmp2k-201ENSMUST00000035635 7387 ntAPPRIS P1 TSL 1 (best) BASIC10.44□□□□□ -0.74
Gm3880A0A1B0GSB3 Espnl-201ENSMUST00000088904 5445 ntAPPRIS P1 TSL 1 (best) BASIC10.44□□□□□ -0.74
Gm3880A0A1B0GSB3 Siah2-201ENSMUST00000070368 2511 ntAPPRIS P1 TSL 1 (best) BASIC10.44□□□□□ -0.74
Gm3880A0A1B0GSB3 Pde1b-201ENSMUST00000023132 3218 ntAPPRIS P2 TSL 1 (best) BASIC10.44□□□□□ -0.74
Gm3880A0A1B0GSB3 Tle4-202ENSMUST00000167776 4545 ntAPPRIS ALT1 TSL 5 BASIC10.44□□□□□ -0.74
Gm3880A0A1B0GSB3 Nckap5los-201ENSMUST00000159738 1712 ntTSL 2 BASIC10.44□□□□□ -0.74
Gm3880A0A1B0GSB3 Rims3-201ENSMUST00000071093 6505 ntAPPRIS P1 TSL 1 (best) BASIC10.44□□□□□ -0.74
Gm3880A0A1B0GSB3 Negr1-202ENSMUST00000074015 4983 ntAPPRIS P1 TSL 1 (best) BASIC10.44□□□□□ -0.74
Gm3880A0A1B0GSB3 Bhlhe41-201ENSMUST00000032386 6133 ntAPPRIS P1 TSL 1 (best) BASIC10.44□□□□□ -0.74
Gm3880A0A1B0GSB3 D030062O11Rik-201ENSMUST00000192660 2806 ntBASIC10.43□□□□□ -0.74
Gm3880A0A1B0GSB3 Rell2-210ENSMUST00000176104 2150 ntAPPRIS P1 TSL 5 BASIC10.43□□□□□ -0.74
Gm3880A0A1B0GSB3 Rasgef1a-201ENSMUST00000164960 3284 ntAPPRIS ALT2 TSL 5 BASIC10.43□□□□□ -0.74
Gm3880A0A1B0GSB3 Cadps2-212ENSMUST00000163871 4969 ntAPPRIS ALT2 TSL 5 BASIC10.43□□□□□ -0.74
Gm3880A0A1B0GSB3 Stk35-202ENSMUST00000166282 5445 ntTSL 1 (best) BASIC10.43□□□□□ -0.74
Gm3880A0A1B0GSB3 Glrb-201ENSMUST00000029654 3029 ntAPPRIS P1 TSL 1 (best) BASIC10.43□□□□□ -0.74
Gm3880A0A1B0GSB3 Kcnn2-203ENSMUST00000169783 1625 ntTSL 1 (best) BASIC10.43□□□□□ -0.74
Gm3880A0A1B0GSB3 Lrrc38-201ENSMUST00000052458 2324 ntAPPRIS P1 TSL 1 (best) BASIC10.42□□□□□ -0.74
Gm3880A0A1B0GSB3 Tmpo-203ENSMUST00000092219 1854 ntTSL 1 (best) BASIC10.42□□□□□ -0.74
Gm3880A0A1B0GSB3 Snx5-202ENSMUST00000110030 2512 ntAPPRIS P1 TSL 1 (best) BASIC10.42□□□□□ -0.74
Gm3880A0A1B0GSB3 Grm2-203ENSMUST00000201681 2111 ntTSL 1 (best) BASIC10.42□□□□□ -0.74
Gm3880A0A1B0GSB3 Etv6-201ENSMUST00000081028 5545 ntAPPRIS P1 TSL 2 BASIC10.42□□□□□ -0.74
Gm3880A0A1B0GSB3 Prdm13-202ENSMUST00000095141 3173 ntAPPRIS P2 TSL 2 BASIC10.42□□□□□ -0.74
Gm3880A0A1B0GSB3 Gm5814-201ENSMUST00000177586 378 ntAPPRIS P1 BASIC10.42□□□□□ -0.74
Gm3880A0A1B0GSB3 Sart1-201ENSMUST00000044207 5091 ntAPPRIS P1 TSL 1 (best) BASIC10.42□□□□□ -0.74
Gm3880A0A1B0GSB3 Rasgef1c-203ENSMUST00000093142 2216 ntAPPRIS P3 TSL 1 (best) BASIC10.42□□□□□ -0.74
Gm3880A0A1B0GSB3 Porcn-201ENSMUST00000077595 1872 ntAPPRIS P4 TSL 1 (best) BASIC10.42□□□□□ -0.74
Gm3880A0A1B0GSB3 Porcn-204ENSMUST00000089403 1854 ntAPPRIS ALT1 TSL 1 (best) BASIC10.42□□□□□ -0.74
Gm3880A0A1B0GSB3 Zfp512b-201ENSMUST00000108789 5714 ntAPPRIS P1 TSL 1 (best) BASIC10.42□□□□□ -0.74
Gm3880A0A1B0GSB3 Zfp821-201ENSMUST00000034163 2127 ntAPPRIS P1 TSL 1 (best) BASIC10.42□□□□□ -0.74
Gm3880A0A1B0GSB3 Mta3-201ENSMUST00000067826 2087 ntAPPRIS P3 TSL 1 (best) BASIC10.42□□□□□ -0.74
Gm3880A0A1B0GSB3 Ralgapa1-202ENSMUST00000110687 7874 ntAPPRIS P2 TSL 1 (best) BASIC10.41□□□□□ -0.74
Gm3880A0A1B0GSB3 Gm7334-201ENSMUST00000061681 1356 ntAPPRIS P1 BASIC10.41□□□□□ -0.74
Gm3880A0A1B0GSB3 Ppp1r21-201ENSMUST00000038551 3141 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
Gm3880A0A1B0GSB3 Cnbp-208ENSMUST00000204653 2175 ntTSL 1 (best) BASIC10.41□□□□□ -0.74
Gm3880A0A1B0GSB3 Cnbp-201ENSMUST00000032138 2178 ntTSL 1 (best) BASIC10.41□□□□□ -0.74
Gm3880A0A1B0GSB3 Gm45580-201ENSMUST00000210430 889 ntTSL 5 BASIC10.41□□□□□ -0.74
Gm3880A0A1B0GSB3 Mafa-201ENSMUST00000062002 1080 ntAPPRIS P1 BASIC10.41□□□□□ -0.74
Gm3880A0A1B0GSB3 Ppm1e-201ENSMUST00000055438 6344 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
Gm3880A0A1B0GSB3 Itpripl2-201ENSMUST00000178344 6865 ntAPPRIS P1 BASIC10.41□□□□□ -0.74
Gm3880A0A1B0GSB3 Npas1-201ENSMUST00000002053 2091 ntAPPRIS P1 TSL 5 BASIC10.41□□□□□ -0.74
Gm3880A0A1B0GSB3 Gm20387-201ENSMUST00000173609 1783 ntTSL 1 (best) BASIC10.41□□□□□ -0.74
Gm3880A0A1B0GSB3 Vps37a-201ENSMUST00000098817 6379 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
Retrieved 100 of 76,532 protein–RNA pairs in 14.2 ms