Protein–RNA interactions for Protein: A0A140T8N1

Igkv1-88, Immunoglobulin kappa chain variable 1-88 (Fragment), mousemouse

Predictions only

Length 120 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Igkv1-88A0A140T8N1 Gm44428-201ENSMUST00000204474 874 ntBASIC13.75□□□□□ -0.21
Igkv1-88A0A140T8N1 Gm26776-201ENSMUST00000180479 1872 ntTSL 5 BASIC13.75□□□□□ -0.21
Igkv1-88A0A140T8N1 Ints6-201ENSMUST00000053959 4993 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Igkv1-88A0A140T8N1 Ccnjl-201ENSMUST00000050574 2672 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Igkv1-88A0A140T8N1 Fmnl2-203ENSMUST00000090952 5414 ntAPPRIS P1 TSL 5 BASIC13.74□□□□□ -0.21
Igkv1-88A0A140T8N1 Sec24b-201ENSMUST00000001079 5128 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Igkv1-88A0A140T8N1 Hsd11b2-201ENSMUST00000034363 1840 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Igkv1-88A0A140T8N1 Mbnl3-203ENSMUST00000114876 2243 ntAPPRIS P2 TSL 1 (best) BASIC13.74□□□□□ -0.21
Igkv1-88A0A140T8N1 Tmem164-205ENSMUST00000112891 1654 ntTSL 5 BASIC13.74□□□□□ -0.21
Igkv1-88A0A140T8N1 Gm37415-201ENSMUST00000192265 2054 ntBASIC13.74□□□□□ -0.21
Igkv1-88A0A140T8N1 Olig3-201ENSMUST00000053225 2072 ntAPPRIS P1 BASIC13.74□□□□□ -0.21
Igkv1-88A0A140T8N1 Smarcc1-207ENSMUST00000199896 5773 ntAPPRIS ALT2 TSL 1 (best) BASIC13.74□□□□□ -0.21
Igkv1-88A0A140T8N1 Retreg2-208ENSMUST00000190240 2438 ntAPPRIS ALT2 TSL 1 (best) BASIC13.74□□□□□ -0.21
Igkv1-88A0A140T8N1 Camsap2-201ENSMUST00000048309 7823 ntAPPRIS P3 TSL 5 BASIC13.74□□□□□ -0.21
Igkv1-88A0A140T8N1 Dlg3-204ENSMUST00000113736 4940 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
Igkv1-88A0A140T8N1 Mtcl1-202ENSMUST00000097291 7274 ntAPPRIS ALT2 TSL 1 (best) BASIC13.73□□□□□ -0.21
Igkv1-88A0A140T8N1 Gpr162-201ENSMUST00000046893 2676 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Igkv1-88A0A140T8N1 Dlg1-202ENSMUST00000064477 4663 ntAPPRIS P3 TSL 1 (best) BASIC13.73□□□□□ -0.21
Igkv1-88A0A140T8N1 Cdc16-201ENSMUST00000043962 2301 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Igkv1-88A0A140T8N1 Stradb-202ENSMUST00000114296 1348 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
Igkv1-88A0A140T8N1 Vamp4-206ENSMUST00000150040 901 ntAPPRIS P1 TSL 5 BASIC13.73□□□□□ -0.21
Igkv1-88A0A140T8N1 Rpl31-203ENSMUST00000179954 630 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Igkv1-88A0A140T8N1 Gm39157-201ENSMUST00000212322 1180 ntTSL 5 BASIC13.73□□□□□ -0.21
Igkv1-88A0A140T8N1 Dcaf5-201ENSMUST00000054145 5706 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Igkv1-88A0A140T8N1 Morf4l1-201ENSMUST00000085248 1882 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
Igkv1-88A0A140T8N1 Ptgfrn-201ENSMUST00000102694 5902 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Igkv1-88A0A140T8N1 Ewsr1-205ENSMUST00000102930 2174 ntAPPRIS ALT2 TSL 5 BASIC13.73□□□□□ -0.21
Igkv1-88A0A140T8N1 Plk5-202ENSMUST00000105351 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC13.73□□□□□ -0.21
Igkv1-88A0A140T8N1 Taf4b-201ENSMUST00000169862 5149 ntAPPRIS P1 TSL 5 BASIC13.73□□□□□ -0.21
Igkv1-88A0A140T8N1 Spns2-201ENSMUST00000045303 3241 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Igkv1-88A0A140T8N1 Whrn-208ENSMUST00000119294 2632 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
Igkv1-88A0A140T8N1 Hhipl1-201ENSMUST00000021685 5174 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Igkv1-88A0A140T8N1 Kl-201ENSMUST00000078856 5118 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Igkv1-88A0A140T8N1 Ltb4r1-201ENSMUST00000057569 1394 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Igkv1-88A0A140T8N1 Itgb4-210ENSMUST00000169928 6160 ntAPPRIS P2 TSL 5 BASIC13.72□□□□□ -0.21
Igkv1-88A0A140T8N1 Srsf2-206ENSMUST00000190993 1326 ntAPPRIS P1 TSL 2 BASIC13.72□□□□□ -0.21
Igkv1-88A0A140T8N1 Ptpn18-201ENSMUST00000027302 1559 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Igkv1-88A0A140T8N1 Slc35a2-211ENSMUST00000208640 486 ntTSL 5 BASIC13.72□□□□□ -0.21
Igkv1-88A0A140T8N1 AC117769.4-201ENSMUST00000225679 685 ntBASIC13.72□□□□□ -0.21
Igkv1-88A0A140T8N1 Crct1-201ENSMUST00000029521 718 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Igkv1-88A0A140T8N1 Raph1-201ENSMUST00000027168 2241 ntAPPRIS ALT2 TSL 5 BASIC13.72□□□□□ -0.21
Igkv1-88A0A140T8N1 Hmbox1-204ENSMUST00000175905 1715 ntTSL 5 BASIC13.72□□□□□ -0.21
Igkv1-88A0A140T8N1 Mfsd6-205ENSMUST00000156876 4932 ntAPPRIS P4 TSL 5 BASIC13.72□□□□□ -0.21
Igkv1-88A0A140T8N1 Gm10125-205ENSMUST00000161921 1463 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
Igkv1-88A0A140T8N1 Tmem263-201ENSMUST00000095383 3616 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Igkv1-88A0A140T8N1 Zfp36l1-202ENSMUST00000165114 1934 ntAPPRIS P1 TSL 5 BASIC13.72□□□□□ -0.21
Igkv1-88A0A140T8N1 Tmem121b-201ENSMUST00000178687 4869 ntAPPRIS P1 BASIC13.72□□□□□ -0.21
Igkv1-88A0A140T8N1 Qdpr-201ENSMUST00000015950 1380 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Igkv1-88A0A140T8N1 Zbtb7a-201ENSMUST00000048128 5938 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Igkv1-88A0A140T8N1 Arhgap9-204ENSMUST00000219511 2217 ntAPPRIS ALT2 TSL 1 (best) BASIC13.71□□□□□ -0.21
Igkv1-88A0A140T8N1 Frat1-201ENSMUST00000087155 2614 ntAPPRIS P1 BASIC13.71□□□□□ -0.21
Igkv1-88A0A140T8N1 Csnk2a2-203ENSMUST00000212214 6779 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Igkv1-88A0A140T8N1 Six5-201ENSMUST00000049454 3007 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Igkv1-88A0A140T8N1 Wnt5b-204ENSMUST00000178696 2371 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Igkv1-88A0A140T8N1 Gm45869-201ENSMUST00000210335 1704 ntTSL 5 BASIC13.71□□□□□ -0.21
Igkv1-88A0A140T8N1 Gpr160-202ENSMUST00000108258 2139 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Igkv1-88A0A140T8N1 Gm15918-201ENSMUST00000137259 689 ntTSL 3 BASIC13.71□□□□□ -0.21
Igkv1-88A0A140T8N1 Pcbd2-201ENSMUST00000021958 544 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
Igkv1-88A0A140T8N1 Aktip-205ENSMUST00000125257 2079 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Igkv1-88A0A140T8N1 Rufy1-201ENSMUST00000020643 2688 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
Igkv1-88A0A140T8N1 Unc13a-208ENSMUST00000177517 5654 ntAPPRIS ALT2 TSL 5 BASIC13.71□□□□□ -0.22
Igkv1-88A0A140T8N1 Pink1-203ENSMUST00000105817 1711 ntAPPRIS ALT2 TSL 5 BASIC13.7□□□□□ -0.22
Igkv1-88A0A140T8N1 Ppp1r14c-201ENSMUST00000043374 2617 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Igkv1-88A0A140T8N1 Nlgn2-202ENSMUST00000108634 5568 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Igkv1-88A0A140T8N1 Efhd1os-201ENSMUST00000138844 332 ntTSL 3 BASIC13.7□□□□□ -0.22
Igkv1-88A0A140T8N1 Gpr25-201ENSMUST00000086395 1077 ntAPPRIS P1 BASIC13.7□□□□□ -0.22
Igkv1-88A0A140T8N1 Map4k4-202ENSMUST00000168431 5632 ntAPPRIS ALT2 TSL 5 BASIC13.7□□□□□ -0.22
Igkv1-88A0A140T8N1 Mtcl1-201ENSMUST00000086693 7221 ntAPPRIS P3 TSL 1 (best) BASIC13.7□□□□□ -0.22
Igkv1-88A0A140T8N1 Nle1-201ENSMUST00000103213 1783 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Igkv1-88A0A140T8N1 Tmem45b-201ENSMUST00000048050 1799 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Igkv1-88A0A140T8N1 Nt5dc3-201ENSMUST00000099396 5952 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Igkv1-88A0A140T8N1 Slc35b2-205ENSMUST00000224905 1906 ntAPPRIS P1 BASIC13.7□□□□□ -0.22
Igkv1-88A0A140T8N1 Itsn1-206ENSMUST00000113999 5393 ntTSL 5 BASIC13.7□□□□□ -0.22
Igkv1-88A0A140T8N1 Gm10837-201ENSMUST00000100294 1536 ntAPPRIS P1 BASIC13.69□□□□□ -0.22
Igkv1-88A0A140T8N1 Strn3-201ENSMUST00000013130 3046 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Igkv1-88A0A140T8N1 Fkbp8-201ENSMUST00000075491 1698 ntAPPRIS P4 TSL 1 (best) BASIC13.69□□□□□ -0.22
Igkv1-88A0A140T8N1 Slc9a7-202ENSMUST00000115393 2152 ntAPPRIS ALT2 TSL 1 (best) BASIC13.69□□□□□ -0.22
Igkv1-88A0A140T8N1 Ptprf-201ENSMUST00000049074 7656 ntAPPRIS P1 TSL 5 BASIC13.69□□□□□ -0.22
Igkv1-88A0A140T8N1 Mtmr1-202ENSMUST00000114601 4640 ntAPPRIS ALT2 TSL 5 BASIC13.69□□□□□ -0.22
Igkv1-88A0A140T8N1 4930526A20Rik-202ENSMUST00000142461 1628 ntBASIC13.69□□□□□ -0.22
Igkv1-88A0A140T8N1 Btbd19-209ENSMUST00000183310 1620 ntAPPRIS P1 TSL 5 BASIC13.69□□□□□ -0.22
Igkv1-88A0A140T8N1 Slc50a1-201ENSMUST00000029565 1022 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Igkv1-88A0A140T8N1 Tmem192-202ENSMUST00000079896 916 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Igkv1-88A0A140T8N1 Zfp282-201ENSMUST00000061890 5573 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Igkv1-88A0A140T8N1 Zfp706-201ENSMUST00000078976 4417 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Igkv1-88A0A140T8N1 Ccdc6-203ENSMUST00000147545 5511 ntAPPRIS P1 TSL 5 BASIC13.69□□□□□ -0.22
Igkv1-88A0A140T8N1 Dvl3-201ENSMUST00000003318 2498 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Igkv1-88A0A140T8N1 Pkp4-210ENSMUST00000168631 4484 ntAPPRIS ALT1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Igkv1-88A0A140T8N1 Ppa2-203ENSMUST00000122334 1368 ntAPPRIS ALT2 TSL 1 (best) BASIC13.69□□□□□ -0.22
Igkv1-88A0A140T8N1 Crebbp-201ENSMUST00000023165 10820 ntAPPRIS P2 TSL 1 (best) BASIC13.69□□□□□ -0.22
Igkv1-88A0A140T8N1 Gm42418-201ENSMUST00000182010 1831 ntBASIC13.69□□□□□ -0.22
Igkv1-88A0A140T8N1 Npr3-205ENSMUST00000228603 2437 ntAPPRIS ALT2 BASIC13.69□□□□□ -0.22
Igkv1-88A0A140T8N1 Fgf16-201ENSMUST00000033581 1645 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Igkv1-88A0A140T8N1 Usp2-206ENSMUST00000176416 1486 ntAPPRIS ALT2 TSL 1 (best) BASIC13.68□□□□□ -0.22
Igkv1-88A0A140T8N1 Lrrc58-201ENSMUST00000078717 8604 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Igkv1-88A0A140T8N1 Scarna2-201ENSMUST00000157560 414 ntBASIC13.68□□□□□ -0.22
Igkv1-88A0A140T8N1 Chtf8-205ENSMUST00000176515 694 ntTSL 2 BASIC13.68□□□□□ -0.22
Igkv1-88A0A140T8N1 Rfng-201ENSMUST00000026156 2118 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Igkv1-88A0A140T8N1 Dcun1d5-201ENSMUST00000034499 1122 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Igkv1-88A0A140T8N1 Id3-201ENSMUST00000008016 1278 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Retrieved 100 of 76,532 protein–RNA pairs in 41.9 ms