Protein–RNA interactions for Protein: A0A140LIT1

Ccdc194, Coiled-coil domain-containing protein 194, mousemouse

Predictions only

Length 234 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc194A0A140LIT1 Kcnip1-203ENSMUST00000109340 1840 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
Ccdc194A0A140LIT1 Mbd3-203ENSMUST00000105348 1222 ntTSL 5 BASIC20.76■□□□□ 0.91
Ccdc194A0A140LIT1 Eif4e2-204ENSMUST00000113231 1119 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
Ccdc194A0A140LIT1 Arhgap39-204ENSMUST00000176219 542 ntTSL 5 BASIC20.76■□□□□ 0.91
Ccdc194A0A140LIT1 Gpr137c-207ENSMUST00000227086 4997 ntAPPRIS ALT2 BASIC20.76■□□□□ 0.91
Ccdc194A0A140LIT1 Dus1l-209ENSMUST00000167023 1909 ntAPPRIS P2 TSL 1 (best) BASIC20.76■□□□□ 0.91
Ccdc194A0A140LIT1 Dus1l-201ENSMUST00000026151 1930 ntAPPRIS ALT2 TSL 5 BASIC20.76■□□□□ 0.91
Ccdc194A0A140LIT1 Slc9a7-202ENSMUST00000115393 2152 ntAPPRIS ALT2 TSL 1 (best) BASIC20.76■□□□□ 0.91
Ccdc194A0A140LIT1 Zc3h6-201ENSMUST00000110319 1484 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
Ccdc194A0A140LIT1 Nkx2-2-201ENSMUST00000067075 2120 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Ccdc194A0A140LIT1 Rnf187-201ENSMUST00000094151 1949 ntAPPRIS ALT2 TSL 1 (best) BASIC20.75■□□□□ 0.91
Ccdc194A0A140LIT1 1700051O22Rik-202ENSMUST00000195451 638 ntBASIC20.75■□□□□ 0.91
Ccdc194A0A140LIT1 Aurkb-202ENSMUST00000108666 1831 ntAPPRIS P1 TSL 5 BASIC20.75■□□□□ 0.91
Ccdc194A0A140LIT1 AC164883.3-201ENSMUST00000227396 1774 ntBASIC20.74■□□□□ 0.91
Ccdc194A0A140LIT1 Rgs6-202ENSMUST00000161801 2141 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
Ccdc194A0A140LIT1 Dok6-201ENSMUST00000097495 1441 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Ccdc194A0A140LIT1 Snapin-203ENSMUST00000149884 1928 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Ccdc194A0A140LIT1 Mettl24-201ENSMUST00000058747 1529 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Ccdc194A0A140LIT1 Zfp36l1-202ENSMUST00000165114 1934 ntAPPRIS P1 TSL 5 BASIC20.73■□□□□ 0.91
Ccdc194A0A140LIT1 Ybx2-205ENSMUST00000149194 1235 ntTSL 5 BASIC20.73■□□□□ 0.91
Ccdc194A0A140LIT1 Gm27253-201ENSMUST00000183670 367 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
Ccdc194A0A140LIT1 Trappc6b-207ENSMUST00000218686 785 ntTSL 3 BASIC20.73■□□□□ 0.91
Ccdc194A0A140LIT1 AC161180.1-201ENSMUST00000223439 933 ntAPPRIS P1 BASIC20.73■□□□□ 0.91
Ccdc194A0A140LIT1 H1fx-201ENSMUST00000056403 1217 ntAPPRIS P1 BASIC20.73■□□□□ 0.91
Ccdc194A0A140LIT1 Serp2-201ENSMUST00000064517 748 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Ccdc194A0A140LIT1 A230052G05Rik-201ENSMUST00000050921 2302 ntBASIC20.73■□□□□ 0.91
Ccdc194A0A140LIT1 Picalm-212ENSMUST00000208730 3427 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
Ccdc194A0A140LIT1 Dynll1-201ENSMUST00000009157 2030 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Ccdc194A0A140LIT1 Acsl6-209ENSMUST00000108904 2594 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
Ccdc194A0A140LIT1 Ttc39c-201ENSMUST00000025294 2571 ntAPPRIS P2 TSL 1 (best) BASIC20.73■□□□□ 0.91
Ccdc194A0A140LIT1 Txnrd2-213ENSMUST00000178093 1785 ntTSL 5 BASIC20.72■□□□□ 0.91
Ccdc194A0A140LIT1 Ubl7-208ENSMUST00000216841 1426 ntAPPRIS P1 TSL 5 BASIC20.72■□□□□ 0.91
Ccdc194A0A140LIT1 Becn1-216ENSMUST00000170502 725 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
Ccdc194A0A140LIT1 Ppp2r3d-202ENSMUST00000180270 450 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
Ccdc194A0A140LIT1 Aldoa-214ENSMUST00000207534 741 ntAPPRIS P1 TSL 5 BASIC20.72■□□□□ 0.91
Ccdc194A0A140LIT1 Lipt2-201ENSMUST00000032967 1663 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Ccdc194A0A140LIT1 Dvl3-201ENSMUST00000003318 2498 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Ccdc194A0A140LIT1 Pde7a-202ENSMUST00000099195 6298 ntAPPRIS ALT1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Ccdc194A0A140LIT1 Auh-204ENSMUST00000120535 1647 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
Ccdc194A0A140LIT1 Aebp2-203ENSMUST00000095350 2575 ntAPPRIS ALT2 TSL 1 (best) BASIC20.71■□□□□ 0.91
Ccdc194A0A140LIT1 Mgat5b-201ENSMUST00000103027 4258 ntAPPRIS P1 TSL 5 BASIC20.7■□□□□ 0.9
Ccdc194A0A140LIT1 Abhd12-201ENSMUST00000056149 1999 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Ccdc194A0A140LIT1 Ube4b-202ENSMUST00000103212 5626 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Ccdc194A0A140LIT1 Cers5-201ENSMUST00000023762 2096 ntAPPRIS P2 TSL 1 (best) BASIC20.7■□□□□ 0.9
Ccdc194A0A140LIT1 Mad2l2-201ENSMUST00000030860 1535 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Ccdc194A0A140LIT1 Cnnm1-202ENSMUST00000223787 2931 ntAPPRIS ALT2 BASIC20.7■□□□□ 0.9
Ccdc194A0A140LIT1 Fance-204ENSMUST00000114804 1842 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
Ccdc194A0A140LIT1 Krt8-201ENSMUST00000023952 1805 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Ccdc194A0A140LIT1 Gm44957-202ENSMUST00000205137 448 ntTSL 3 BASIC20.7■□□□□ 0.9
Ccdc194A0A140LIT1 Ell3-201ENSMUST00000028679 2115 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Ccdc194A0A140LIT1 Nt5m-201ENSMUST00000102695 1306 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Ccdc194A0A140LIT1 Gm43006-201ENSMUST00000197702 1602 ntBASIC20.7■□□□□ 0.9
Ccdc194A0A140LIT1 Arhgap9-204ENSMUST00000219511 2217 ntAPPRIS ALT2 TSL 1 (best) BASIC20.7■□□□□ 0.9
Ccdc194A0A140LIT1 Ccdc61-201ENSMUST00000098780 2022 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Ccdc194A0A140LIT1 Sox2-201ENSMUST00000099151 2057 ntAPPRIS P1 BASIC20.69■□□□□ 0.9
Ccdc194A0A140LIT1 Cdx1-201ENSMUST00000025521 1750 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Ccdc194A0A140LIT1 Pdss1-207ENSMUST00000152170 1538 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
Ccdc194A0A140LIT1 Psip1-202ENSMUST00000107214 1973 ntTSL 5 BASIC20.69■□□□□ 0.9
Ccdc194A0A140LIT1 Atmin-201ENSMUST00000109099 4877 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Ccdc194A0A140LIT1 AC116713.1-201ENSMUST00000215074 430 ntBASIC20.69■□□□□ 0.9
Ccdc194A0A140LIT1 Homer2-201ENSMUST00000026922 1736 ntAPPRIS ALT2 TSL 1 (best) BASIC20.69■□□□□ 0.9
Ccdc194A0A140LIT1 Setd4-201ENSMUST00000023669 1816 ntAPPRIS P1 TSL 5 BASIC20.69■□□□□ 0.9
Ccdc194A0A140LIT1 H2afj-201ENSMUST00000074556 1831 ntAPPRIS P2 BASIC20.69■□□□□ 0.9
Ccdc194A0A140LIT1 Spata6-213ENSMUST00000153746 1444 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
Ccdc194A0A140LIT1 Puf60-202ENSMUST00000100527 1878 ntAPPRIS P4 TSL 1 (best) BASIC20.69■□□□□ 0.9
Ccdc194A0A140LIT1 Foxe1-201ENSMUST00000095097 2804 ntAPPRIS P1 BASIC20.68■□□□□ 0.9
Ccdc194A0A140LIT1 Vegfb-202ENSMUST00000130048 1158 ntAPPRIS ALT2 TSL 1 (best) BASIC20.68■□□□□ 0.9
Ccdc194A0A140LIT1 Sox12-202ENSMUST00000182625 4453 ntAPPRIS P1 BASIC20.68■□□□□ 0.9
Ccdc194A0A140LIT1 Kansl1-205ENSMUST00000106977 5510 ntAPPRIS P2 TSL 1 (best) BASIC20.67■□□□□ 0.9
Ccdc194A0A140LIT1 Prdm11-205ENSMUST00000178666 1870 ntTSL 5 BASIC20.67■□□□□ 0.9
Ccdc194A0A140LIT1 Sft2d1-210ENSMUST00000154553 1049 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Ccdc194A0A140LIT1 Plk5-201ENSMUST00000039836 2112 ntAPPRIS P3 TSL 2 BASIC20.67■□□□□ 0.9
Ccdc194A0A140LIT1 Plpp1-201ENSMUST00000016144 1598 ntAPPRIS P4 TSL 1 (best) BASIC20.67■□□□□ 0.9
Ccdc194A0A140LIT1 Atp10a-201ENSMUST00000168747 5419 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Ccdc194A0A140LIT1 Atxn7l2-201ENSMUST00000102633 3044 ntAPPRIS P2 TSL 1 (best) BASIC20.67■□□□□ 0.9
Ccdc194A0A140LIT1 Gfi1-202ENSMUST00000065478 2639 ntAPPRIS ALT2 TSL 1 (best) BASIC20.66■□□□□ 0.9
Ccdc194A0A140LIT1 Cox4i1-205ENSMUST00000181586 765 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Ccdc194A0A140LIT1 AC158990.1-201ENSMUST00000221450 2016 ntBASIC20.66■□□□□ 0.9
Ccdc194A0A140LIT1 Kif1bp-202ENSMUST00000159704 2622 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
Ccdc194A0A140LIT1 Ttc14-211ENSMUST00000200271 2724 ntAPPRIS ALT2 TSL 1 (best) BASIC20.66■□□□□ 0.9
Ccdc194A0A140LIT1 Shisa5-201ENSMUST00000026737 1834 ntAPPRIS P3 TSL 1 (best) BASIC20.65■□□□□ 0.9
Ccdc194A0A140LIT1 Gga2-201ENSMUST00000033160 4915 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Ccdc194A0A140LIT1 Tmub1-202ENSMUST00000115033 1598 ntAPPRIS P1 TSL 5 BASIC20.65■□□□□ 0.9
Ccdc194A0A140LIT1 Dleu7-201ENSMUST00000063169 1314 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Ccdc194A0A140LIT1 Gm5067-201ENSMUST00000170449 1009 ntBASIC20.65■□□□□ 0.9
Ccdc194A0A140LIT1 Sds-204ENSMUST00000201684 1288 ntAPPRIS P1 TSL 5 BASIC20.65■□□□□ 0.9
Ccdc194A0A140LIT1 Map4k3-201ENSMUST00000025089 4225 ntAPPRIS P2 TSL 5 BASIC20.65■□□□□ 0.9
Ccdc194A0A140LIT1 Gm5602-201ENSMUST00000146366 1763 ntTSL 1 (best) BASIC20.64■□□□□ 0.9
Ccdc194A0A140LIT1 Lhx2-201ENSMUST00000000253 2840 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
Ccdc194A0A140LIT1 Gm44949-201ENSMUST00000206423 1450 ntBASIC20.64■□□□□ 0.89
Ccdc194A0A140LIT1 Ltbp3-201ENSMUST00000081496 5190 ntAPPRIS P1 TSL 5 BASIC20.64■□□□□ 0.89
Ccdc194A0A140LIT1 Fam92a-208ENSMUST00000177837 1325 ntAPPRIS ALT2 TSL 5 BASIC20.64■□□□□ 0.89
Ccdc194A0A140LIT1 Btf3l4-203ENSMUST00000102741 1033 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Ccdc194A0A140LIT1 Fam168b-204ENSMUST00000170092 941 ntTSL 5 BASIC20.64■□□□□ 0.89
Ccdc194A0A140LIT1 Gm45051-201ENSMUST00000206838 963 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
Ccdc194A0A140LIT1 Pstpip1-201ENSMUST00000059206 1863 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Ccdc194A0A140LIT1 Slc27a3-201ENSMUST00000029541 2259 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Ccdc194A0A140LIT1 Polr2m-201ENSMUST00000034720 2200 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Ccdc194A0A140LIT1 Llph-202ENSMUST00000130198 1463 ntAPPRIS P1 TSL 3 BASIC20.63■□□□□ 0.89
Ccdc194A0A140LIT1 Hsf1-201ENSMUST00000072838 2018 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
Retrieved 100 of 76,532 protein–RNA pairs in 13.9 ms