Protein–RNA interactions for Protein: A0A0G2JFX3

Trav13d-4, T cell receptor alpha variable 13D-4 (Fragment), mousemouse

Predictions only

Length 110 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav13d-4A0A0G2JFX3 4933431K14Rik-201ENSMUST00000195799 1352 ntBASIC14.32□□□□□ -0.12
Trav13d-4A0A0G2JFX3 Tmem70-201ENSMUST00000065373 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
Trav13d-4A0A0G2JFX3 Glrx5-201ENSMUST00000021522 2925 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Trav13d-4A0A0G2JFX3 1700034H15Rik-201ENSMUST00000069573 1461 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Trav13d-4A0A0G2JFX3 Sox17-202ENSMUST00000116652 1512 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Trav13d-4A0A0G2JFX3 Ankrd54-201ENSMUST00000040676 1904 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Trav13d-4A0A0G2JFX3 Abhd13-202ENSMUST00000139793 5191 ntAPPRIS P1 TSL 2 BASIC14.31□□□□□ -0.12
Trav13d-4A0A0G2JFX3 Clpp-201ENSMUST00000002735 1207 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Trav13d-4A0A0G2JFX3 Gadd45a-201ENSMUST00000043098 1223 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Trav13d-4A0A0G2JFX3 Strn3-201ENSMUST00000013130 3046 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Trav13d-4A0A0G2JFX3 Zfp579-201ENSMUST00000108572 2157 ntAPPRIS P1 TSL 2 BASIC14.31□□□□□ -0.12
Trav13d-4A0A0G2JFX3 Slc35f5-201ENSMUST00000027580 2733 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Trav13d-4A0A0G2JFX3 Tysnd1-201ENSMUST00000020284 2286 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Trav13d-4A0A0G2JFX3 Rbfa-201ENSMUST00000025462 1377 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Trav13d-4A0A0G2JFX3 Snapin-203ENSMUST00000149884 1928 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Trav13d-4A0A0G2JFX3 Lmtk3-204ENSMUST00000209617 5051 ntAPPRIS ALT2 TSL 1 (best) BASIC14.31□□□□□ -0.12
Trav13d-4A0A0G2JFX3 Gpr160-204ENSMUST00000108261 2213 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Trav13d-4A0A0G2JFX3 Xylt1-201ENSMUST00000032892 9020 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Trav13d-4A0A0G2JFX3 Spns2-201ENSMUST00000045303 3241 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Trav13d-4A0A0G2JFX3 Nkx2-2-201ENSMUST00000067075 2120 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Trav13d-4A0A0G2JFX3 Ntn5-203ENSMUST00000183120 1491 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Trav13d-4A0A0G2JFX3 Srsf10-203ENSMUST00000102544 2225 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Trav13d-4A0A0G2JFX3 Tusc3-201ENSMUST00000167992 1511 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Trav13d-4A0A0G2JFX3 Akt1s1-201ENSMUST00000054343 1592 ntAPPRIS P3 TSL 1 (best) BASIC14.3□□□□□ -0.12
Trav13d-4A0A0G2JFX3 Dusp26-205ENSMUST00000170204 1627 ntAPPRIS P1 TSL 5 BASIC14.3□□□□□ -0.12
Trav13d-4A0A0G2JFX3 Gm43006-201ENSMUST00000197702 1602 ntBASIC14.3□□□□□ -0.12
Trav13d-4A0A0G2JFX3 Oser1-201ENSMUST00000046908 1620 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Trav13d-4A0A0G2JFX3 Adssl1-201ENSMUST00000021726 1777 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Trav13d-4A0A0G2JFX3 Hsf1-201ENSMUST00000072838 2018 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Trav13d-4A0A0G2JFX3 Ccdc61-201ENSMUST00000098780 2022 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Trav13d-4A0A0G2JFX3 Plk5-201ENSMUST00000039836 2112 ntAPPRIS P3 TSL 2 BASIC14.29□□□□□ -0.12
Trav13d-4A0A0G2JFX3 Zfp69-201ENSMUST00000106280 2362 ntAPPRIS P1 TSL 5 BASIC14.29□□□□□ -0.12
Trav13d-4A0A0G2JFX3 Snx5-201ENSMUST00000028909 2419 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Trav13d-4A0A0G2JFX3 AC151971.4-201ENSMUST00000214717 704 ntBASIC14.29□□□□□ -0.12
Trav13d-4A0A0G2JFX3 Dnajc19-203ENSMUST00000117223 1695 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Trav13d-4A0A0G2JFX3 Rnf166-201ENSMUST00000014614 1783 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Trav13d-4A0A0G2JFX3 Rab3ip-203ENSMUST00000219109 1844 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Trav13d-4A0A0G2JFX3 Pard3-219ENSMUST00000162309 5659 ntAPPRIS P3 TSL 1 (best) BASIC14.28□□□□□ -0.12
Trav13d-4A0A0G2JFX3 Fam241b-203ENSMUST00000124615 1493 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Trav13d-4A0A0G2JFX3 Gm3558-201ENSMUST00000163790 2055 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Trav13d-4A0A0G2JFX3 Cox11-201ENSMUST00000020851 1224 ntAPPRIS P2 TSL 1 (best) BASIC14.28□□□□□ -0.12
Trav13d-4A0A0G2JFX3 Tceal6-201ENSMUST00000033783 1114 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Trav13d-4A0A0G2JFX3 Chadl-201ENSMUST00000072910 2548 ntAPPRIS P1 TSL 5 BASIC14.28□□□□□ -0.12
Trav13d-4A0A0G2JFX3 Hnrnpab-201ENSMUST00000074669 2370 ntAPPRIS P3 TSL 1 (best) BASIC14.28□□□□□ -0.12
Trav13d-4A0A0G2JFX3 Atrn-201ENSMUST00000028781 8745 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Trav13d-4A0A0G2JFX3 Ppp2r5a-201ENSMUST00000067976 3088 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Trav13d-4A0A0G2JFX3 Efcc1-201ENSMUST00000032132 2729 ntAPPRIS ALT2 TSL 5 BASIC14.28□□□□□ -0.12
Trav13d-4A0A0G2JFX3 Homer1-206ENSMUST00000109493 2580 ntTSL 5 BASIC14.28□□□□□ -0.12
Trav13d-4A0A0G2JFX3 Kcnk1-201ENSMUST00000046765 2235 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Trav13d-4A0A0G2JFX3 Hoxd1-201ENSMUST00000047793 1862 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Trav13d-4A0A0G2JFX3 Rell2-201ENSMUST00000070709 1767 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Trav13d-4A0A0G2JFX3 Gabbr1-201ENSMUST00000025338 5248 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Trav13d-4A0A0G2JFX3 Pmpca-202ENSMUST00000114093 1638 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
Trav13d-4A0A0G2JFX3 Asf1a-205ENSMUST00000219282 1150 ntTSL 5 BASIC14.27□□□□□ -0.13
Trav13d-4A0A0G2JFX3 Card19-201ENSMUST00000048946 804 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Trav13d-4A0A0G2JFX3 Ubl3-201ENSMUST00000079324 2537 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Trav13d-4A0A0G2JFX3 Ell3-201ENSMUST00000028679 2115 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Trav13d-4A0A0G2JFX3 Cntfr-203ENSMUST00000102961 1995 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Trav13d-4A0A0G2JFX3 Pdp1-204ENSMUST00000108299 2588 ntAPPRIS ALT2 TSL 2 BASIC14.27□□□□□ -0.13
Trav13d-4A0A0G2JFX3 Rab26-201ENSMUST00000035797 1575 ntAPPRIS P2 TSL 1 (best) BASIC14.26□□□□□ -0.13
Trav13d-4A0A0G2JFX3 Rasgrf2-206ENSMUST00000216219 2115 ntTSL 5 BASIC14.26□□□□□ -0.13
Trav13d-4A0A0G2JFX3 Cers5-201ENSMUST00000023762 2096 ntAPPRIS P2 TSL 1 (best) BASIC14.26□□□□□ -0.13
Trav13d-4A0A0G2JFX3 Notum-203ENSMUST00000106178 2012 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Trav13d-4A0A0G2JFX3 Arpc5l-202ENSMUST00000112862 1339 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Trav13d-4A0A0G2JFX3 Kctd2-202ENSMUST00000106533 2649 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Trav13d-4A0A0G2JFX3 Lsm4-205ENSMUST00000210987 636 ntTSL 5 BASIC14.26□□□□□ -0.13
Trav13d-4A0A0G2JFX3 Dbp-203ENSMUST00000211357 1252 ntTSL 5 BASIC14.26□□□□□ -0.13
Trav13d-4A0A0G2JFX3 Cdx1-201ENSMUST00000025521 1750 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Trav13d-4A0A0G2JFX3 Tnrc18-201ENSMUST00000151477 6487 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Trav13d-4A0A0G2JFX3 Cerk-201ENSMUST00000044332 4518 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Trav13d-4A0A0G2JFX3 Slc9a3r2-201ENSMUST00000002572 2118 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Trav13d-4A0A0G2JFX3 Eml4-203ENSMUST00000112363 5238 ntAPPRIS ALT2 TSL 1 (best) BASIC14.25□□□□□ -0.13
Trav13d-4A0A0G2JFX3 Fastk-201ENSMUST00000030800 1893 ntAPPRIS P2 TSL 1 (best) BASIC14.25□□□□□ -0.13
Trav13d-4A0A0G2JFX3 Fam118b-201ENSMUST00000059057 1860 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Trav13d-4A0A0G2JFX3 Zcchc24-201ENSMUST00000069180 4556 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Trav13d-4A0A0G2JFX3 Prdm13-202ENSMUST00000095141 3173 ntAPPRIS P2 TSL 2 BASIC14.25□□□□□ -0.13
Trav13d-4A0A0G2JFX3 Gorasp2-201ENSMUST00000028509 2238 ntAPPRIS P2 TSL 1 (best) BASIC14.25□□□□□ -0.13
Trav13d-4A0A0G2JFX3 Ankrd13c-202ENSMUST00000164582 1735 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Trav13d-4A0A0G2JFX3 Mecp2-201ENSMUST00000033770 1739 ntAPPRIS P4 TSL 1 (best) BASIC14.25□□□□□ -0.13
Trav13d-4A0A0G2JFX3 Dnajc19-202ENSMUST00000108195 659 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Trav13d-4A0A0G2JFX3 Sike1-202ENSMUST00000119450 774 ntTSL 3 BASIC14.25□□□□□ -0.13
Trav13d-4A0A0G2JFX3 Larp1-201ENSMUST00000071487 6614 ntAPPRIS ALT2 TSL 5 BASIC14.25□□□□□ -0.13
Trav13d-4A0A0G2JFX3 Ugp2-201ENSMUST00000060895 2044 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Trav13d-4A0A0G2JFX3 Gm15893-201ENSMUST00000143208 1559 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Trav13d-4A0A0G2JFX3 4930500M09Rik-202ENSMUST00000194988 1563 ntBASIC14.25□□□□□ -0.13
Trav13d-4A0A0G2JFX3 Bbc3-201ENSMUST00000002152 1814 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Trav13d-4A0A0G2JFX3 Lsr-203ENSMUST00000108116 2071 ntAPPRIS ALT2 TSL 1 (best) BASIC14.24□□□□□ -0.13
Trav13d-4A0A0G2JFX3 Abhd12-201ENSMUST00000056149 1999 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Trav13d-4A0A0G2JFX3 Smagp-202ENSMUST00000172334 952 ntAPPRIS P1 TSL 2 BASIC14.24□□□□□ -0.13
Trav13d-4A0A0G2JFX3 Hsf1-207ENSMUST00000228371 2102 ntBASIC14.24□□□□□ -0.13
Trav13d-4A0A0G2JFX3 Dip2c-203ENSMUST00000174552 8023 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Trav13d-4A0A0G2JFX3 Gm43403-201ENSMUST00000198011 1786 ntBASIC14.24□□□□□ -0.13
Trav13d-4A0A0G2JFX3 Gm5475-201ENSMUST00000132119 2608 ntAPPRIS P5 TSL 1 (best) BASIC14.24□□□□□ -0.13
Trav13d-4A0A0G2JFX3 Eva1b-203ENSMUST00000106152 1364 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Trav13d-4A0A0G2JFX3 Fmnl2-201ENSMUST00000049483 5461 ntTSL 5 BASIC14.23□□□□□ -0.13
Trav13d-4A0A0G2JFX3 B430319F04Rik-201ENSMUST00000209731 2669 ntBASIC14.23□□□□□ -0.13
Trav13d-4A0A0G2JFX3 Pank2-204ENSMUST00000150843 4266 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Trav13d-4A0A0G2JFX3 Tada2b-202ENSMUST00000119916 1321 ntTSL 5 BASIC14.23□□□□□ -0.13
Trav13d-4A0A0G2JFX3 Krt8-201ENSMUST00000023952 1805 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Trav13d-4A0A0G2JFX3 Pigv-202ENSMUST00000067902 990 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Retrieved 100 of 76,532 protein–RNA pairs in 11.9 ms