Protein–RNA interactions for Protein: A0A0B4J1I1

Igkv16-104, Immunoglobulin kappa variable 16-104 (Fragment), mousemouse

Predictions only

Length 116 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Igkv16-104A0A0B4J1I1 Serbp1-212ENSMUST00000204294 717 ntTSL 5 BASIC21.49■■□□□ 1.03
Igkv16-104A0A0B4J1I1 Krtap5-5-201ENSMUST00000097942 1177 ntAPPRIS P1 BASIC21.49■■□□□ 1.03
Igkv16-104A0A0B4J1I1 Sdccag3-203ENSMUST00000114100 2099 ntAPPRIS ALT2 TSL 5 BASIC21.49■■□□□ 1.03
Igkv16-104A0A0B4J1I1 Arpc2-202ENSMUST00000113819 1313 ntTSL 5 BASIC21.49■■□□□ 1.03
Igkv16-104A0A0B4J1I1 Uap1-203ENSMUST00000111351 2287 ntAPPRIS ALT2 TSL 1 (best) BASIC21.49■■□□□ 1.03
Igkv16-104A0A0B4J1I1 Kansl1l-202ENSMUST00000113987 2342 ntTSL 1 (best) BASIC21.48■■□□□ 1.03
Igkv16-104A0A0B4J1I1 1810022K09Rik-201ENSMUST00000108365 559 ntAPPRIS ALT2 TSL 1 (best) BASIC21.48■■□□□ 1.03
Igkv16-104A0A0B4J1I1 Stmn4-202ENSMUST00000118426 1281 ntTSL 1 (best) BASIC21.48■■□□□ 1.03
Igkv16-104A0A0B4J1I1 Get4-201ENSMUST00000026976 2107 ntAPPRIS P3 TSL 1 (best) BASIC21.48■■□□□ 1.03
Igkv16-104A0A0B4J1I1 Cox6a1-201ENSMUST00000040154 571 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
Igkv16-104A0A0B4J1I1 Hoxb9-201ENSMUST00000000010 2574 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
Igkv16-104A0A0B4J1I1 AC115037.1-201ENSMUST00000223391 2173 ntBASIC21.48■■□□□ 1.03
Igkv16-104A0A0B4J1I1 Tirap-207ENSMUST00000177129 2366 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
Igkv16-104A0A0B4J1I1 Kcnip1-203ENSMUST00000109340 1840 ntTSL 1 (best) BASIC21.47■■□□□ 1.03
Igkv16-104A0A0B4J1I1 2310015A10Rik-201ENSMUST00000180643 1399 ntTSL 1 (best) BASIC21.47■■□□□ 1.03
Igkv16-104A0A0B4J1I1 Cnot6-201ENSMUST00000020624 2498 ntTSL 1 (best) BASIC21.47■■□□□ 1.03
Igkv16-104A0A0B4J1I1 Sdccag3-201ENSMUST00000028293 2031 ntAPPRIS ALT2 TSL 1 (best) BASIC21.46■■□□□ 1.03
Igkv16-104A0A0B4J1I1 Kcnc3-203ENSMUST00000207493 2731 ntAPPRIS ALT2 TSL 5 BASIC21.46■■□□□ 1.03
Igkv16-104A0A0B4J1I1 Kcnc3-206ENSMUST00000208651 2728 ntAPPRIS ALT2 TSL 5 BASIC21.46■■□□□ 1.03
Igkv16-104A0A0B4J1I1 4930535I16Rik-201ENSMUST00000181410 519 ntAPPRIS P1 BASIC21.46■■□□□ 1.03
Igkv16-104A0A0B4J1I1 Arl6ip4-201ENSMUST00000031351 1192 ntAPPRIS P2 TSL 1 (best) BASIC21.46■■□□□ 1.03
Igkv16-104A0A0B4J1I1 Lypla2-201ENSMUST00000067567 1626 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
Igkv16-104A0A0B4J1I1 Btbd17-201ENSMUST00000000206 1717 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
Igkv16-104A0A0B4J1I1 Aurkb-202ENSMUST00000108666 1831 ntAPPRIS P1 TSL 5 BASIC21.45■■□□□ 1.03
Igkv16-104A0A0B4J1I1 H1f0-201ENSMUST00000180086 2287 ntAPPRIS P1 BASIC21.45■■□□□ 1.02
Igkv16-104A0A0B4J1I1 A030001D20Rik-201ENSMUST00000211533 1542 ntTSL 1 (best) BASIC21.45■■□□□ 1.02
Igkv16-104A0A0B4J1I1 Gng5-203ENSMUST00000119130 593 ntTSL 2 BASIC21.45■■□□□ 1.02
Igkv16-104A0A0B4J1I1 Gm7143-201ENSMUST00000222811 859 ntBASIC21.45■■□□□ 1.02
Igkv16-104A0A0B4J1I1 Gm3448-202ENSMUST00000097400 747 ntAPPRIS ALT2 TSL 5 BASIC21.45■■□□□ 1.02
Igkv16-104A0A0B4J1I1 Txnrd2-212ENSMUST00000177856 1878 ntAPPRIS ALT2 TSL 5 BASIC21.45■■□□□ 1.02
Igkv16-104A0A0B4J1I1 Homer3-203ENSMUST00000110124 2445 ntAPPRIS ALT1 TSL 5 BASIC21.45■■□□□ 1.02
Igkv16-104A0A0B4J1I1 Grasp-201ENSMUST00000000543 2013 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
Igkv16-104A0A0B4J1I1 Hes7-201ENSMUST00000024543 1809 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
Igkv16-104A0A0B4J1I1 Akt1s1-203ENSMUST00000107882 1160 ntAPPRIS ALT2 TSL 3 BASIC21.44■■□□□ 1.02
Igkv16-104A0A0B4J1I1 Pigp-204ENSMUST00000113914 912 ntTSL 1 (best) BASIC21.44■■□□□ 1.02
Igkv16-104A0A0B4J1I1 Tmem9-202ENSMUST00000117950 847 ntAPPRIS P1 TSL 2 BASIC21.44■■□□□ 1.02
Igkv16-104A0A0B4J1I1 Gm11586-201ENSMUST00000123060 566 ntTSL 2 BASIC21.44■■□□□ 1.02
Igkv16-104A0A0B4J1I1 Gm4285-201ENSMUST00000131222 902 ntTSL 2 BASIC21.44■■□□□ 1.02
Igkv16-104A0A0B4J1I1 Gm6569-201ENSMUST00000154520 811 ntAPPRIS P1 TSL 3 BASIC21.44■■□□□ 1.02
Igkv16-104A0A0B4J1I1 Mir7075-201ENSMUST00000184187 82 ntBASIC21.44■■□□□ 1.02
Igkv16-104A0A0B4J1I1 Gm8495-201ENSMUST00000188740 694 ntBASIC21.44■■□□□ 1.02
Igkv16-104A0A0B4J1I1 Foxo3-202ENSMUST00000105501 1316 ntTSL 1 (best) BASIC21.44■■□□□ 1.02
Igkv16-104A0A0B4J1I1 Phax-202ENSMUST00000130163 1386 ntAPPRIS ALT2 TSL 1 (best) BASIC21.44■■□□□ 1.02
Igkv16-104A0A0B4J1I1 Wtap-203ENSMUST00000159551 2060 ntAPPRIS P1 TSL 5 BASIC21.44■■□□□ 1.02
Igkv16-104A0A0B4J1I1 Smurf1-201ENSMUST00000085684 5343 ntAPPRIS P4 TSL 1 (best) BASIC21.43■■□□□ 1.02
Igkv16-104A0A0B4J1I1 Gm28050-202ENSMUST00000131029 663 ntTSL 1 (best) BASIC21.43■■□□□ 1.02
Igkv16-104A0A0B4J1I1 Gm18284-201ENSMUST00000172604 624 ntBASIC21.43■■□□□ 1.02
Igkv16-104A0A0B4J1I1 Apoe-205ENSMUST00000173739 1221 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
Igkv16-104A0A0B4J1I1 Apoe-209ENSMUST00000174355 1104 ntAPPRIS P1 TSL 5 BASIC21.43■■□□□ 1.02
Igkv16-104A0A0B4J1I1 Kiss1-204ENSMUST00000194044 583 ntAPPRIS P1 TSL 2 BASIC21.43■■□□□ 1.02
Igkv16-104A0A0B4J1I1 Kiss1-205ENSMUST00000195286 656 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
Igkv16-104A0A0B4J1I1 Apoe-201ENSMUST00000003066 1128 ntAPPRIS P1 TSL 5 BASIC21.43■■□□□ 1.02
Igkv16-104A0A0B4J1I1 Arhgap27os2-201ENSMUST00000123812 1390 ntTSL 1 (best) BASIC21.43■■□□□ 1.02
Igkv16-104A0A0B4J1I1 Slc35a2-209ENSMUST00000208397 1374 ntAPPRIS ALT2 TSL 5 BASIC21.43■■□□□ 1.02
Igkv16-104A0A0B4J1I1 Snrpa-201ENSMUST00000080356 1365 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
Igkv16-104A0A0B4J1I1 St3gal2-202ENSMUST00000117534 2177 ntTSL 1 (best) BASIC21.43■■□□□ 1.02
Igkv16-104A0A0B4J1I1 March2-210ENSMUST00000186022 2470 ntTSL 1 (best) BASIC21.43■■□□□ 1.02
Igkv16-104A0A0B4J1I1 Fam120a-201ENSMUST00000060805 5105 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
Igkv16-104A0A0B4J1I1 Cdkn2a-202ENSMUST00000107131 895 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
Igkv16-104A0A0B4J1I1 Nfu1-202ENSMUST00000117583 950 ntAPPRIS ALT2 TSL 1 (best) BASIC21.42■■□□□ 1.02
Igkv16-104A0A0B4J1I1 Usf2-211ENSMUST00000172417 648 ntTSL 5 BASIC21.42■■□□□ 1.02
Igkv16-104A0A0B4J1I1 Flvcr1-202ENSMUST00000191946 1216 ntBASIC21.42■■□□□ 1.02
Igkv16-104A0A0B4J1I1 Rasl10b-201ENSMUST00000021022 996 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
Igkv16-104A0A0B4J1I1 Mnx1-202ENSMUST00000165512 2245 ntAPPRIS P2 TSL 1 (best) BASIC21.41■■□□□ 1.02
Igkv16-104A0A0B4J1I1 Gnaq-201ENSMUST00000025541 5644 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
Igkv16-104A0A0B4J1I1 Art1-201ENSMUST00000033300 1425 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
Igkv16-104A0A0B4J1I1 Bola1-202ENSMUST00000107099 995 ntAPPRIS P1 TSL 2 BASIC21.41■■□□□ 1.02
Igkv16-104A0A0B4J1I1 Gm8770-201ENSMUST00000121113 1109 ntBASIC21.41■■□□□ 1.02
Igkv16-104A0A0B4J1I1 Thap8-201ENSMUST00000014072 1182 ntAPPRIS ALT2 TSL 5 BASIC21.41■■□□□ 1.02
Igkv16-104A0A0B4J1I1 Bola1-201ENSMUST00000016087 729 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
Igkv16-104A0A0B4J1I1 Ubxn1-202ENSMUST00000166407 1032 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
Igkv16-104A0A0B4J1I1 Ypel3-210ENSMUST00000170882 1050 ntAPPRIS P1 TSL 3 BASIC21.41■■□□□ 1.02
Igkv16-104A0A0B4J1I1 Bola1-203ENSMUST00000177442 692 ntAPPRIS P1 TSL 3 BASIC21.41■■□□□ 1.02
Igkv16-104A0A0B4J1I1 Vps37b-201ENSMUST00000040967 2522 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
Igkv16-104A0A0B4J1I1 Sh3rf3-202ENSMUST00000135526 1940 ntTSL 1 (best) BASIC21.41■■□□□ 1.02
Igkv16-104A0A0B4J1I1 Msl2-202ENSMUST00000189616 2612 ntTSL 5 BASIC21.41■■□□□ 1.02
Igkv16-104A0A0B4J1I1 Ubp1-204ENSMUST00000214095 2320 ntAPPRIS ALT1 TSL 1 (best) BASIC21.4■■□□□ 1.02
Igkv16-104A0A0B4J1I1 Slc25a3-203ENSMUST00000164505 1483 ntAPPRIS P2 TSL 5 BASIC21.4■■□□□ 1.02
Igkv16-104A0A0B4J1I1 Ankra2-202ENSMUST00000091356 1949 ntTSL 1 (best) BASIC21.4■■□□□ 1.02
Igkv16-104A0A0B4J1I1 Sumo2-205ENSMUST00000121185 911 ntTSL 3 BASIC21.4■■□□□ 1.02
Igkv16-104A0A0B4J1I1 Snx16-203ENSMUST00000195822 1084 ntTSL 1 (best) BASIC21.4■■□□□ 1.02
Igkv16-104A0A0B4J1I1 Gm21168-201ENSMUST00000199646 1096 ntBASIC21.4■■□□□ 1.02
Igkv16-104A0A0B4J1I1 Kcna3-201ENSMUST00000052718 1902 ntAPPRIS P1 BASIC21.39■■□□□ 1.02
Igkv16-104A0A0B4J1I1 Tmem114-201ENSMUST00000023400 1406 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.02
Igkv16-104A0A0B4J1I1 Ppp4r1l-ps-204ENSMUST00000140992 367 ntTSL 3 BASIC21.39■■□□□ 1.01
Igkv16-104A0A0B4J1I1 Slc35b2-207ENSMUST00000226086 850 ntBASIC21.39■■□□□ 1.01
Igkv16-104A0A0B4J1I1 Pop7-201ENSMUST00000031728 881 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
Igkv16-104A0A0B4J1I1 Irx1-201ENSMUST00000077337 2373 ntAPPRIS P2 TSL 1 (best) BASIC21.39■■□□□ 1.01
Igkv16-104A0A0B4J1I1 Tinagl1-203ENSMUST00000105999 1952 ntAPPRIS P2 TSL 1 (best) BASIC21.39■■□□□ 1.01
Igkv16-104A0A0B4J1I1 P4htm-201ENSMUST00000006853 1841 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
Igkv16-104A0A0B4J1I1 Smurf1-202ENSMUST00000100461 2725 ntAPPRIS ALT1 TSL 1 (best) BASIC21.38■■□□□ 1.01
Igkv16-104A0A0B4J1I1 Hccs-201ENSMUST00000033717 2320 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
Igkv16-104A0A0B4J1I1 Dusp1-201ENSMUST00000025025 1990 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
Igkv16-104A0A0B4J1I1 Plvap-201ENSMUST00000048452 1987 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
Igkv16-104A0A0B4J1I1 Rcor3-206ENSMUST00000192491 1623 ntTSL 1 (best) BASIC21.38■■□□□ 1.01
Igkv16-104A0A0B4J1I1 Oser1-201ENSMUST00000046908 1620 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
Igkv16-104A0A0B4J1I1 Paip2-204ENSMUST00000115736 857 ntAPPRIS P1 TSL 3 BASIC21.38■■□□□ 1.01
Igkv16-104A0A0B4J1I1 Pole4-204ENSMUST00000160281 648 ntAPPRIS ALT1 TSL 1 (best) BASIC21.38■■□□□ 1.01
Igkv16-104A0A0B4J1I1 Rtn4-210ENSMUST00000170731 1272 ntTSL 1 (best) BASIC21.38■■□□□ 1.01
Igkv16-104A0A0B4J1I1 Prr3-204ENSMUST00000172900 439 ntTSL 2 BASIC21.38■■□□□ 1.01
Retrieved 100 of 76,532 protein–RNA pairs in 18.1 ms