Protein–RNA interactions for Protein: A0A0B4J1H2

Trbv13-3, T cell receptor beta, variable 13-3 (Fragment), mousemouse

Predictions only

Length 113 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trbv13-3A0A0B4J1H2 Mlf2-202ENSMUST00000180095 1475 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Trbv13-3A0A0B4J1H2 Ube2j2-205ENSMUST00000105583 1434 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
Trbv13-3A0A0B4J1H2 Snap91-203ENSMUST00000074501 2577 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
Trbv13-3A0A0B4J1H2 Terc-201ENSMUST00000082862 423 ntBASIC16.31■□□□□ 0.2
Trbv13-3A0A0B4J1H2 Bfsp1-201ENSMUST00000028907 2372 ntAPPRIS P3 TSL 1 (best) BASIC16.31■□□□□ 0.2
Trbv13-3A0A0B4J1H2 Cacna2d2-201ENSMUST00000010210 5783 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
Trbv13-3A0A0B4J1H2 Paip1-201ENSMUST00000026520 2551 ntAPPRIS P3 TSL 1 (best) BASIC16.31■□□□□ 0.2
Trbv13-3A0A0B4J1H2 Mylip-201ENSMUST00000038275 3065 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Trbv13-3A0A0B4J1H2 Ncoa5-202ENSMUST00000121377 2930 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
Trbv13-3A0A0B4J1H2 Ubxn2a-203ENSMUST00000142867 2146 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Trbv13-3A0A0B4J1H2 Ubl3-202ENSMUST00000164904 2001 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Trbv13-3A0A0B4J1H2 Cdkl3-202ENSMUST00000063321 2008 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
Trbv13-3A0A0B4J1H2 Man2c1os-201ENSMUST00000125333 1910 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
Trbv13-3A0A0B4J1H2 Slc35b2-205ENSMUST00000224905 1906 ntAPPRIS P1 BASIC16.3■□□□□ 0.2
Trbv13-3A0A0B4J1H2 Gm20402-201ENSMUST00000174738 687 ntTSL 3 BASIC16.3■□□□□ 0.2
Trbv13-3A0A0B4J1H2 Col23a1-201ENSMUST00000102765 5658 ntAPPRIS P1 TSL 5 BASIC16.3■□□□□ 0.2
Trbv13-3A0A0B4J1H2 N4bp1-201ENSMUST00000034074 6469 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Trbv13-3A0A0B4J1H2 Kmt2b-202ENSMUST00000108154 8454 ntAPPRIS P2 TSL 1 (best) BASIC16.3■□□□□ 0.2
Trbv13-3A0A0B4J1H2 Tmem164-205ENSMUST00000112891 1654 ntTSL 5 BASIC16.3■□□□□ 0.2
Trbv13-3A0A0B4J1H2 Htra2-203ENSMUST00000113963 1629 ntTSL 5 BASIC16.3■□□□□ 0.2
Trbv13-3A0A0B4J1H2 Cpne2-202ENSMUST00000109537 2121 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
Trbv13-3A0A0B4J1H2 B3galnt1-201ENSMUST00000061826 2028 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Trbv13-3A0A0B4J1H2 Cobll1-204ENSMUST00000112430 4917 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
Trbv13-3A0A0B4J1H2 Gm28052-201ENSMUST00000150388 380 ntTSL 3 BASIC16.29■□□□□ 0.2
Trbv13-3A0A0B4J1H2 Aspscr1-203ENSMUST00000106158 1690 ntTSL 5 BASIC16.29■□□□□ 0.2
Trbv13-3A0A0B4J1H2 Adrb1-201ENSMUST00000038949 2491 ntAPPRIS P1 BASIC16.29■□□□□ 0.2
Trbv13-3A0A0B4J1H2 Ndufs2-201ENSMUST00000013737 1623 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Trbv13-3A0A0B4J1H2 Xkr6-201ENSMUST00000119973 2963 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Trbv13-3A0A0B4J1H2 Donson-203ENSMUST00000117159 2215 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
Trbv13-3A0A0B4J1H2 Klc3-204ENSMUST00000108459 1849 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
Trbv13-3A0A0B4J1H2 Il17re-205ENSMUST00000203661 2118 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
Trbv13-3A0A0B4J1H2 Gm20503-201ENSMUST00000174664 1294 ntAPPRIS P1 TSL 5 BASIC16.28■□□□□ 0.2
Trbv13-3A0A0B4J1H2 Gm31266-201ENSMUST00000192060 656 ntTSL 5 BASIC16.28■□□□□ 0.2
Trbv13-3A0A0B4J1H2 Gm42809-201ENSMUST00000198429 1138 ntBASIC16.28■□□□□ 0.2
Trbv13-3A0A0B4J1H2 Rpf2-201ENSMUST00000045114 1853 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
Trbv13-3A0A0B4J1H2 Gm10837-201ENSMUST00000100294 1536 ntAPPRIS P1 BASIC16.28■□□□□ 0.2
Trbv13-3A0A0B4J1H2 Cers1-203ENSMUST00000165819 2728 ntAPPRIS P4 TSL 1 (best) BASIC16.28■□□□□ 0.2
Trbv13-3A0A0B4J1H2 Otulin-201ENSMUST00000059662 1491 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Trbv13-3A0A0B4J1H2 Pkd2-201ENSMUST00000086831 5219 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Trbv13-3A0A0B4J1H2 Psip1-202ENSMUST00000107214 1973 ntTSL 5 BASIC16.27■□□□□ 0.2
Trbv13-3A0A0B4J1H2 Kndc1-202ENSMUST00000121839 2210 ntTSL 2 BASIC16.27■□□□□ 0.2
Trbv13-3A0A0B4J1H2 Rfk-201ENSMUST00000025617 2482 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Trbv13-3A0A0B4J1H2 Dusp22-203ENSMUST00000110310 2319 ntTSL 2 BASIC16.27■□□□□ 0.2
Trbv13-3A0A0B4J1H2 Bspry-201ENSMUST00000030088 1757 ntAPPRIS P2 TSL 1 (best) BASIC16.27■□□□□ 0.2
Trbv13-3A0A0B4J1H2 Gabra5-201ENSMUST00000068456 2671 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
Trbv13-3A0A0B4J1H2 D030056L22Rik-202ENSMUST00000062753 1677 ntAPPRIS ALT2 TSL 1 (best) BASIC16.27■□□□□ 0.19
Trbv13-3A0A0B4J1H2 Ddost-201ENSMUST00000030538 2120 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
Trbv13-3A0A0B4J1H2 Pick1-204ENSMUST00000163571 2054 ntAPPRIS P1 TSL 5 BASIC16.26■□□□□ 0.19
Trbv13-3A0A0B4J1H2 Klrg2-201ENSMUST00000096030 2276 ntAPPRIS P2 TSL 1 (best) BASIC16.26■□□□□ 0.19
Trbv13-3A0A0B4J1H2 Mvb12b-201ENSMUST00000041555 4998 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Trbv13-3A0A0B4J1H2 Mtfr1l-201ENSMUST00000102550 2025 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Trbv13-3A0A0B4J1H2 Snrnp40-201ENSMUST00000105994 1584 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Trbv13-3A0A0B4J1H2 Sys1-202ENSMUST00000109352 2001 ntAPPRIS P1 TSL 5 BASIC16.26■□□□□ 0.19
Trbv13-3A0A0B4J1H2 Gng13-201ENSMUST00000115108 347 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Trbv13-3A0A0B4J1H2 Trim33-202ENSMUST00000106860 5025 ntAPPRIS ALT2 TSL 1 (best) BASIC16.26■□□□□ 0.19
Trbv13-3A0A0B4J1H2 Jkamp-202ENSMUST00000117449 1874 ntAPPRIS ALT2 TSL 1 (best) BASIC16.26■□□□□ 0.19
Trbv13-3A0A0B4J1H2 Pds5a-209ENSMUST00000201948 8934 ntAPPRIS P1 TSL 5 BASIC16.25■□□□□ 0.19
Trbv13-3A0A0B4J1H2 Thoc6-201ENSMUST00000047436 1504 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Trbv13-3A0A0B4J1H2 Vgf-202ENSMUST00000186451 2277 ntAPPRIS P1 TSL 5 BASIC16.25■□□□□ 0.19
Trbv13-3A0A0B4J1H2 Mgat1-213ENSMUST00000167400 3151 ntAPPRIS P1 TSL 5 BASIC16.25■□□□□ 0.19
Trbv13-3A0A0B4J1H2 Mark2-207ENSMUST00000165286 2975 ntAPPRIS ALT2 TSL 5 BASIC16.25■□□□□ 0.19
Trbv13-3A0A0B4J1H2 Tada1-201ENSMUST00000027846 2215 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Trbv13-3A0A0B4J1H2 Rfx8-202ENSMUST00000151913 2008 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Trbv13-3A0A0B4J1H2 Nrtn-201ENSMUST00000044752 1023 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Trbv13-3A0A0B4J1H2 Gm4799-201ENSMUST00000095396 657 ntBASIC16.25■□□□□ 0.19
Trbv13-3A0A0B4J1H2 Krt5-201ENSMUST00000023709 2190 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Trbv13-3A0A0B4J1H2 Smad2-205ENSMUST00000168423 2857 ntAPPRIS P3 TSL 1 (best) BASIC16.25■□□□□ 0.19
Trbv13-3A0A0B4J1H2 Eif5a-201ENSMUST00000043419 1437 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Trbv13-3A0A0B4J1H2 Hipk1-201ENSMUST00000029438 4185 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Trbv13-3A0A0B4J1H2 Gm12818-201ENSMUST00000117562 1349 ntBASIC16.24■□□□□ 0.19
Trbv13-3A0A0B4J1H2 Kif27-203ENSMUST00000225388 5121 ntAPPRIS P1 BASIC16.24■□□□□ 0.19
Trbv13-3A0A0B4J1H2 Gm26837-201ENSMUST00000180821 2110 ntTSL 5 BASIC16.24■□□□□ 0.19
Trbv13-3A0A0B4J1H2 Lzts2-202ENSMUST00000178087 2773 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Trbv13-3A0A0B4J1H2 Zbtb4-203ENSMUST00000108640 4067 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Trbv13-3A0A0B4J1H2 Gm527-203ENSMUST00000220993 1090 ntTSL 5 BASIC16.24■□□□□ 0.19
Trbv13-3A0A0B4J1H2 Fam207a-201ENSMUST00000045454 2394 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Trbv13-3A0A0B4J1H2 Rbfox3-204ENSMUST00000106278 1542 ntAPPRIS ALT2 TSL 1 (best) BASIC16.24■□□□□ 0.19
Trbv13-3A0A0B4J1H2 Fbxw2-202ENSMUST00000091020 1838 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
Trbv13-3A0A0B4J1H2 Slc12a2-201ENSMUST00000115366 6520 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Trbv13-3A0A0B4J1H2 D11Wsu47e-201ENSMUST00000042227 2196 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Trbv13-3A0A0B4J1H2 3830408C21Rik-205ENSMUST00000225426 1898 ntBASIC16.23■□□□□ 0.19
Trbv13-3A0A0B4J1H2 Ankrd13c-202ENSMUST00000164582 1735 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Trbv13-3A0A0B4J1H2 Smarcad1-211ENSMUST00000204696 734 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
Trbv13-3A0A0B4J1H2 A930035D04Rik-201ENSMUST00000064013 543 ntBASIC16.23■□□□□ 0.19
Trbv13-3A0A0B4J1H2 Kcnip1-203ENSMUST00000109340 1840 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
Trbv13-3A0A0B4J1H2 Usf1-210ENSMUST00000167546 1822 ntAPPRIS P1 TSL 5 BASIC16.23■□□□□ 0.19
Trbv13-3A0A0B4J1H2 Fgfbp3-201ENSMUST00000057337 1772 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Trbv13-3A0A0B4J1H2 Hira-201ENSMUST00000004222 4218 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Trbv13-3A0A0B4J1H2 Fam83d-201ENSMUST00000029183 2266 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Trbv13-3A0A0B4J1H2 Arhgap23-202ENSMUST00000107601 5450 ntTSL 5 BASIC16.22■□□□□ 0.19
Trbv13-3A0A0B4J1H2 Hoxb6-202ENSMUST00000173432 1964 ntAPPRIS P1 TSL 5 BASIC16.22■□□□□ 0.19
Trbv13-3A0A0B4J1H2 Tead1-204ENSMUST00000106638 3047 ntAPPRIS ALT1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Trbv13-3A0A0B4J1H2 Ptpn18-201ENSMUST00000027302 1559 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Trbv13-3A0A0B4J1H2 Aurkb-202ENSMUST00000108666 1831 ntAPPRIS P1 TSL 5 BASIC16.22■□□□□ 0.19
Trbv13-3A0A0B4J1H2 Cops7a-201ENSMUST00000032220 1817 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Trbv13-3A0A0B4J1H2 Nrl-203ENSMUST00000178694 1928 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Trbv13-3A0A0B4J1H2 Trp73os-201ENSMUST00000143429 2192 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
Trbv13-3A0A0B4J1H2 Ppp1r14a-202ENSMUST00000207714 755 ntTSL 3 BASIC16.22■□□□□ 0.19
Trbv13-3A0A0B4J1H2 Scx-201ENSMUST00000043089 1136 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Trbv13-3A0A0B4J1H2 Ubxn2a-201ENSMUST00000020962 2696 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Retrieved 100 of 76,532 protein–RNA pairs in 17.2 ms