Protein–RNA interactions for Protein: A0A0B4J1G8

Trbv2, T cell receptor beta, variable 2 (Fragment), mousemouse

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trbv2A0A0B4J1G8 Rpf2-201ENSMUST00000045114 1853 ntTSL 1 (best) BASIC18.58■□□□□ 0.57
Trbv2A0A0B4J1G8 Ezh2-203ENSMUST00000114616 2670 ntAPPRIS ALT1 TSL 5 BASIC18.58■□□□□ 0.57
Trbv2A0A0B4J1G8 Lgals3-201ENSMUST00000142734 1419 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
Trbv2A0A0B4J1G8 Thap11-201ENSMUST00000040445 1819 ntAPPRIS P1 BASIC18.58■□□□□ 0.57
Trbv2A0A0B4J1G8 Smad6-201ENSMUST00000041029 2971 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
Trbv2A0A0B4J1G8 Ube2d2a-202ENSMUST00000170693 2483 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
Trbv2A0A0B4J1G8 Selenoo-201ENSMUST00000082439 2383 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
Trbv2A0A0B4J1G8 Pradc1-201ENSMUST00000032080 1038 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
Trbv2A0A0B4J1G8 Psip1-202ENSMUST00000107214 1973 ntTSL 5 BASIC18.58■□□□□ 0.56
Trbv2A0A0B4J1G8 Fah-201ENSMUST00000032865 1585 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
Trbv2A0A0B4J1G8 Oaf-201ENSMUST00000034512 2526 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
Trbv2A0A0B4J1G8 Zfp821-201ENSMUST00000034163 2127 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
Trbv2A0A0B4J1G8 Calml3-201ENSMUST00000077698 1421 ntAPPRIS P1 BASIC18.57■□□□□ 0.56
Trbv2A0A0B4J1G8 Cadps-202ENSMUST00000112657 5455 ntAPPRIS ALT2 TSL 5 BASIC18.57■□□□□ 0.56
Trbv2A0A0B4J1G8 Nkpd1-203ENSMUST00000214205 2309 ntAPPRIS ALT2 TSL 5 BASIC18.57■□□□□ 0.56
Trbv2A0A0B4J1G8 Ldb1-202ENSMUST00000056931 2295 ntAPPRIS P2 TSL 1 (best) BASIC18.57■□□□□ 0.56
Trbv2A0A0B4J1G8 Kazald1-202ENSMUST00000111948 1625 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Trbv2A0A0B4J1G8 Cav2-201ENSMUST00000000058 2733 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Trbv2A0A0B4J1G8 Stbd1-202ENSMUST00000200941 523 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
Trbv2A0A0B4J1G8 Cox11-201ENSMUST00000020851 1224 ntAPPRIS P2 TSL 1 (best) BASIC18.57■□□□□ 0.56
Trbv2A0A0B4J1G8 AC151971.4-201ENSMUST00000214717 704 ntBASIC18.57■□□□□ 0.56
Trbv2A0A0B4J1G8 Rspo1-201ENSMUST00000030687 1834 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Trbv2A0A0B4J1G8 Rbfox3-204ENSMUST00000106278 1542 ntAPPRIS ALT2 TSL 1 (best) BASIC18.57■□□□□ 0.56
Trbv2A0A0B4J1G8 Tinagl1-202ENSMUST00000105998 1976 ntAPPRIS P2 TSL 1 (best) BASIC18.57■□□□□ 0.56
Trbv2A0A0B4J1G8 Tada1-201ENSMUST00000027846 2215 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Trbv2A0A0B4J1G8 Btg3-201ENSMUST00000023570 1414 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Trbv2A0A0B4J1G8 Macrod2-207ENSMUST00000110067 4730 ntAPPRIS ALT2 TSL 5 BASIC18.57■□□□□ 0.56
Trbv2A0A0B4J1G8 Cobll1-204ENSMUST00000112430 4917 ntAPPRIS ALT2 TSL 1 (best) BASIC18.56■□□□□ 0.56
Trbv2A0A0B4J1G8 Uap1-201ENSMUST00000027981 2283 ntAPPRIS P3 TSL 1 (best) BASIC18.56■□□□□ 0.56
Trbv2A0A0B4J1G8 Vegfa-212ENSMUST00000214739 1107 ntAPPRIS ALT2 TSL 1 (best) BASIC18.56■□□□□ 0.56
Trbv2A0A0B4J1G8 Gm9806-201ENSMUST00000051080 552 ntBASIC18.56■□□□□ 0.56
Trbv2A0A0B4J1G8 Pmpca-202ENSMUST00000114093 1638 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
Trbv2A0A0B4J1G8 Tmem164-206ENSMUST00000112896 5224 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Trbv2A0A0B4J1G8 Thap4-206ENSMUST00000190116 5558 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Trbv2A0A0B4J1G8 9130213A22Rik-201ENSMUST00000180487 1581 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Trbv2A0A0B4J1G8 Gm15043-201ENSMUST00000118843 1543 ntBASIC18.55■□□□□ 0.56
Trbv2A0A0B4J1G8 Zcchc2-202ENSMUST00000119166 6368 ntAPPRIS ALT2 TSL 1 (best) BASIC18.55■□□□□ 0.56
Trbv2A0A0B4J1G8 Grsf1-201ENSMUST00000078945 2538 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Trbv2A0A0B4J1G8 Dgat1-201ENSMUST00000023214 1888 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Trbv2A0A0B4J1G8 Hnrnpul1-202ENSMUST00000108401 1240 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
Trbv2A0A0B4J1G8 Scarna2-201ENSMUST00000157560 414 ntBASIC18.55■□□□□ 0.56
Trbv2A0A0B4J1G8 B3galnt1-201ENSMUST00000061826 2028 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Trbv2A0A0B4J1G8 Setd4-201ENSMUST00000023669 1816 ntAPPRIS P1 TSL 5 BASIC18.55■□□□□ 0.56
Trbv2A0A0B4J1G8 Txnrd2-213ENSMUST00000178093 1785 ntTSL 5 BASIC18.55■□□□□ 0.56
Trbv2A0A0B4J1G8 Slc35f3-201ENSMUST00000108759 2309 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Trbv2A0A0B4J1G8 Zcchc2-201ENSMUST00000118196 5796 ntAPPRIS P4 TSL 5 BASIC18.55■□□□□ 0.56
Trbv2A0A0B4J1G8 Gm4430-201ENSMUST00000192413 1943 ntBASIC18.55■□□□□ 0.56
Trbv2A0A0B4J1G8 Bcl10-201ENSMUST00000029842 1949 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Trbv2A0A0B4J1G8 Magi3-202ENSMUST00000121198 5912 ntAPPRIS ALT2 TSL 5 BASIC18.55■□□□□ 0.56
Trbv2A0A0B4J1G8 Morf4l1-202ENSMUST00000169860 1824 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Trbv2A0A0B4J1G8 Map4k3-202ENSMUST00000112389 4231 ntAPPRIS ALT1 TSL 5 BASIC18.54■□□□□ 0.56
Trbv2A0A0B4J1G8 Gm16437-201ENSMUST00000025669 507 ntBASIC18.54■□□□□ 0.56
Trbv2A0A0B4J1G8 Stac-201ENSMUST00000035083 2644 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Trbv2A0A0B4J1G8 Gab2-202ENSMUST00000206791 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC18.54■□□□□ 0.56
Trbv2A0A0B4J1G8 Pcgf6-201ENSMUST00000026032 2098 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Trbv2A0A0B4J1G8 Hmox2-202ENSMUST00000118885 1392 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Trbv2A0A0B4J1G8 Cbln2-201ENSMUST00000068423 2475 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Trbv2A0A0B4J1G8 Cavin3-201ENSMUST00000047040 1662 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Trbv2A0A0B4J1G8 Lzts2-202ENSMUST00000178087 2773 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Trbv2A0A0B4J1G8 Tead2-201ENSMUST00000033060 2140 ntAPPRIS P3 TSL 1 (best) BASIC18.53■□□□□ 0.56
Trbv2A0A0B4J1G8 Stradb-202ENSMUST00000114296 1348 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
Trbv2A0A0B4J1G8 Llph-202ENSMUST00000130198 1463 ntAPPRIS P1 TSL 3 BASIC18.53■□□□□ 0.56
Trbv2A0A0B4J1G8 Fgfbp3-201ENSMUST00000057337 1772 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Trbv2A0A0B4J1G8 Dgcr6-207ENSMUST00000151266 1086 ntAPPRIS ALT1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Trbv2A0A0B4J1G8 Gadd45g-201ENSMUST00000021903 1071 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Trbv2A0A0B4J1G8 Ptov1-201ENSMUST00000046575 1883 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Trbv2A0A0B4J1G8 Cotl1-202ENSMUST00000168698 1520 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Trbv2A0A0B4J1G8 Dirc2-201ENSMUST00000023554 5395 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Trbv2A0A0B4J1G8 Prkab1-201ENSMUST00000031486 2089 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Trbv2A0A0B4J1G8 Tbc1d2b-201ENSMUST00000041767 5956 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Trbv2A0A0B4J1G8 Sh2d4b-202ENSMUST00000096000 1597 ntAPPRIS P2 TSL 1 (best) BASIC18.52■□□□□ 0.56
Trbv2A0A0B4J1G8 Gm26660-201ENSMUST00000181582 2543 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
Trbv2A0A0B4J1G8 Shc4-202ENSMUST00000110477 1988 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
Trbv2A0A0B4J1G8 Gsc2-201ENSMUST00000012279 1172 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Trbv2A0A0B4J1G8 Tmem178-201ENSMUST00000025092 1696 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Trbv2A0A0B4J1G8 Ankrd33b-203ENSMUST00000110410 2070 ntAPPRIS P3 TSL 1 (best) BASIC18.52■□□□□ 0.56
Trbv2A0A0B4J1G8 Agap2-202ENSMUST00000217941 5573 ntAPPRIS ALT2 TSL 1 (best) BASIC18.52■□□□□ 0.55
Trbv2A0A0B4J1G8 Lsr-205ENSMUST00000205961 2021 ntAPPRIS P3 TSL 1 (best) BASIC18.52■□□□□ 0.55
Trbv2A0A0B4J1G8 Auh-204ENSMUST00000120535 1647 ntTSL 1 (best) BASIC18.52■□□□□ 0.55
Trbv2A0A0B4J1G8 Cbx3-201ENSMUST00000031862 1889 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
Trbv2A0A0B4J1G8 Cdkl3-210ENSMUST00000121591 2387 ntAPPRIS ALT2 TSL 1 (best) BASIC18.52■□□□□ 0.55
Trbv2A0A0B4J1G8 Mcmbp-202ENSMUST00000119081 2347 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
Trbv2A0A0B4J1G8 Cltb-202ENSMUST00000091609 2186 ntAPPRIS P3 TSL 1 (best) BASIC18.51■□□□□ 0.55
Trbv2A0A0B4J1G8 Pex7-203ENSMUST00000166511 1047 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
Trbv2A0A0B4J1G8 Prrt1-201ENSMUST00000015620 1940 ntAPPRIS P1 TSL 5 BASIC18.51■□□□□ 0.55
Trbv2A0A0B4J1G8 Hccs-202ENSMUST00000112115 2473 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Trbv2A0A0B4J1G8 Rora-202ENSMUST00000113624 2591 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Trbv2A0A0B4J1G8 Lrrc38-201ENSMUST00000052458 2324 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Trbv2A0A0B4J1G8 Tlx2-202ENSMUST00000174674 1514 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
Trbv2A0A0B4J1G8 Btbd17-201ENSMUST00000000206 1717 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Trbv2A0A0B4J1G8 Gnas-205ENSMUST00000109083 730 ntTSL 2 BASIC18.5■□□□□ 0.55
Trbv2A0A0B4J1G8 AC116713.1-201ENSMUST00000215074 430 ntBASIC18.5■□□□□ 0.55
Trbv2A0A0B4J1G8 Galr3-201ENSMUST00000058004 1245 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Trbv2A0A0B4J1G8 Inpp5a-203ENSMUST00000106098 2826 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Trbv2A0A0B4J1G8 Dcbld2-201ENSMUST00000046663 6561 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Trbv2A0A0B4J1G8 Lipt2-201ENSMUST00000032967 1663 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Trbv2A0A0B4J1G8 Arhgap23-201ENSMUST00000093940 2409 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
Trbv2A0A0B4J1G8 Doc2a-201ENSMUST00000064110 2538 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Trbv2A0A0B4J1G8 Trp53rka-201ENSMUST00000039007 1880 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Trbv2A0A0B4J1G8 Ccnd3-218ENSMUST00000183177 2060 ntAPPRIS P1 TSL 5 BASIC18.5■□□□□ 0.55
Retrieved 100 of 76,532 protein–RNA pairs in 20.4 ms