Protein–RNA interactions for Protein: A0A0A6YXC3

Ighv1-52, Immunoglobulin heavy variable 1-52 (Fragment), mousemouse

Predictions only

Length 117 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ighv1-52A0A0A6YXC3 Dact1-202ENSMUST00000150639 2448 ntAPPRIS P1 TSL 3 BASIC15.93■□□□□ 0.14
Ighv1-52A0A0A6YXC3 Fastk-201ENSMUST00000030800 1893 ntAPPRIS P2 TSL 1 (best) BASIC15.93■□□□□ 0.14
Ighv1-52A0A0A6YXC3 Rnf111-204ENSMUST00000213647 4961 ntAPPRIS ALT2 TSL 1 (best) BASIC15.92■□□□□ 0.14
Ighv1-52A0A0A6YXC3 Cadps-202ENSMUST00000112657 5455 ntAPPRIS ALT2 TSL 5 BASIC15.92■□□□□ 0.14
Ighv1-52A0A0A6YXC3 Gt(ROSA)26Sor-201ENSMUST00000124246 1181 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
Ighv1-52A0A0A6YXC3 Bub3-205ENSMUST00000208571 747 ntTSL 5 BASIC15.92■□□□□ 0.14
Ighv1-52A0A0A6YXC3 H2-Q2-201ENSMUST00000074806 1262 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
Ighv1-52A0A0A6YXC3 Foxj3-206ENSMUST00000138845 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC15.92■□□□□ 0.14
Ighv1-52A0A0A6YXC3 Impdh1-201ENSMUST00000078155 2437 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
Ighv1-52A0A0A6YXC3 Tle1-205ENSMUST00000107337 2067 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
Ighv1-52A0A0A6YXC3 Mcoln1-201ENSMUST00000004683 2065 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Ighv1-52A0A0A6YXC3 Glp1r-201ENSMUST00000114574 1480 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Ighv1-52A0A0A6YXC3 2210011C24Rik-204ENSMUST00000190457 1351 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Ighv1-52A0A0A6YXC3 Alkal2-201ENSMUST00000067087 1509 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Ighv1-52A0A0A6YXC3 Mfn1-201ENSMUST00000091257 4562 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Ighv1-52A0A0A6YXC3 Clta-206ENSMUST00000170241 1079 ntAPPRIS ALT2 TSL 1 (best) BASIC15.91■□□□□ 0.14
Ighv1-52A0A0A6YXC3 D130020L05Rik-203ENSMUST00000221044 803 ntTSL 2 BASIC15.91■□□□□ 0.14
Ighv1-52A0A0A6YXC3 Rabac1-201ENSMUST00000076961 899 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Ighv1-52A0A0A6YXC3 Slc9a7-202ENSMUST00000115393 2152 ntAPPRIS ALT2 TSL 1 (best) BASIC15.91■□□□□ 0.14
Ighv1-52A0A0A6YXC3 Dus1l-209ENSMUST00000167023 1909 ntAPPRIS P2 TSL 1 (best) BASIC15.91■□□□□ 0.14
Ighv1-52A0A0A6YXC3 Dus1l-201ENSMUST00000026151 1930 ntAPPRIS ALT2 TSL 5 BASIC15.91■□□□□ 0.14
Ighv1-52A0A0A6YXC3 Ccdc92-201ENSMUST00000036206 2473 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Ighv1-52A0A0A6YXC3 Begain-203ENSMUST00000190647 2707 ntAPPRIS P2 TSL 1 (best) BASIC15.9■□□□□ 0.14
Ighv1-52A0A0A6YXC3 Slc16a11-205ENSMUST00000126388 1938 ntAPPRIS P1 TSL 5 BASIC15.9■□□□□ 0.14
Ighv1-52A0A0A6YXC3 Rnf187-201ENSMUST00000094151 1949 ntAPPRIS ALT2 TSL 1 (best) BASIC15.9■□□□□ 0.14
Ighv1-52A0A0A6YXC3 B4galt6-201ENSMUST00000070080 5808 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Ighv1-52A0A0A6YXC3 Klhl22-201ENSMUST00000117192 2754 ntTSL 5 BASIC15.9■□□□□ 0.14
Ighv1-52A0A0A6YXC3 Tbc1d2b-201ENSMUST00000041767 5956 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Ighv1-52A0A0A6YXC3 Hrasls-204ENSMUST00000162747 854 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Ighv1-52A0A0A6YXC3 Gadd45a-207ENSMUST00000204369 716 ntTSL 5 BASIC15.9■□□□□ 0.14
Ighv1-52A0A0A6YXC3 Bex1-201ENSMUST00000058125 866 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Ighv1-52A0A0A6YXC3 Hlx-201ENSMUST00000048572 2278 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Ighv1-52A0A0A6YXC3 AW121686-201ENSMUST00000181049 2200 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
Ighv1-52A0A0A6YXC3 Maf1-201ENSMUST00000023212 1686 ntAPPRIS P2 TSL 1 (best) BASIC15.89■□□□□ 0.13
Ighv1-52A0A0A6YXC3 Hmg20b-203ENSMUST00000105324 1540 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Ighv1-52A0A0A6YXC3 Cacna2d2-205ENSMUST00000168532 5807 ntAPPRIS ALT2 TSL 1 (best) BASIC15.89■□□□□ 0.13
Ighv1-52A0A0A6YXC3 Fkbp1b-201ENSMUST00000020964 976 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Ighv1-52A0A0A6YXC3 Kcnip3-202ENSMUST00000088538 1296 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Ighv1-52A0A0A6YXC3 Magi3-202ENSMUST00000121198 5912 ntAPPRIS ALT2 TSL 5 BASIC15.89■□□□□ 0.13
Ighv1-52A0A0A6YXC3 Pim3-201ENSMUST00000042818 2419 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Ighv1-52A0A0A6YXC3 Pitx2-202ENSMUST00000042587 2271 ntAPPRIS ALT1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Ighv1-52A0A0A6YXC3 Slc17a7-201ENSMUST00000085374 2915 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Ighv1-52A0A0A6YXC3 Dirc2-201ENSMUST00000023554 5395 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Ighv1-52A0A0A6YXC3 Tarbp2-201ENSMUST00000023813 1523 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Ighv1-52A0A0A6YXC3 Lbx1-201ENSMUST00000099401 2484 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Ighv1-52A0A0A6YXC3 AC164883.3-201ENSMUST00000227396 1774 ntBASIC15.88■□□□□ 0.13
Ighv1-52A0A0A6YXC3 Dleu2-201ENSMUST00000180377 1165 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
Ighv1-52A0A0A6YXC3 Dleu2-209ENSMUST00000182957 352 ntTSL 2 BASIC15.88■□□□□ 0.13
Ighv1-52A0A0A6YXC3 Acsl6-209ENSMUST00000108904 2594 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
Ighv1-52A0A0A6YXC3 Ergic1-206ENSMUST00000167662 2754 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Ighv1-52A0A0A6YXC3 Drd4-201ENSMUST00000026569 2799 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Ighv1-52A0A0A6YXC3 Gm10620-201ENSMUST00000098379 1332 ntBASIC15.88■□□□□ 0.13
Ighv1-52A0A0A6YXC3 Btbd17-201ENSMUST00000000206 1717 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Ighv1-52A0A0A6YXC3 Sox2-201ENSMUST00000099151 2057 ntAPPRIS P1 BASIC15.87■□□□□ 0.13
Ighv1-52A0A0A6YXC3 Fam193a-202ENSMUST00000180376 5536 ntAPPRIS P5 TSL 5 BASIC15.87■□□□□ 0.13
Ighv1-52A0A0A6YXC3 Bloc1s4-201ENSMUST00000071949 1273 ntAPPRIS P1 BASIC15.87■□□□□ 0.13
Ighv1-52A0A0A6YXC3 Ube2q1-201ENSMUST00000038356 3077 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Ighv1-52A0A0A6YXC3 Tmem150b-201ENSMUST00000086363 1341 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Ighv1-52A0A0A6YXC3 Taf4-204ENSMUST00000227325 4380 ntAPPRIS ALT2 BASIC15.87■□□□□ 0.13
Ighv1-52A0A0A6YXC3 1810010H24Rik-202ENSMUST00000140447 1677 ntAPPRIS ALT2 TSL 5 BASIC15.86■□□□□ 0.13
Ighv1-52A0A0A6YXC3 Gimap1-201ENSMUST00000054368 1493 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Ighv1-52A0A0A6YXC3 Tmem45b-201ENSMUST00000048050 1799 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Ighv1-52A0A0A6YXC3 Maf-202ENSMUST00000109104 6360 ntAPPRIS P2 BASIC15.86■□□□□ 0.13
Ighv1-52A0A0A6YXC3 Sin3b-203ENSMUST00000212095 1257 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
Ighv1-52A0A0A6YXC3 Gm5131-201ENSMUST00000212776 1238 ntBASIC15.86■□□□□ 0.13
Ighv1-52A0A0A6YXC3 AC164424.2-201ENSMUST00000223281 725 ntTSL 3 BASIC15.86■□□□□ 0.13
Ighv1-52A0A0A6YXC3 Gm40881-201ENSMUST00000223397 166 ntBASIC15.86■□□□□ 0.13
Ighv1-52A0A0A6YXC3 Mt2-201ENSMUST00000034214 511 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Ighv1-52A0A0A6YXC3 Phf14-203ENSMUST00000115511 3336 ntAPPRIS P1 TSL 5 BASIC15.86■□□□□ 0.13
Ighv1-52A0A0A6YXC3 Pgk1-201ENSMUST00000081593 1825 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Ighv1-52A0A0A6YXC3 Cotl1-201ENSMUST00000034285 1596 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Ighv1-52A0A0A6YXC3 Rgs6-202ENSMUST00000161801 2141 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
Ighv1-52A0A0A6YXC3 Gm26775-201ENSMUST00000180684 2197 ntTSL 5 BASIC15.86■□□□□ 0.13
Ighv1-52A0A0A6YXC3 Spats2-201ENSMUST00000063517 3065 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Ighv1-52A0A0A6YXC3 Aebp2-203ENSMUST00000095350 2575 ntAPPRIS ALT2 TSL 1 (best) BASIC15.85■□□□□ 0.13
Ighv1-52A0A0A6YXC3 Spire2-201ENSMUST00000010298 2330 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Ighv1-52A0A0A6YXC3 Cblc-202ENSMUST00000108449 1514 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
Ighv1-52A0A0A6YXC3 Pgls-205ENSMUST00000143441 1062 ntTSL 3 BASIC15.85■□□□□ 0.13
Ighv1-52A0A0A6YXC3 Nnat-207ENSMUST00000173041 760 ntTSL 5 BASIC15.85■□□□□ 0.13
Ighv1-52A0A0A6YXC3 Camk2n2-201ENSMUST00000052939 1291 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Ighv1-52A0A0A6YXC3 1700016K19Rik-201ENSMUST00000066408 921 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Ighv1-52A0A0A6YXC3 Hmbox1-204ENSMUST00000175905 1715 ntTSL 5 BASIC15.85■□□□□ 0.13
Ighv1-52A0A0A6YXC3 Msx3-202ENSMUST00000172775 2070 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Ighv1-52A0A0A6YXC3 Chrna7-201ENSMUST00000032738 2078 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Ighv1-52A0A0A6YXC3 Lgi2-202ENSMUST00000199942 6273 ntAPPRIS ALT2 TSL 1 (best) BASIC15.85■□□□□ 0.13
Ighv1-52A0A0A6YXC3 Mfsd4b2-201ENSMUST00000045526 2285 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Ighv1-52A0A0A6YXC3 Selenof-201ENSMUST00000082437 1514 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Ighv1-52A0A0A6YXC3 Lmtk3-202ENSMUST00000120005 4997 ntAPPRIS P2 TSL 1 (best) BASIC15.84■□□□□ 0.13
Ighv1-52A0A0A6YXC3 Dcaf15-201ENSMUST00000041367 2312 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
Ighv1-52A0A0A6YXC3 Trim9-208ENSMUST00000221370 2393 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
Ighv1-52A0A0A6YXC3 Foxd1-201ENSMUST00000105098 5064 ntAPPRIS P1 BASIC15.84■□□□□ 0.13
Ighv1-52A0A0A6YXC3 Ube2e3-202ENSMUST00000121433 1235 ntAPPRIS P1 TSL 5 BASIC15.84■□□□□ 0.13
Ighv1-52A0A0A6YXC3 Rap1a-202ENSMUST00000197094 782 ntTSL 3 BASIC15.84■□□□□ 0.13
Ighv1-52A0A0A6YXC3 Pxmp2-201ENSMUST00000031472 1041 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Ighv1-52A0A0A6YXC3 Barhl1-202ENSMUST00000113847 2160 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Ighv1-52A0A0A6YXC3 Cbln2-204ENSMUST00000169470 2201 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Ighv1-52A0A0A6YXC3 Fam20b-202ENSMUST00000122424 4532 ntAPPRIS P1 TSL 5 BASIC15.84■□□□□ 0.13
Ighv1-52A0A0A6YXC3 Gse1-203ENSMUST00000120493 4610 ntAPPRIS ALT2 TSL 1 (best) BASIC15.84■□□□□ 0.13
Ighv1-52A0A0A6YXC3 Timmdc1-201ENSMUST00000002925 1573 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.13
Ighv1-52A0A0A6YXC3 Whrn-202ENSMUST00000063672 2804 ntTSL 1 (best) BASIC15.83■□□□□ 0.13
Retrieved 100 of 76,532 protein–RNA pairs in 22.6 ms