Protein–RNA interactions for Protein: A0A075B6B9

Trav6d-5, T cell receptor alpha variable 6D-5 (Fragment), mousemouse

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav6d-5A0A075B6B9 Qsox2-201ENSMUST00000036187 2559 ntAPPRIS P1 TSL 5 BASIC16.93■□□□□ 0.3
Trav6d-5A0A075B6B9 Prkab1-201ENSMUST00000031486 2089 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Trav6d-5A0A075B6B9 Mroh6-201ENSMUST00000184858 2216 ntAPPRIS P1 TSL 5 BASIC16.93■□□□□ 0.3
Trav6d-5A0A075B6B9 4930500M09Rik-202ENSMUST00000194988 1563 ntBASIC16.93■□□□□ 0.3
Trav6d-5A0A075B6B9 Supv3l1-201ENSMUST00000020273 2604 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Trav6d-5A0A075B6B9 Ndel1-201ENSMUST00000018880 2382 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Trav6d-5A0A075B6B9 Mpnd-204ENSMUST00000149441 1701 ntAPPRIS P2 TSL 1 (best) BASIC16.93■□□□□ 0.3
Trav6d-5A0A075B6B9 Tead2-201ENSMUST00000033060 2140 ntAPPRIS P3 TSL 1 (best) BASIC16.93■□□□□ 0.3
Trav6d-5A0A075B6B9 Nkpd1-203ENSMUST00000214205 2309 ntAPPRIS ALT2 TSL 5 BASIC16.92■□□□□ 0.3
Trav6d-5A0A075B6B9 Ankrd33b-203ENSMUST00000110410 2070 ntAPPRIS P3 TSL 1 (best) BASIC16.92■□□□□ 0.3
Trav6d-5A0A075B6B9 4932443I19Rik-201ENSMUST00000166277 799 ntAPPRIS P2 TSL 1 (best) BASIC16.92■□□□□ 0.3
Trav6d-5A0A075B6B9 Ppcs-201ENSMUST00000030385 1443 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Trav6d-5A0A075B6B9 Gjc2-202ENSMUST00000108793 2187 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Trav6d-5A0A075B6B9 Kazald1-202ENSMUST00000111948 1625 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Trav6d-5A0A075B6B9 Rnf166-201ENSMUST00000014614 1783 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Trav6d-5A0A075B6B9 Lsm14a-201ENSMUST00000085585 2944 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Trav6d-5A0A075B6B9 Suz12-206ENSMUST00000163272 4303 ntAPPRIS ALT2 TSL 5 BASIC16.91■□□□□ 0.3
Trav6d-5A0A075B6B9 Rpf2-201ENSMUST00000045114 1853 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
Trav6d-5A0A075B6B9 Cdkl3-210ENSMUST00000121591 2387 ntAPPRIS ALT2 TSL 1 (best) BASIC16.91■□□□□ 0.3
Trav6d-5A0A075B6B9 Rpl31-203ENSMUST00000179954 630 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Trav6d-5A0A075B6B9 Gab2-202ENSMUST00000206791 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC16.91■□□□□ 0.3
Trav6d-5A0A075B6B9 Cdan1-201ENSMUST00000110700 5996 ntAPPRIS ALT2 TSL 5 BASIC16.91■□□□□ 0.3
Trav6d-5A0A075B6B9 Med25-201ENSMUST00000003049 2619 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
Trav6d-5A0A075B6B9 Irx2-201ENSMUST00000074372 2625 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Trav6d-5A0A075B6B9 6330420H09Rik-201ENSMUST00000211371 1316 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
Trav6d-5A0A075B6B9 Cops7a-201ENSMUST00000032220 1817 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Trav6d-5A0A075B6B9 Shox2-201ENSMUST00000029422 3079 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Trav6d-5A0A075B6B9 2310022B05Rik-201ENSMUST00000034464 3307 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Trav6d-5A0A075B6B9 Baiap2-203ENSMUST00000103021 3398 ntAPPRIS ALT2 TSL 1 (best) BASIC16.9■□□□□ 0.3
Trav6d-5A0A075B6B9 Gm15441-202ENSMUST00000107095 1653 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
Trav6d-5A0A075B6B9 Tmem178-201ENSMUST00000025092 1696 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Trav6d-5A0A075B6B9 Crtc2-201ENSMUST00000029545 2747 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Trav6d-5A0A075B6B9 Rell2-202ENSMUST00000091932 1995 ntTSL 2 BASIC16.89■□□□□ 0.3
Trav6d-5A0A075B6B9 E4f1-201ENSMUST00000056032 2574 ntAPPRIS P2 TSL 1 (best) BASIC16.89■□□□□ 0.3
Trav6d-5A0A075B6B9 B3galnt1-201ENSMUST00000061826 2028 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Trav6d-5A0A075B6B9 Rab3ip-203ENSMUST00000219109 1844 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Trav6d-5A0A075B6B9 Ctsz-201ENSMUST00000016400 1441 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Trav6d-5A0A075B6B9 1700034H15Rik-201ENSMUST00000069573 1461 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
Trav6d-5A0A075B6B9 Fam20b-201ENSMUST00000086153 4414 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Trav6d-5A0A075B6B9 Dvl1-201ENSMUST00000030948 3358 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Trav6d-5A0A075B6B9 Wbp1-208ENSMUST00000151393 837 ntTSL 3 BASIC16.89■□□□□ 0.29
Trav6d-5A0A075B6B9 Msl3l2-201ENSMUST00000063138 2140 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Trav6d-5A0A075B6B9 Tada1-201ENSMUST00000027846 2215 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Trav6d-5A0A075B6B9 Acsl3-203ENSMUST00000134566 2492 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
Trav6d-5A0A075B6B9 Ppp3ca-202ENSMUST00000070198 4758 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
Trav6d-5A0A075B6B9 Erc1-202ENSMUST00000079582 2304 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
Trav6d-5A0A075B6B9 Zbed3-201ENSMUST00000045909 1894 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Trav6d-5A0A075B6B9 Hnrnpf-202ENSMUST00000163168 2401 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Trav6d-5A0A075B6B9 Tcf7l1-201ENSMUST00000069536 3042 ntAPPRIS P3 TSL 1 (best) BASIC16.88■□□□□ 0.29
Trav6d-5A0A075B6B9 Rbfox3-204ENSMUST00000106278 1542 ntAPPRIS ALT2 TSL 1 (best) BASIC16.88■□□□□ 0.29
Trav6d-5A0A075B6B9 Nup153-201ENSMUST00000021803 6109 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Trav6d-5A0A075B6B9 Ccdc34-201ENSMUST00000028580 2070 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Trav6d-5A0A075B6B9 Senp6-201ENSMUST00000037484 5111 ntAPPRIS P3 TSL 1 (best) BASIC16.88■□□□□ 0.29
Trav6d-5A0A075B6B9 Rbfa-201ENSMUST00000025462 1377 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Trav6d-5A0A075B6B9 Usp2-206ENSMUST00000176416 1486 ntAPPRIS ALT2 TSL 1 (best) BASIC16.87■□□□□ 0.29
Trav6d-5A0A075B6B9 Akt1-201ENSMUST00000001780 2690 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Trav6d-5A0A075B6B9 Ubxn2a-203ENSMUST00000142867 2146 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Trav6d-5A0A075B6B9 Fance-201ENSMUST00000088007 1581 ntAPPRIS P1 TSL 5 BASIC16.87■□□□□ 0.29
Trav6d-5A0A075B6B9 Nudt3-203ENSMUST00000114886 996 ntTSL 2 BASIC16.87■□□□□ 0.29
Trav6d-5A0A075B6B9 Krtap28-13-201ENSMUST00000188005 992 ntAPPRIS P1 BASIC16.87■□□□□ 0.29
Trav6d-5A0A075B6B9 Fgf16-201ENSMUST00000033581 1645 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Trav6d-5A0A075B6B9 Pcmtd1-201ENSMUST00000061280 5232 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Trav6d-5A0A075B6B9 Lzts2-202ENSMUST00000178087 2773 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Trav6d-5A0A075B6B9 Bag5-201ENSMUST00000054636 2139 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Trav6d-5A0A075B6B9 Fgfbp3-201ENSMUST00000057337 1772 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Trav6d-5A0A075B6B9 A430027H14Rik-201ENSMUST00000191809 1467 ntBASIC16.86■□□□□ 0.29
Trav6d-5A0A075B6B9 Mad2l2-201ENSMUST00000030860 1535 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Trav6d-5A0A075B6B9 9130213A22Rik-201ENSMUST00000180487 1581 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Trav6d-5A0A075B6B9 Htra2-203ENSMUST00000113963 1629 ntTSL 5 BASIC16.86■□□□□ 0.29
Trav6d-5A0A075B6B9 Fam91a1-201ENSMUST00000037270 5560 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Trav6d-5A0A075B6B9 Ppp6r2-202ENSMUST00000226221 2559 ntBASIC16.86■□□□□ 0.29
Trav6d-5A0A075B6B9 AC152827.1-201ENSMUST00000221143 2189 ntBASIC16.86■□□□□ 0.29
Trav6d-5A0A075B6B9 Klc3-204ENSMUST00000108459 1849 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
Trav6d-5A0A075B6B9 Morf4l1-202ENSMUST00000169860 1824 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Trav6d-5A0A075B6B9 Tusc3-201ENSMUST00000167992 1511 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Trav6d-5A0A075B6B9 Gm3558-201ENSMUST00000163790 2055 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Trav6d-5A0A075B6B9 Cdkl3-204ENSMUST00000109077 2605 ntAPPRIS ALT2 TSL 5 BASIC16.85■□□□□ 0.29
Trav6d-5A0A075B6B9 Mprip-202ENSMUST00000072031 8718 ntAPPRIS P4 TSL 1 (best) BASIC16.85■□□□□ 0.29
Trav6d-5A0A075B6B9 Kifc3-201ENSMUST00000034240 3277 ntAPPRIS P4 TSL 1 (best) BASIC16.85■□□□□ 0.29
Trav6d-5A0A075B6B9 Uap1-201ENSMUST00000027981 2283 ntAPPRIS P3 TSL 1 (best) BASIC16.85■□□□□ 0.29
Trav6d-5A0A075B6B9 Bspry-201ENSMUST00000030088 1757 ntAPPRIS P2 TSL 1 (best) BASIC16.85■□□□□ 0.29
Trav6d-5A0A075B6B9 Lsm4-204ENSMUST00000210071 575 ntTSL 5 BASIC16.85■□□□□ 0.29
Trav6d-5A0A075B6B9 Shc4-202ENSMUST00000110477 1988 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
Trav6d-5A0A075B6B9 Rasgrp2-206ENSMUST00000113472 2124 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
Trav6d-5A0A075B6B9 Ipmk-203ENSMUST00000121446 1492 ntAPPRIS ALT2 TSL 5 BASIC16.85■□□□□ 0.29
Trav6d-5A0A075B6B9 Hras-207ENSMUST00000168550 2272 ntTSL 5 BASIC16.85■□□□□ 0.29
Trav6d-5A0A075B6B9 Cavin3-201ENSMUST00000047040 1662 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Trav6d-5A0A075B6B9 Cbx3-201ENSMUST00000031862 1889 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Trav6d-5A0A075B6B9 9230116N13Rik-201ENSMUST00000181746 2097 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
Trav6d-5A0A075B6B9 Gm7432-201ENSMUST00000210343 879 ntBASIC16.84■□□□□ 0.29
Trav6d-5A0A075B6B9 Gm39157-201ENSMUST00000212322 1180 ntTSL 5 BASIC16.84■□□□□ 0.29
Trav6d-5A0A075B6B9 Slc50a1-201ENSMUST00000029565 1022 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Trav6d-5A0A075B6B9 Ndufs3-201ENSMUST00000005647 1046 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Trav6d-5A0A075B6B9 Mum1-201ENSMUST00000020365 2640 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Trav6d-5A0A075B6B9 Wrnip1-201ENSMUST00000021832 2633 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Trav6d-5A0A075B6B9 Rarres1-201ENSMUST00000054825 1325 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Trav6d-5A0A075B6B9 Sox17-202ENSMUST00000116652 1512 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Trav6d-5A0A075B6B9 Trim33-202ENSMUST00000106860 5025 ntAPPRIS ALT2 TSL 1 (best) BASIC16.84■□□□□ 0.29
Trav6d-5A0A075B6B9 Ubl3-202ENSMUST00000164904 2001 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Trav6d-5A0A075B6B9 Lrp3-202ENSMUST00000122409 4147 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
Retrieved 100 of 76,532 protein–RNA pairs in 52.4 ms