Protein–RNA interactions for Protein: A0A075B6A6

Trav6n-7, T cell receptor alpha variable 6N-7 (Fragment), mousemouse

Predictions only

Length 116 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav6n-7A0A075B6A6 Pdf-201ENSMUST00000055316 1306 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Trav6n-7A0A075B6A6 Pptc7-201ENSMUST00000053426 4644 ntAPPRIS P2 TSL 1 (best) BASIC17.77■□□□□ 0.44
Trav6n-7A0A075B6A6 BC005561-201ENSMUST00000096452 5409 ntAPPRIS P1 TSL 2 BASIC17.77■□□□□ 0.44
Trav6n-7A0A075B6A6 Pou3f3-201ENSMUST00000054883 7409 ntAPPRIS P1 BASIC17.77■□□□□ 0.44
Trav6n-7A0A075B6A6 Sox2-201ENSMUST00000099151 2057 ntAPPRIS P1 BASIC17.77■□□□□ 0.44
Trav6n-7A0A075B6A6 Fastk-201ENSMUST00000030800 1893 ntAPPRIS P2 TSL 1 (best) BASIC17.77■□□□□ 0.43
Trav6n-7A0A075B6A6 Magi3-202ENSMUST00000121198 5912 ntAPPRIS ALT2 TSL 5 BASIC17.76■□□□□ 0.43
Trav6n-7A0A075B6A6 Rab28-201ENSMUST00000031011 1635 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Trav6n-7A0A075B6A6 Fip1l1-202ENSMUST00000113534 2140 ntAPPRIS ALT2 TSL 1 (best) BASIC17.76■□□□□ 0.43
Trav6n-7A0A075B6A6 Hrasls-204ENSMUST00000162747 854 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Trav6n-7A0A075B6A6 A730035I17Rik-205ENSMUST00000205851 684 ntBASIC17.76■□□□□ 0.43
Trav6n-7A0A075B6A6 Gm18190-203ENSMUST00000209944 389 ntTSL 2 BASIC17.76■□□□□ 0.43
Trav6n-7A0A075B6A6 AW121686-201ENSMUST00000181049 2200 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
Trav6n-7A0A075B6A6 Tk2-205ENSMUST00000212275 1507 ntAPPRIS P1 TSL 2 BASIC17.76■□□□□ 0.43
Trav6n-7A0A075B6A6 Dus1l-209ENSMUST00000167023 1909 ntAPPRIS P2 TSL 1 (best) BASIC17.76■□□□□ 0.43
Trav6n-7A0A075B6A6 Dus1l-201ENSMUST00000026151 1930 ntAPPRIS ALT2 TSL 5 BASIC17.76■□□□□ 0.43
Trav6n-7A0A075B6A6 Cdan1-201ENSMUST00000110700 5996 ntAPPRIS ALT2 TSL 5 BASIC17.75■□□□□ 0.43
Trav6n-7A0A075B6A6 Chrna7-201ENSMUST00000032738 2078 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Trav6n-7A0A075B6A6 Rnf187-201ENSMUST00000094151 1949 ntAPPRIS ALT2 TSL 1 (best) BASIC17.75■□□□□ 0.43
Trav6n-7A0A075B6A6 Zfp629-208ENSMUST00000151107 583 ntTSL 3 BASIC17.75■□□□□ 0.43
Trav6n-7A0A075B6A6 Alkal2-201ENSMUST00000067087 1509 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Trav6n-7A0A075B6A6 Fbxl3-204ENSMUST00000132004 2534 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
Trav6n-7A0A075B6A6 Tpm1-211ENSMUST00000113695 1607 ntTSL 3 BASIC17.75■□□□□ 0.43
Trav6n-7A0A075B6A6 Trim9-208ENSMUST00000221370 2393 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
Trav6n-7A0A075B6A6 Tbc1d2b-201ENSMUST00000041767 5956 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Trav6n-7A0A075B6A6 Rfx5-205ENSMUST00000107260 2355 ntAPPRIS P1 TSL 5 BASIC17.74■□□□□ 0.43
Trav6n-7A0A075B6A6 Kctd20-201ENSMUST00000057174 2368 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Trav6n-7A0A075B6A6 Map4k3-202ENSMUST00000112389 4231 ntAPPRIS ALT1 TSL 5 BASIC17.74■□□□□ 0.43
Trav6n-7A0A075B6A6 Dmtn-209ENSMUST00000228295 2572 ntBASIC17.74■□□□□ 0.43
Trav6n-7A0A075B6A6 Gt(ROSA)26Sor-201ENSMUST00000124246 1181 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
Trav6n-7A0A075B6A6 Gm10399-202ENSMUST00000202768 748 ntBASIC17.74■□□□□ 0.43
Trav6n-7A0A075B6A6 Lmtk3-202ENSMUST00000120005 4997 ntAPPRIS P2 TSL 1 (best) BASIC17.74■□□□□ 0.43
Trav6n-7A0A075B6A6 2210011C24Rik-204ENSMUST00000190457 1351 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Trav6n-7A0A075B6A6 Tmem41a-201ENSMUST00000023562 1359 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Trav6n-7A0A075B6A6 Inafm2-201ENSMUST00000149978 3053 ntAPPRIS P1 BASIC17.74■□□□□ 0.43
Trav6n-7A0A075B6A6 Gnl1-201ENSMUST00000087200 2848 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Trav6n-7A0A075B6A6 Acsl6-209ENSMUST00000108904 2594 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
Trav6n-7A0A075B6A6 Hmg20b-203ENSMUST00000105324 1540 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Trav6n-7A0A075B6A6 Sucla2-201ENSMUST00000022706 1545 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Trav6n-7A0A075B6A6 Btbd17-201ENSMUST00000000206 1717 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Trav6n-7A0A075B6A6 Drd4-201ENSMUST00000026569 2799 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Trav6n-7A0A075B6A6 Mfn1-201ENSMUST00000091257 4562 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Trav6n-7A0A075B6A6 Clta-206ENSMUST00000170241 1079 ntAPPRIS ALT2 TSL 1 (best) BASIC17.73■□□□□ 0.43
Trav6n-7A0A075B6A6 Bex1-201ENSMUST00000058125 866 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Trav6n-7A0A075B6A6 Glp1r-201ENSMUST00000114574 1480 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Trav6n-7A0A075B6A6 Whrn-208ENSMUST00000119294 2632 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
Trav6n-7A0A075B6A6 Otud5-204ENSMUST00000115667 2708 ntAPPRIS ALT2 TSL 5 BASIC17.73■□□□□ 0.43
Trav6n-7A0A075B6A6 Tmem150b-201ENSMUST00000086363 1341 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Trav6n-7A0A075B6A6 Gm10620-201ENSMUST00000098379 1332 ntBASIC17.72■□□□□ 0.43
Trav6n-7A0A075B6A6 Tarbp2-201ENSMUST00000023813 1523 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Trav6n-7A0A075B6A6 Rgs6-202ENSMUST00000161801 2141 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
Trav6n-7A0A075B6A6 B4galt6-201ENSMUST00000070080 5808 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Trav6n-7A0A075B6A6 Gadd45a-207ENSMUST00000204369 716 ntTSL 5 BASIC17.72■□□□□ 0.43
Trav6n-7A0A075B6A6 Bub3-205ENSMUST00000208571 747 ntTSL 5 BASIC17.72■□□□□ 0.43
Trav6n-7A0A075B6A6 Pgk1-201ENSMUST00000081593 1825 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Trav6n-7A0A075B6A6 Foxj3-206ENSMUST00000138845 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC17.72■□□□□ 0.43
Trav6n-7A0A075B6A6 1810010H24Rik-202ENSMUST00000140447 1677 ntAPPRIS ALT2 TSL 5 BASIC17.71■□□□□ 0.43
Trav6n-7A0A075B6A6 Spire2-201ENSMUST00000010298 2330 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Trav6n-7A0A075B6A6 Bloc1s4-201ENSMUST00000071949 1273 ntAPPRIS P1 BASIC17.71■□□□□ 0.43
Trav6n-7A0A075B6A6 P2rx2-203ENSMUST00000195985 2096 ntAPPRIS P4 TSL 1 (best) BASIC17.7■□□□□ 0.42
Trav6n-7A0A075B6A6 Hmbox1-204ENSMUST00000175905 1715 ntTSL 5 BASIC17.7■□□□□ 0.42
Trav6n-7A0A075B6A6 Maf-202ENSMUST00000109104 6360 ntAPPRIS P2 BASIC17.7■□□□□ 0.42
Trav6n-7A0A075B6A6 Fkbp1b-201ENSMUST00000020964 976 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Trav6n-7A0A075B6A6 D130020L05Rik-203ENSMUST00000221044 803 ntTSL 2 BASIC17.7■□□□□ 0.42
Trav6n-7A0A075B6A6 AC164424.2-201ENSMUST00000223281 725 ntTSL 3 BASIC17.7■□□□□ 0.42
Trav6n-7A0A075B6A6 AC093043.1-201ENSMUST00000226700 898 ntBASIC17.7■□□□□ 0.42
Trav6n-7A0A075B6A6 Ech1-201ENSMUST00000066264 1267 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Trav6n-7A0A075B6A6 Kcnip3-202ENSMUST00000088538 1296 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Trav6n-7A0A075B6A6 Gm32051-202ENSMUST00000197905 2385 ntBASIC17.7■□□□□ 0.42
Trav6n-7A0A075B6A6 AC164883.3-201ENSMUST00000227396 1774 ntBASIC17.7■□□□□ 0.42
Trav6n-7A0A075B6A6 Senp6-201ENSMUST00000037484 5111 ntAPPRIS P3 TSL 1 (best) BASIC17.7■□□□□ 0.42
Trav6n-7A0A075B6A6 Fam60a-202ENSMUST00000081956 2737 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Trav6n-7A0A075B6A6 Gimap1-201ENSMUST00000054368 1493 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Trav6n-7A0A075B6A6 March8-204ENSMUST00000123405 2102 ntTSL 5 BASIC17.69■□□□□ 0.42
Trav6n-7A0A075B6A6 Selenof-201ENSMUST00000082437 1514 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Trav6n-7A0A075B6A6 Msx3-202ENSMUST00000172775 2070 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Trav6n-7A0A075B6A6 9230116N13Rik-201ENSMUST00000181746 2097 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
Trav6n-7A0A075B6A6 Ammecr1-201ENSMUST00000041317 5437 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Trav6n-7A0A075B6A6 Srsf6-202ENSMUST00000126163 515 ntTSL 5 BASIC17.69■□□□□ 0.42
Trav6n-7A0A075B6A6 Dleu2-201ENSMUST00000180377 1165 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
Trav6n-7A0A075B6A6 Dleu2-209ENSMUST00000182957 352 ntTSL 2 BASIC17.69■□□□□ 0.42
Trav6n-7A0A075B6A6 Camk2n2-201ENSMUST00000052939 1291 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Trav6n-7A0A075B6A6 Slc1a5-201ENSMUST00000108496 2764 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Trav6n-7A0A075B6A6 Rnf111-204ENSMUST00000213647 4961 ntAPPRIS ALT2 TSL 1 (best) BASIC17.69■□□□□ 0.42
Trav6n-7A0A075B6A6 Barhl1-202ENSMUST00000113847 2160 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Trav6n-7A0A075B6A6 Lgi2-202ENSMUST00000199942 6273 ntAPPRIS ALT2 TSL 1 (best) BASIC17.69■□□□□ 0.42
Trav6n-7A0A075B6A6 Dirc2-201ENSMUST00000023554 5395 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Trav6n-7A0A075B6A6 Whrn-202ENSMUST00000063672 2804 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
Trav6n-7A0A075B6A6 Dact1-202ENSMUST00000150639 2448 ntAPPRIS P1 TSL 3 BASIC17.68■□□□□ 0.42
Trav6n-7A0A075B6A6 Sin3b-203ENSMUST00000212095 1257 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
Trav6n-7A0A075B6A6 1700016K19Rik-201ENSMUST00000066408 921 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Trav6n-7A0A075B6A6 Sh3bp1-203ENSMUST00000089378 2001 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Trav6n-7A0A075B6A6 Cacna2d2-205ENSMUST00000168532 5807 ntAPPRIS ALT2 TSL 1 (best) BASIC17.68■□□□□ 0.42
Trav6n-7A0A075B6A6 Kcnj12-202ENSMUST00000089184 2291 ntAPPRIS P3 TSL 1 (best) BASIC17.68■□□□□ 0.42
Trav6n-7A0A075B6A6 Chsy1-201ENSMUST00000036372 4176 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Trav6n-7A0A075B6A6 Porcn-203ENSMUST00000089402 1839 ntAPPRIS ALT1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Trav6n-7A0A075B6A6 Htra2-201ENSMUST00000089645 1725 ntAPPRIS P2 TSL 1 (best) BASIC17.67■□□□□ 0.42
Trav6n-7A0A075B6A6 Ndrg2-202ENSMUST00000111632 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Trav6n-7A0A075B6A6 Nnat-207ENSMUST00000173041 760 ntTSL 5 BASIC17.67■□□□□ 0.42
Trav6n-7A0A075B6A6 Gpx7-202ENSMUST00000184609 331 ntTSL 3 BASIC17.67■□□□□ 0.42
Retrieved 100 of 76,532 protein–RNA pairs in 13.7 ms