Protein–RNA interactions for Protein: A0A075B653

Trav16, T cell receptor alpha variable 16 (Fragment), mousemouse

Predictions only

Length 116 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav16A0A075B653 Gtf2a2-203ENSMUST00000119413 1034 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Trav16A0A075B653 Cib1-201ENSMUST00000065163 1047 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Trav16A0A075B653 Srarp-201ENSMUST00000094544 905 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Trav16A0A075B653 Txndc9-207ENSMUST00000195032 1444 ntAPPRIS P1 TSL 2 BASIC16.07■□□□□ 0.16
Trav16A0A075B653 Runx2-211ENSMUST00000162629 1607 ntAPPRIS ALT2 TSL 5 BASIC16.07■□□□□ 0.16
Trav16A0A075B653 Tmem164-205ENSMUST00000112891 1654 ntTSL 5 BASIC16.07■□□□□ 0.16
Trav16A0A075B653 Maf1-201ENSMUST00000023212 1686 ntAPPRIS P2 TSL 1 (best) BASIC16.07■□□□□ 0.16
Trav16A0A075B653 Atrn-201ENSMUST00000028781 8745 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Trav16A0A075B653 Dnajb2-207ENSMUST00000188290 1855 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Trav16A0A075B653 Wnk2-211ENSMUST00000162581 6628 ntAPPRIS ALT2 TSL 5 BASIC16.07■□□□□ 0.16
Trav16A0A075B653 Nlgn2-201ENSMUST00000056484 5003 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Trav16A0A075B653 Gja3-201ENSMUST00000061614 2766 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Trav16A0A075B653 St3gal5-202ENSMUST00000114112 2439 ntAPPRIS ALT2 TSL 1 (best) BASIC16.06■□□□□ 0.16
Trav16A0A075B653 Raph1-202ENSMUST00000090293 2409 ntAPPRIS ALT2 TSL 5 BASIC16.06■□□□□ 0.16
Trav16A0A075B653 Arf4-201ENSMUST00000022429 2165 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Trav16A0A075B653 Snapin-203ENSMUST00000149884 1928 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Trav16A0A075B653 Puf60-202ENSMUST00000100527 1878 ntAPPRIS P4 TSL 1 (best) BASIC16.06■□□□□ 0.16
Trav16A0A075B653 Faap24-201ENSMUST00000032704 1857 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Trav16A0A075B653 Gm10837-201ENSMUST00000100294 1536 ntAPPRIS P1 BASIC16.06■□□□□ 0.16
Trav16A0A075B653 2510046G10Rik-202ENSMUST00000187458 1052 ntBASIC16.06■□□□□ 0.16
Trav16A0A075B653 AC150314.2-201ENSMUST00000214135 834 ntTSL 5 BASIC16.06■□□□□ 0.16
Trav16A0A075B653 Gab1-201ENSMUST00000034150 4870 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Trav16A0A075B653 Ndel1-201ENSMUST00000018880 2382 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Trav16A0A075B653 Kctd20-201ENSMUST00000057174 2368 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Trav16A0A075B653 Spint1-201ENSMUST00000028783 2273 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Trav16A0A075B653 Slc35b2-205ENSMUST00000224905 1906 ntAPPRIS P1 BASIC16.06■□□□□ 0.16
Trav16A0A075B653 Krt8-201ENSMUST00000023952 1805 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Trav16A0A075B653 Ptpn18-201ENSMUST00000027302 1559 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Trav16A0A075B653 Ptf1a-201ENSMUST00000028068 1508 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Trav16A0A075B653 6330420H09Rik-201ENSMUST00000211371 1316 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
Trav16A0A075B653 Rell2-210ENSMUST00000176104 2150 ntAPPRIS P1 TSL 5 BASIC16.05■□□□□ 0.16
Trav16A0A075B653 Trappc6b-201ENSMUST00000021380 1255 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Trav16A0A075B653 Ell3-201ENSMUST00000028679 2115 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Trav16A0A075B653 Galr2-201ENSMUST00000055872 1940 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Trav16A0A075B653 Anp32b-201ENSMUST00000102926 1716 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Trav16A0A075B653 Hook1-202ENSMUST00000107083 1506 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
Trav16A0A075B653 Hdgfl3-202ENSMUST00000107305 5887 ntAPPRIS P2 TSL 1 (best) BASIC16.04■□□□□ 0.16
Trav16A0A075B653 Pkd1-207ENSMUST00000228550 1050 ntBASIC16.04■□□□□ 0.16
Trav16A0A075B653 Gorasp2-201ENSMUST00000028509 2238 ntAPPRIS P2 TSL 1 (best) BASIC16.04■□□□□ 0.16
Trav16A0A075B653 En2-201ENSMUST00000036177 3539 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Trav16A0A075B653 Xylt1-201ENSMUST00000032892 9020 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Trav16A0A075B653 Bnc2-214ENSMUST00000176612 3963 ntTSL 5 BASIC16.03■□□□□ 0.16
Trav16A0A075B653 Nudt3-201ENSMUST00000025050 2193 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Trav16A0A075B653 Tmem263-201ENSMUST00000095383 3616 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Trav16A0A075B653 Whrn-204ENSMUST00000095037 2419 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
Trav16A0A075B653 Ugp2-201ENSMUST00000060895 2044 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
Trav16A0A075B653 Gm7432-201ENSMUST00000210343 879 ntBASIC16.03■□□□□ 0.16
Trav16A0A075B653 Sos1-201ENSMUST00000068714 8919 ntAPPRIS P1 TSL 2 BASIC16.03■□□□□ 0.16
Trav16A0A075B653 Sirt1-207ENSMUST00000177694 3353 ntTSL 5 BASIC16.03■□□□□ 0.16
Trav16A0A075B653 Rbm34-203ENSMUST00000212618 1509 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
Trav16A0A075B653 Spryd7-202ENSMUST00000100496 1459 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
Trav16A0A075B653 Gm43403-201ENSMUST00000198011 1786 ntBASIC16.03■□□□□ 0.16
Trav16A0A075B653 Stim2-201ENSMUST00000117661 4934 ntAPPRIS P2 TSL 1 (best) BASIC16.02■□□□□ 0.16
Trav16A0A075B653 Map4k3-201ENSMUST00000025089 4225 ntAPPRIS P2 TSL 5 BASIC16.02■□□□□ 0.16
Trav16A0A075B653 Ank1-202ENSMUST00000084038 8147 ntAPPRIS P3 TSL 1 (best) BASIC16.02■□□□□ 0.16
Trav16A0A075B653 Zfp821-201ENSMUST00000034163 2127 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
Trav16A0A075B653 Aktip-205ENSMUST00000125257 2079 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
Trav16A0A075B653 Xk-201ENSMUST00000015486 5076 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
Trav16A0A075B653 Phf14-201ENSMUST00000090632 3985 ntTSL 1 (best) BASIC16.02■□□□□ 0.15
Trav16A0A075B653 Mafg-201ENSMUST00000058162 4923 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
Trav16A0A075B653 Peli2-201ENSMUST00000073150 5900 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Trav16A0A075B653 Dgat1-201ENSMUST00000023214 1888 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Trav16A0A075B653 Eif2b3-203ENSMUST00000106448 1555 ntAPPRIS P1 TSL 5 BASIC16.01■□□□□ 0.15
Trav16A0A075B653 Rhoq-201ENSMUST00000024956 4151 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Trav16A0A075B653 AY074887-201ENSMUST00000054018 769 ntAPPRIS P1 BASIC16.01■□□□□ 0.15
Trav16A0A075B653 Gpr25-201ENSMUST00000086395 1077 ntAPPRIS P1 BASIC16.01■□□□□ 0.15
Trav16A0A075B653 Irx2-201ENSMUST00000074372 2625 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Trav16A0A075B653 Gm10125-205ENSMUST00000161921 1463 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
Trav16A0A075B653 Lgr4-201ENSMUST00000046548 5060 ntAPPRIS P1 TSL 2 BASIC16.01■□□□□ 0.15
Trav16A0A075B653 Kdm3b-204ENSMUST00000224715 2032 ntBASIC16.01■□□□□ 0.15
Trav16A0A075B653 Ppa2-203ENSMUST00000122334 1368 ntAPPRIS ALT2 TSL 1 (best) BASIC16■□□□□ 0.15
Trav16A0A075B653 Golph3-202ENSMUST00000226517 2359 ntBASIC16■□□□□ 0.15
Trav16A0A075B653 Ncoa5-202ENSMUST00000121377 2930 ntTSL 1 (best) BASIC16■□□□□ 0.15
Trav16A0A075B653 Zfp777-202ENSMUST00000114583 3111 ntAPPRIS P3 TSL 5 BASIC16■□□□□ 0.15
Trav16A0A075B653 Gm11599-201ENSMUST00000118720 878 ntBASIC16■□□□□ 0.15
Trav16A0A075B653 Gm44428-201ENSMUST00000204474 874 ntBASIC16■□□□□ 0.15
Trav16A0A075B653 Qsox2-201ENSMUST00000036187 2559 ntAPPRIS P1 TSL 5 BASIC16■□□□□ 0.15
Trav16A0A075B653 Bfsp1-202ENSMUST00000099296 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC16■□□□□ 0.15
Trav16A0A075B653 Foxj2-201ENSMUST00000003238 5283 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Trav16A0A075B653 Cers5-201ENSMUST00000023762 2096 ntAPPRIS P2 TSL 1 (best) BASIC15.99■□□□□ 0.15
Trav16A0A075B653 Otud3-201ENSMUST00000097830 1668 ntAPPRIS P1 TSL 2 BASIC15.99■□□□□ 0.15
Trav16A0A075B653 Psmb8-201ENSMUST00000025196 1628 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
Trav16A0A075B653 Oser1-201ENSMUST00000046908 1620 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
Trav16A0A075B653 Siglecf-206ENSMUST00000206299 2149 ntAPPRIS ALT2 TSL 1 (best) BASIC15.99■□□□□ 0.15
Trav16A0A075B653 A530095I07Rik-201ENSMUST00000070942 847 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
Trav16A0A075B653 Prrx2-201ENSMUST00000041659 1441 ntAPPRIS P2 TSL 1 (best) BASIC15.99■□□□□ 0.15
Trav16A0A075B653 Crtc2-201ENSMUST00000029545 2747 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
Trav16A0A075B653 Purb-201ENSMUST00000179343 8319 ntAPPRIS P1 BASIC15.99■□□□□ 0.15
Trav16A0A075B653 Amn-201ENSMUST00000021707 1701 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
Trav16A0A075B653 Gm8093-201ENSMUST00000128935 1892 ntBASIC15.99■□□□□ 0.15
Trav16A0A075B653 Pde7a-202ENSMUST00000099195 6298 ntAPPRIS ALT1 TSL 1 (best) BASIC15.99■□□□□ 0.15
Trav16A0A075B653 Slc35d3-201ENSMUST00000059805 2630 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
Trav16A0A075B653 Upf1-201ENSMUST00000075666 4618 ntAPPRIS P2 TSL 1 (best) BASIC15.98■□□□□ 0.15
Trav16A0A075B653 Nexmif-201ENSMUST00000056502 5211 ntAPPRIS ALT2 TSL 1 (best) BASIC15.98■□□□□ 0.15
Trav16A0A075B653 Fgfrl1-201ENSMUST00000013633 2329 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
Trav16A0A075B653 1700084E18Rik-202ENSMUST00000205624 729 ntBASIC15.98■□□□□ 0.15
Trav16A0A075B653 Naa20-201ENSMUST00000002805 1172 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
Trav16A0A075B653 Fastk-201ENSMUST00000030800 1893 ntAPPRIS P2 TSL 1 (best) BASIC15.98■□□□□ 0.15
Trav16A0A075B653 Runx2os1-201ENSMUST00000097320 792 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
Trav16A0A075B653 Alg9-201ENSMUST00000034561 2873 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
Retrieved 100 of 76,532 protein–RNA pairs in 15.5 ms