Protein–RNA interactions for Protein: A0A075B650

Trav15-2-dv6-2, T cell receptor alpha variable 15-2-DV6-2 (Fragment), mousemouse

Predictions only

Length 123 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav15-2-dv6-2A0A075B650 Pgam1-201ENSMUST00000011896 1831 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Trav15-2-dv6-2A0A075B650 Dmrta2-201ENSMUST00000061187 2922 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Trav15-2-dv6-2A0A075B650 Gm10125-201ENSMUST00000074702 2286 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
Trav15-2-dv6-2A0A075B650 Zbtb4-203ENSMUST00000108640 4067 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Trav15-2-dv6-2A0A075B650 Barhl1-203ENSMUST00000113849 2102 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Trav15-2-dv6-2A0A075B650 Lgr4-202ENSMUST00000111037 4988 ntTSL 5 BASIC17.06■□□□□ 0.32
Trav15-2-dv6-2A0A075B650 Ctsz-201ENSMUST00000016400 1441 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Trav15-2-dv6-2A0A075B650 Oaf-201ENSMUST00000034512 2526 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Trav15-2-dv6-2A0A075B650 Thap8-202ENSMUST00000108187 1184 ntAPPRIS P5 TSL 2 BASIC17.06■□□□□ 0.32
Trav15-2-dv6-2A0A075B650 Znrf1-207ENSMUST00000173506 1238 ntAPPRIS P1 TSL 2 BASIC17.06■□□□□ 0.32
Trav15-2-dv6-2A0A075B650 Gsr-201ENSMUST00000033992 2673 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Trav15-2-dv6-2A0A075B650 Socs2-213ENSMUST00000170690 2195 ntAPPRIS P1 TSL 3 BASIC17.06■□□□□ 0.32
Trav15-2-dv6-2A0A075B650 Psme4-201ENSMUST00000041231 6491 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Trav15-2-dv6-2A0A075B650 Tmem230-202ENSMUST00000110163 1551 ntAPPRIS P1 TSL 3 BASIC17.06■□□□□ 0.32
Trav15-2-dv6-2A0A075B650 Ppcs-201ENSMUST00000030385 1443 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Trav15-2-dv6-2A0A075B650 Gm13594-201ENSMUST00000137582 476 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
Trav15-2-dv6-2A0A075B650 Crct1-201ENSMUST00000029521 718 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Trav15-2-dv6-2A0A075B650 Spata2-202ENSMUST00000109211 1531 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
Trav15-2-dv6-2A0A075B650 Ntn5-203ENSMUST00000183120 1491 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
Trav15-2-dv6-2A0A075B650 Gm44949-201ENSMUST00000206423 1450 ntBASIC17.05■□□□□ 0.32
Trav15-2-dv6-2A0A075B650 Lzts2-202ENSMUST00000178087 2773 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Trav15-2-dv6-2A0A075B650 Gm16286-205ENSMUST00000127234 1755 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Trav15-2-dv6-2A0A075B650 Lsm14a-201ENSMUST00000085585 2944 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Trav15-2-dv6-2A0A075B650 Cnrip1-201ENSMUST00000058159 1654 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Trav15-2-dv6-2A0A075B650 Kmt2b-202ENSMUST00000108154 8454 ntAPPRIS P2 TSL 1 (best) BASIC17.04■□□□□ 0.32
Trav15-2-dv6-2A0A075B650 Mrpl48-207ENSMUST00000146003 1625 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
Trav15-2-dv6-2A0A075B650 Kif27-203ENSMUST00000225388 5121 ntAPPRIS P1 BASIC17.04■□□□□ 0.32
Trav15-2-dv6-2A0A075B650 Rell2-210ENSMUST00000176104 2150 ntAPPRIS P1 TSL 5 BASIC17.04■□□□□ 0.32
Trav15-2-dv6-2A0A075B650 E130218I03Rik-204ENSMUST00000131447 888 ntAPPRIS P1 TSL 5 BASIC17.04■□□□□ 0.32
Trav15-2-dv6-2A0A075B650 Chtf8-205ENSMUST00000176515 694 ntTSL 2 BASIC17.04■□□□□ 0.32
Trav15-2-dv6-2A0A075B650 Pcbd2-201ENSMUST00000021958 544 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
Trav15-2-dv6-2A0A075B650 Clpp-201ENSMUST00000002735 1207 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Trav15-2-dv6-2A0A075B650 Doc2a-201ENSMUST00000064110 2538 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Trav15-2-dv6-2A0A075B650 Slc9a2-201ENSMUST00000027231 5019 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Trav15-2-dv6-2A0A075B650 Snhg20-203ENSMUST00000182811 2153 ntBASIC17.04■□□□□ 0.32
Trav15-2-dv6-2A0A075B650 Ipmk-201ENSMUST00000079252 5447 ntAPPRIS P3 TSL 1 (best) BASIC17.03■□□□□ 0.32
Trav15-2-dv6-2A0A075B650 Lgi2-202ENSMUST00000199942 6273 ntAPPRIS ALT2 TSL 1 (best) BASIC17.03■□□□□ 0.32
Trav15-2-dv6-2A0A075B650 Hras-201ENSMUST00000026572 2828 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Trav15-2-dv6-2A0A075B650 Sft2d3-201ENSMUST00000054984 2810 ntAPPRIS P1 BASIC17.03■□□□□ 0.32
Trav15-2-dv6-2A0A075B650 Aurkb-202ENSMUST00000108666 1831 ntAPPRIS P1 TSL 5 BASIC17.03■□□□□ 0.32
Trav15-2-dv6-2A0A075B650 Lyar-201ENSMUST00000087514 1563 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Trav15-2-dv6-2A0A075B650 Mad2l2-202ENSMUST00000084129 1162 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Trav15-2-dv6-2A0A075B650 Shox2-201ENSMUST00000029422 3079 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Trav15-2-dv6-2A0A075B650 Cdk13-201ENSMUST00000042365 5202 ntAPPRIS P2 TSL 1 (best) BASIC17.03■□□□□ 0.32
Trav15-2-dv6-2A0A075B650 Hccs-202ENSMUST00000112115 2473 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Trav15-2-dv6-2A0A075B650 Ube2d2a-202ENSMUST00000170693 2483 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Trav15-2-dv6-2A0A075B650 Trim47-201ENSMUST00000021120 2204 ntAPPRIS P4 TSL 1 (best) BASIC17.02■□□□□ 0.32
Trav15-2-dv6-2A0A075B650 Mapk11-201ENSMUST00000088823 2440 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Trav15-2-dv6-2A0A075B650 Nars2-202ENSMUST00000107159 1777 ntTSL 5 BASIC17.02■□□□□ 0.32
Trav15-2-dv6-2A0A075B650 Tead4-202ENSMUST00000112157 1909 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
Trav15-2-dv6-2A0A075B650 Atg3-201ENSMUST00000023343 2057 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Trav15-2-dv6-2A0A075B650 Paqr6-203ENSMUST00000147948 837 ntTSL 2 BASIC17.02■□□□□ 0.32
Trav15-2-dv6-2A0A075B650 Scarna2-201ENSMUST00000157560 414 ntBASIC17.02■□□□□ 0.32
Trav15-2-dv6-2A0A075B650 Gm16437-201ENSMUST00000025669 507 ntBASIC17.02■□□□□ 0.32
Trav15-2-dv6-2A0A075B650 Foxd1-201ENSMUST00000105098 5064 ntAPPRIS P1 BASIC17.02■□□□□ 0.31
Trav15-2-dv6-2A0A075B650 9230116N13Rik-201ENSMUST00000181746 2097 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
Trav15-2-dv6-2A0A075B650 Stradb-202ENSMUST00000114296 1348 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
Trav15-2-dv6-2A0A075B650 Gm9817-201ENSMUST00000054395 2531 ntAPPRIS P1 BASIC17.01■□□□□ 0.31
Trav15-2-dv6-2A0A075B650 Nkpd1-203ENSMUST00000214205 2309 ntAPPRIS ALT2 TSL 5 BASIC17.01■□□□□ 0.31
Trav15-2-dv6-2A0A075B650 Sike1-202ENSMUST00000119450 774 ntTSL 3 BASIC17.01■□□□□ 0.31
Trav15-2-dv6-2A0A075B650 Gm13256-201ENSMUST00000131297 520 ntTSL 3 BASIC17.01■□□□□ 0.31
Trav15-2-dv6-2A0A075B650 AC151971.4-201ENSMUST00000214717 704 ntBASIC17.01■□□□□ 0.31
Trav15-2-dv6-2A0A075B650 Gm9806-201ENSMUST00000051080 552 ntBASIC17.01■□□□□ 0.31
Trav15-2-dv6-2A0A075B650 Nrxn2-208ENSMUST00000137166 6314 ntAPPRIS ALT2 TSL 5 BASIC17.01■□□□□ 0.31
Trav15-2-dv6-2A0A075B650 Fndc5-201ENSMUST00000102600 2763 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Trav15-2-dv6-2A0A075B650 Stmn4-204ENSMUST00000121955 1361 ntTSL 5 BASIC17.01■□□□□ 0.31
Trav15-2-dv6-2A0A075B650 Bola3-207ENSMUST00000136501 2312 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Trav15-2-dv6-2A0A075B650 Oaz2-201ENSMUST00000046490 1840 ntAPPRIS ALT1 TSL 5 BASIC17■□□□□ 0.31
Trav15-2-dv6-2A0A075B650 Stbd1-201ENSMUST00000050952 1985 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Trav15-2-dv6-2A0A075B650 Ntf5-201ENSMUST00000058879 1963 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Trav15-2-dv6-2A0A075B650 Slc39a7-203ENSMUST00000169397 2107 ntAPPRIS P1 TSL 5 BASIC17■□□□□ 0.31
Trav15-2-dv6-2A0A075B650 Crtc2-201ENSMUST00000029545 2747 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Trav15-2-dv6-2A0A075B650 Mgat5b-201ENSMUST00000103027 4258 ntAPPRIS P1 TSL 5 BASIC17■□□□□ 0.31
Trav15-2-dv6-2A0A075B650 Selenoo-201ENSMUST00000082439 2383 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Trav15-2-dv6-2A0A075B650 Uap1-201ENSMUST00000027981 2283 ntAPPRIS P3 TSL 1 (best) BASIC17■□□□□ 0.31
Trav15-2-dv6-2A0A075B650 Kifc3-201ENSMUST00000034240 3277 ntAPPRIS P4 TSL 1 (best) BASIC17■□□□□ 0.31
Trav15-2-dv6-2A0A075B650 Eva1b-203ENSMUST00000106152 1364 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Trav15-2-dv6-2A0A075B650 Ets1-202ENSMUST00000050797 1976 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
Trav15-2-dv6-2A0A075B650 8430422M14Rik-201ENSMUST00000199608 822 ntBASIC16.99■□□□□ 0.31
Trav15-2-dv6-2A0A075B650 Pigv-202ENSMUST00000067902 990 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
Trav15-2-dv6-2A0A075B650 Dedd2-202ENSMUST00000205271 1942 ntAPPRIS P1 TSL 5 BASIC16.99■□□□□ 0.31
Trav15-2-dv6-2A0A075B650 Fance-202ENSMUST00000114801 1751 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
Trav15-2-dv6-2A0A075B650 Pmpca-202ENSMUST00000114093 1638 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
Trav15-2-dv6-2A0A075B650 Rhoq-201ENSMUST00000024956 4151 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Trav15-2-dv6-2A0A075B650 Cdkl3-210ENSMUST00000121591 2387 ntAPPRIS ALT2 TSL 1 (best) BASIC16.99■□□□□ 0.31
Trav15-2-dv6-2A0A075B650 Hfe2-201ENSMUST00000049208 2028 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Trav15-2-dv6-2A0A075B650 Mad2l2-201ENSMUST00000030860 1535 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Trav15-2-dv6-2A0A075B650 Gm15334-201ENSMUST00000131421 325 ntTSL 3 BASIC16.98■□□□□ 0.31
Trav15-2-dv6-2A0A075B650 Stbd1-202ENSMUST00000200941 523 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
Trav15-2-dv6-2A0A075B650 Cox11-201ENSMUST00000020851 1224 ntAPPRIS P2 TSL 1 (best) BASIC16.98■□□□□ 0.31
Trav15-2-dv6-2A0A075B650 Lsm4-205ENSMUST00000210987 636 ntTSL 5 BASIC16.98■□□□□ 0.31
Trav15-2-dv6-2A0A075B650 Man1a-203ENSMUST00000105470 2847 ntAPPRIS P1 TSL 5 BASIC16.98■□□□□ 0.31
Trav15-2-dv6-2A0A075B650 Hmox2-202ENSMUST00000118885 1392 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Trav15-2-dv6-2A0A075B650 Ccr10-201ENSMUST00000062759 1726 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Trav15-2-dv6-2A0A075B650 Akt1-201ENSMUST00000001780 2690 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Trav15-2-dv6-2A0A075B650 Cops7a-201ENSMUST00000032220 1817 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Trav15-2-dv6-2A0A075B650 4430402I18Rik-201ENSMUST00000025872 2152 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
Trav15-2-dv6-2A0A075B650 Gm26660-201ENSMUST00000181582 2543 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
Trav15-2-dv6-2A0A075B650 Grsf1-201ENSMUST00000078945 2538 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Trav15-2-dv6-2A0A075B650 Cacna2d2-201ENSMUST00000010210 5783 ntAPPRIS ALT2 TSL 1 (best) BASIC16.98■□□□□ 0.31
Retrieved 100 of 76,532 protein–RNA pairs in 16.9 ms