Protein–RNA interactions for Protein: A0A075B639

Trav6-7-dv9, T cell receptor alpha variable 6-7-DV9 (Fragment), mousemouse

Predictions only

Length 125 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav6-7-dv9A0A075B639 Gm28536-201ENSMUST00000190971 1317 ntBASIC18.56■□□□□ 0.56
Trav6-7-dv9A0A075B639 AC158990.1-201ENSMUST00000221450 2016 ntBASIC18.56■□□□□ 0.56
Trav6-7-dv9A0A075B639 Snx21-203ENSMUST00000152471 1243 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
Trav6-7-dv9A0A075B639 Emc8-208ENSMUST00000181950 747 ntTSL 2 BASIC18.56■□□□□ 0.56
Trav6-7-dv9A0A075B639 Tmem160-201ENSMUST00000019302 815 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Trav6-7-dv9A0A075B639 Zdhhc5-201ENSMUST00000035840 4706 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Trav6-7-dv9A0A075B639 Epb41l4b-201ENSMUST00000030142 3247 ntAPPRIS P2 TSL 1 (best) BASIC18.56■□□□□ 0.56
Trav6-7-dv9A0A075B639 Krt8-201ENSMUST00000023952 1805 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Trav6-7-dv9A0A075B639 Nkx2-5-201ENSMUST00000015723 1525 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Trav6-7-dv9A0A075B639 Puf60-202ENSMUST00000100527 1878 ntAPPRIS P4 TSL 1 (best) BASIC18.55■□□□□ 0.56
Trav6-7-dv9A0A075B639 Gm2415-201ENSMUST00000128982 1474 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
Trav6-7-dv9A0A075B639 Mtm1-204ENSMUST00000101501 770 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
Trav6-7-dv9A0A075B639 Gm7544-201ENSMUST00000222426 828 ntAPPRIS P1 BASIC18.55■□□□□ 0.56
Trav6-7-dv9A0A075B639 Igfbp7-201ENSMUST00000046746 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC18.55■□□□□ 0.56
Trav6-7-dv9A0A075B639 Usp39-201ENSMUST00000070345 2244 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Trav6-7-dv9A0A075B639 1700026D11Rik-201ENSMUST00000126910 2033 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
Trav6-7-dv9A0A075B639 Cdx1-201ENSMUST00000025521 1750 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Trav6-7-dv9A0A075B639 Tmub1-202ENSMUST00000115033 1598 ntAPPRIS P1 TSL 5 BASIC18.55■□□□□ 0.56
Trav6-7-dv9A0A075B639 Eif5a-208ENSMUST00000108611 1353 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Trav6-7-dv9A0A075B639 Snapin-203ENSMUST00000149884 1928 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Trav6-7-dv9A0A075B639 Ntsr2-201ENSMUST00000111064 1524 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Trav6-7-dv9A0A075B639 Prdm11-205ENSMUST00000178666 1870 ntTSL 5 BASIC18.54■□□□□ 0.56
Trav6-7-dv9A0A075B639 Pgam1-201ENSMUST00000011896 1831 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Trav6-7-dv9A0A075B639 Abhd12-201ENSMUST00000056149 1999 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Trav6-7-dv9A0A075B639 Wipi1-203ENSMUST00000106689 1220 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
Trav6-7-dv9A0A075B639 Kcnmb4os2-203ENSMUST00000127070 1048 ntTSL 2 BASIC18.54■□□□□ 0.56
Trav6-7-dv9A0A075B639 Hoxd11-202ENSMUST00000142312 1111 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Trav6-7-dv9A0A075B639 Tmem192-203ENSMUST00000209852 1193 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
Trav6-7-dv9A0A075B639 Jtb-201ENSMUST00000029546 1101 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Trav6-7-dv9A0A075B639 Pgls-201ENSMUST00000034264 893 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Trav6-7-dv9A0A075B639 Osbp-201ENSMUST00000025590 4578 ntAPPRIS P1 TSL 5 BASIC18.54■□□□□ 0.56
Trav6-7-dv9A0A075B639 Gabbr1-209ENSMUST00000174456 1595 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
Trav6-7-dv9A0A075B639 Rsrc1-202ENSMUST00000065047 2736 ntAPPRIS ALT2 TSL 1 (best) BASIC18.54■□□□□ 0.56
Trav6-7-dv9A0A075B639 Hs2st1-201ENSMUST00000043325 6177 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Trav6-7-dv9A0A075B639 Whrn-208ENSMUST00000119294 2632 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
Trav6-7-dv9A0A075B639 Lgi2-202ENSMUST00000199942 6273 ntAPPRIS ALT2 TSL 1 (best) BASIC18.53■□□□□ 0.56
Trav6-7-dv9A0A075B639 Cers5-201ENSMUST00000023762 2096 ntAPPRIS P2 TSL 1 (best) BASIC18.53■□□□□ 0.56
Trav6-7-dv9A0A075B639 Rbfox3-206ENSMUST00000120061 2150 ntAPPRIS ALT2 TSL 5 BASIC18.53■□□□□ 0.56
Trav6-7-dv9A0A075B639 Zfp346-203ENSMUST00000159278 1253 ntAPPRIS ALT2 TSL 5 BASIC18.53■□□□□ 0.56
Trav6-7-dv9A0A075B639 Nsd1-203ENSMUST00000224156 1149 ntBASIC18.53■□□□□ 0.56
Trav6-7-dv9A0A075B639 Tm2d2-201ENSMUST00000033961 1281 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Trav6-7-dv9A0A075B639 Nfkbil1-201ENSMUST00000048994 1447 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Trav6-7-dv9A0A075B639 Ell3-201ENSMUST00000028679 2115 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Trav6-7-dv9A0A075B639 Chsy1-201ENSMUST00000036372 4176 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Trav6-7-dv9A0A075B639 Gm43006-201ENSMUST00000197702 1602 ntBASIC18.52■□□□□ 0.56
Trav6-7-dv9A0A075B639 Gm44949-201ENSMUST00000206423 1450 ntBASIC18.52■□□□□ 0.56
Trav6-7-dv9A0A075B639 C1qtnf5-203ENSMUST00000114818 1337 ntAPPRIS P1 TSL 5 BASIC18.52■□□□□ 0.56
Trav6-7-dv9A0A075B639 Sin3b-202ENSMUST00000109950 1024 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
Trav6-7-dv9A0A075B639 8430422M14Rik-201ENSMUST00000199608 822 ntBASIC18.52■□□□□ 0.56
Trav6-7-dv9A0A075B639 Bsg-201ENSMUST00000067036 1526 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Trav6-7-dv9A0A075B639 Gm5913-201ENSMUST00000119397 1399 ntBASIC18.52■□□□□ 0.55
Trav6-7-dv9A0A075B639 Neo1-202ENSMUST00000214547 5414 ntAPPRIS ALT2 TSL 1 (best) BASIC18.52■□□□□ 0.55
Trav6-7-dv9A0A075B639 Hcn4-201ENSMUST00000034889 6118 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Trav6-7-dv9A0A075B639 Zfand2b-201ENSMUST00000027394 1316 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Trav6-7-dv9A0A075B639 Rtca-201ENSMUST00000000348 1594 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Trav6-7-dv9A0A075B639 Rhob-201ENSMUST00000067384 2349 ntAPPRIS P1 BASIC18.51■□□□□ 0.55
Trav6-7-dv9A0A075B639 Tmem74b-201ENSMUST00000060196 1435 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Trav6-7-dv9A0A075B639 Fam89b-203ENSMUST00000161368 1160 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
Trav6-7-dv9A0A075B639 Gm45371-201ENSMUST00000210723 459 ntTSL 3 BASIC18.51■□□□□ 0.55
Trav6-7-dv9A0A075B639 Gm45444-201ENSMUST00000211394 898 ntBASIC18.51■□□□□ 0.55
Trav6-7-dv9A0A075B639 Homer1-207ENSMUST00000109494 2468 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
Trav6-7-dv9A0A075B639 Btbd17-201ENSMUST00000000206 1717 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Trav6-7-dv9A0A075B639 Rapgefl1-202ENSMUST00000107479 4855 ntAPPRIS P1 TSL 5 BASIC18.51■□□□□ 0.55
Trav6-7-dv9A0A075B639 Tcerg1l-201ENSMUST00000160436 2565 ntAPPRIS P1 TSL 5 BASIC18.5■□□□□ 0.55
Trav6-7-dv9A0A075B639 Tpm1-211ENSMUST00000113695 1607 ntTSL 3 BASIC18.5■□□□□ 0.55
Trav6-7-dv9A0A075B639 Vax1-201ENSMUST00000172821 1044 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Trav6-7-dv9A0A075B639 Gm28040-202ENSMUST00000184603 890 ntAPPRIS P1 TSL 2 BASIC18.5■□□□□ 0.55
Trav6-7-dv9A0A075B639 Ccdc61-201ENSMUST00000098780 2022 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Trav6-7-dv9A0A075B639 A230052G05Rik-201ENSMUST00000050921 2302 ntBASIC18.5■□□□□ 0.55
Trav6-7-dv9A0A075B639 Cenpb-201ENSMUST00000089510 4886 ntAPPRIS P1 BASIC18.5■□□□□ 0.55
Trav6-7-dv9A0A075B639 Tmem164-206ENSMUST00000112896 5224 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Trav6-7-dv9A0A075B639 Tmx4-202ENSMUST00000110119 596 ntTSL 2 BASIC18.49■□□□□ 0.55
Trav6-7-dv9A0A075B639 Btbd6-206ENSMUST00000222209 644 ntTSL 3 BASIC18.49■□□□□ 0.55
Trav6-7-dv9A0A075B639 AC166358.2-201ENSMUST00000223403 734 ntTSL 5 BASIC18.49■□□□□ 0.55
Trav6-7-dv9A0A075B639 Rab24-201ENSMUST00000035242 1168 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Trav6-7-dv9A0A075B639 Ptpn12-201ENSMUST00000030556 3280 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Trav6-7-dv9A0A075B639 Zfp36l1-202ENSMUST00000165114 1934 ntAPPRIS P1 TSL 5 BASIC18.48■□□□□ 0.55
Trav6-7-dv9A0A075B639 Galr2-201ENSMUST00000055872 1940 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Trav6-7-dv9A0A075B639 D1Ertd622e-203ENSMUST00000149927 2703 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Trav6-7-dv9A0A075B639 Gm8093-201ENSMUST00000128935 1892 ntBASIC18.48■□□□□ 0.55
Trav6-7-dv9A0A075B639 Slc35a2-201ENSMUST00000096514 1757 ntTSL 5 BASIC18.47■□□□□ 0.55
Trav6-7-dv9A0A075B639 Plk5-201ENSMUST00000039836 2112 ntAPPRIS P3 TSL 2 BASIC18.47■□□□□ 0.55
Trav6-7-dv9A0A075B639 Slc27a3-201ENSMUST00000029541 2259 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Trav6-7-dv9A0A075B639 Dexi-201ENSMUST00000038281 1389 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Trav6-7-dv9A0A075B639 E130208F15Rik-201ENSMUST00000098585 1733 ntAPPRIS P1 BASIC18.47■□□□□ 0.55
Trav6-7-dv9A0A075B639 Rab42-201ENSMUST00000040411 761 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Trav6-7-dv9A0A075B639 Dvl3-201ENSMUST00000003318 2498 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Trav6-7-dv9A0A075B639 Txnl4a-204ENSMUST00000145963 1756 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Trav6-7-dv9A0A075B639 Tusc2-201ENSMUST00000010198 1665 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Trav6-7-dv9A0A075B639 Gm6277-202ENSMUST00000224036 2779 ntBASIC18.47■□□□□ 0.55
Trav6-7-dv9A0A075B639 Shisa8-201ENSMUST00000179269 1804 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Trav6-7-dv9A0A075B639 Cops7a-201ENSMUST00000032220 1817 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Trav6-7-dv9A0A075B639 Setd6-201ENSMUST00000034096 1707 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Trav6-7-dv9A0A075B639 Tex30-208ENSMUST00000147571 1360 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Trav6-7-dv9A0A075B639 1700001C19Rik-201ENSMUST00000061885 1622 ntAPPRIS P3 TSL 1 (best) BASIC18.46■□□□□ 0.55
Trav6-7-dv9A0A075B639 Gm16286-205ENSMUST00000127234 1755 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Trav6-7-dv9A0A075B639 Rin3-207ENSMUST00000150795 937 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
Trav6-7-dv9A0A075B639 Neurl1b-202ENSMUST00000182897 1231 ntTSL 5 BASIC18.46■□□□□ 0.55
Trav6-7-dv9A0A075B639 9130213A22Rik-201ENSMUST00000180487 1581 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Trav6-7-dv9A0A075B639 Tab2-204ENSMUST00000146444 4380 ntAPPRIS P1 TSL 5 BASIC18.45■□□□□ 0.54
Retrieved 100 of 76,532 protein–RNA pairs in 20.5 ms