Protein–RNA interactions for Protein: A0A075B603

Trav6-6, T cell receptor alpha variable 6-6 (Fragment), mousemouse

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav6-6A0A075B603 Id3-201ENSMUST00000008016 1278 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Trav6-6A0A075B603 Lrrc10b-201ENSMUST00000171400 2077 ntAPPRIS P1 BASIC15.48■□□□□ 0.07
Trav6-6A0A075B603 Ankrd54-201ENSMUST00000040676 1904 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
Trav6-6A0A075B603 Rapgefl1-202ENSMUST00000107479 4855 ntAPPRIS P1 TSL 5 BASIC15.47■□□□□ 0.07
Trav6-6A0A075B603 Arhgap23-202ENSMUST00000107601 5450 ntTSL 5 BASIC15.47■□□□□ 0.07
Trav6-6A0A075B603 Bmp2k-202ENSMUST00000112974 3244 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
Trav6-6A0A075B603 Tmbim4-204ENSMUST00000134797 486 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
Trav6-6A0A075B603 Rpl31-203ENSMUST00000179954 630 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
Trav6-6A0A075B603 Psmg1-201ENSMUST00000023630 1044 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
Trav6-6A0A075B603 Patz1-203ENSMUST00000094471 2930 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
Trav6-6A0A075B603 Ttc14-206ENSMUST00000196975 1711 ntAPPRIS ALT2 TSL 1 (best) BASIC15.46■□□□□ 0.07
Trav6-6A0A075B603 Siah2-201ENSMUST00000070368 2511 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
Trav6-6A0A075B603 Gprc5b-204ENSMUST00000208394 1416 ntAPPRIS ALT2 TSL 1 (best) BASIC15.46■□□□□ 0.07
Trav6-6A0A075B603 Paqr6-203ENSMUST00000147948 837 ntTSL 2 BASIC15.46■□□□□ 0.07
Trav6-6A0A075B603 Gm9806-201ENSMUST00000051080 552 ntBASIC15.46■□□□□ 0.07
Trav6-6A0A075B603 Sox12-202ENSMUST00000182625 4453 ntAPPRIS P1 BASIC15.46■□□□□ 0.07
Trav6-6A0A075B603 Map3k21-201ENSMUST00000034316 5693 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
Trav6-6A0A075B603 Tifa-202ENSMUST00000163775 1646 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.06
Trav6-6A0A075B603 Gjc2-201ENSMUST00000108790 2169 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Trav6-6A0A075B603 Gjc2-202ENSMUST00000108793 2187 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Trav6-6A0A075B603 Ispd-204ENSMUST00000221452 1924 ntAPPRIS ALT2 TSL 1 (best) BASIC15.45■□□□□ 0.06
Trav6-6A0A075B603 Cars2-201ENSMUST00000049461 1902 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Trav6-6A0A075B603 Zfp777-202ENSMUST00000114583 3111 ntAPPRIS P3 TSL 5 BASIC15.45■□□□□ 0.06
Trav6-6A0A075B603 E130218I03Rik-204ENSMUST00000131447 888 ntAPPRIS P1 TSL 5 BASIC15.45■□□□□ 0.06
Trav6-6A0A075B603 Gls2-201ENSMUST00000044776 2573 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Trav6-6A0A075B603 Gm20458-201ENSMUST00000164863 1369 ntAPPRIS P1 TSL 5 BASIC15.45■□□□□ 0.06
Trav6-6A0A075B603 Msc-201ENSMUST00000027062 1741 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Trav6-6A0A075B603 Tead4-202ENSMUST00000112157 1909 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
Trav6-6A0A075B603 E530011L22Rik-202ENSMUST00000216791 2007 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
Trav6-6A0A075B603 Gorasp2-201ENSMUST00000028509 2238 ntAPPRIS P2 TSL 1 (best) BASIC15.44■□□□□ 0.06
Trav6-6A0A075B603 Tbc1d25-204ENSMUST00000172020 2441 ntAPPRIS ALT2 TSL 1 (best) BASIC15.44■□□□□ 0.06
Trav6-6A0A075B603 Kalrn-208ENSMUST00000114961 6128 ntTSL 5 BASIC15.44■□□□□ 0.06
Trav6-6A0A075B603 Lypla2-201ENSMUST00000067567 1626 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
Trav6-6A0A075B603 Bfsp1-202ENSMUST00000099296 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC15.44■□□□□ 0.06
Trav6-6A0A075B603 Scarna2-201ENSMUST00000157560 414 ntBASIC15.44■□□□□ 0.06
Trav6-6A0A075B603 Gm39157-201ENSMUST00000212322 1180 ntTSL 5 BASIC15.44■□□□□ 0.06
Trav6-6A0A075B603 Ppa2-203ENSMUST00000122334 1368 ntAPPRIS ALT2 TSL 1 (best) BASIC15.44■□□□□ 0.06
Trav6-6A0A075B603 Lsr-205ENSMUST00000205961 2021 ntAPPRIS P3 TSL 1 (best) BASIC15.44■□□□□ 0.06
Trav6-6A0A075B603 B430319F04Rik-201ENSMUST00000209731 2669 ntBASIC15.44■□□□□ 0.06
Trav6-6A0A075B603 Nkx2-2-201ENSMUST00000067075 2120 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
Trav6-6A0A075B603 En2-201ENSMUST00000036177 3539 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
Trav6-6A0A075B603 Pou3f1-201ENSMUST00000053491 3849 ntAPPRIS P1 BASIC15.44■□□□□ 0.06
Trav6-6A0A075B603 Puf60-202ENSMUST00000100527 1878 ntAPPRIS P4 TSL 1 (best) BASIC15.44■□□□□ 0.06
Trav6-6A0A075B603 Srsf2-206ENSMUST00000190993 1326 ntAPPRIS P1 TSL 2 BASIC15.43■□□□□ 0.06
Trav6-6A0A075B603 Fam83d-201ENSMUST00000029183 2266 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Trav6-6A0A075B603 Parp12-201ENSMUST00000038398 3231 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Trav6-6A0A075B603 Gm10837-201ENSMUST00000100294 1536 ntAPPRIS P1 BASIC15.43■□□□□ 0.06
Trav6-6A0A075B603 Ccdc61-201ENSMUST00000098780 2022 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Trav6-6A0A075B603 Nr2f1-201ENSMUST00000091458 3207 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Trav6-6A0A075B603 Slc16a10-201ENSMUST00000092566 5397 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Trav6-6A0A075B603 Cyp2r1-202ENSMUST00000119712 917 ntTSL 5 BASIC15.43■□□□□ 0.06
Trav6-6A0A075B603 Slc35a2-211ENSMUST00000208640 486 ntTSL 5 BASIC15.43■□□□□ 0.06
Trav6-6A0A075B603 Apaf1-205ENSMUST00000160788 1596 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
Trav6-6A0A075B603 Magi3-201ENSMUST00000064371 6640 ntAPPRIS P3 TSL 1 (best) BASIC15.43■□□□□ 0.06
Trav6-6A0A075B603 Anapc5-208ENSMUST00000197719 2383 ntAPPRIS ALT2 TSL 1 (best) BASIC15.43■□□□□ 0.06
Trav6-6A0A075B603 Pkm-201ENSMUST00000034834 2432 ntAPPRIS P3 TSL 1 (best) BASIC15.43■□□□□ 0.06
Trav6-6A0A075B603 AI846148-201ENSMUST00000025924 3183 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Trav6-6A0A075B603 Agfg1-202ENSMUST00000113444 3142 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
Trav6-6A0A075B603 Gm10125-205ENSMUST00000161921 1463 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
Trav6-6A0A075B603 Gm11687-201ENSMUST00000118911 886 ntBASIC15.42■□□□□ 0.06
Trav6-6A0A075B603 Gadd45a-201ENSMUST00000043098 1223 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Trav6-6A0A075B603 1110008P14Rik-201ENSMUST00000048792 680 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Trav6-6A0A075B603 Gm42418-201ENSMUST00000182010 1831 ntBASIC15.42■□□□□ 0.06
Trav6-6A0A075B603 Sirt1-207ENSMUST00000177694 3353 ntTSL 5 BASIC15.42■□□□□ 0.06
Trav6-6A0A075B603 Slc35f3-201ENSMUST00000108759 2309 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Trav6-6A0A075B603 Taf11-202ENSMUST00000114848 2207 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Trav6-6A0A075B603 Gm16286-201ENSMUST00000025463 1650 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Trav6-6A0A075B603 Otud3-201ENSMUST00000097830 1668 ntAPPRIS P1 TSL 2 BASIC15.41■□□□□ 0.06
Trav6-6A0A075B603 Hfe2-201ENSMUST00000049208 2028 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Trav6-6A0A075B603 Pou2f2-205ENSMUST00000108417 1937 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
Trav6-6A0A075B603 Usp2-206ENSMUST00000176416 1486 ntAPPRIS ALT2 TSL 1 (best) BASIC15.41■□□□□ 0.06
Trav6-6A0A075B603 Susd3-203ENSMUST00000119721 1249 ntAPPRIS ALT2 TSL 1 (best) BASIC15.41■□□□□ 0.06
Trav6-6A0A075B603 Asf1a-205ENSMUST00000219282 1150 ntTSL 5 BASIC15.41■□□□□ 0.06
Trav6-6A0A075B603 Gm16437-201ENSMUST00000025669 507 ntBASIC15.41■□□□□ 0.06
Trav6-6A0A075B603 Kansl1-204ENSMUST00000106972 5427 ntAPPRIS ALT2 TSL 5 BASIC15.41■□□□□ 0.06
Trav6-6A0A075B603 Ipmk-201ENSMUST00000079252 5447 ntAPPRIS P3 TSL 1 (best) BASIC15.41■□□□□ 0.06
Trav6-6A0A075B603 Slbp-201ENSMUST00000057551 1906 ntAPPRIS P3 TSL 1 (best) BASIC15.41■□□□□ 0.06
Trav6-6A0A075B603 Phf14-201ENSMUST00000090632 3985 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
Trav6-6A0A075B603 Cltb-202ENSMUST00000091609 2186 ntAPPRIS P3 TSL 1 (best) BASIC15.41■□□□□ 0.06
Trav6-6A0A075B603 Pawr-201ENSMUST00000095313 1745 ntAPPRIS P2 TSL 1 (best) BASIC15.4■□□□□ 0.06
Trav6-6A0A075B603 Igf2bp2-201ENSMUST00000100052 3899 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Trav6-6A0A075B603 Morf4l1-201ENSMUST00000085248 1882 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
Trav6-6A0A075B603 Hoxd3-201ENSMUST00000047830 2292 ntAPPRIS P1 TSL 5 BASIC15.4■□□□□ 0.06
Trav6-6A0A075B603 Nudt3-203ENSMUST00000114886 996 ntTSL 2 BASIC15.4■□□□□ 0.06
Trav6-6A0A075B603 Nectin1-201ENSMUST00000034510 5653 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Trav6-6A0A075B603 Rcor1-201ENSMUST00000084968 5684 ntAPPRIS ALT2 TSL 1 (best) BASIC15.39■□□□□ 0.05
Trav6-6A0A075B603 Hmox2-202ENSMUST00000118885 1392 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Trav6-6A0A075B603 Eif3j2-201ENSMUST00000057110 2379 ntAPPRIS P1 BASIC15.39■□□□□ 0.05
Trav6-6A0A075B603 Dnajc19-202ENSMUST00000108195 659 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Trav6-6A0A075B603 Smagp-202ENSMUST00000172334 952 ntAPPRIS P1 TSL 2 BASIC15.39■□□□□ 0.05
Trav6-6A0A075B603 B4galt1-202ENSMUST00000108096 1413 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
Trav6-6A0A075B603 Baiap2-205ENSMUST00000106233 2442 ntAPPRIS ALT2 TSL 5 BASIC15.39■□□□□ 0.05
Trav6-6A0A075B603 Ptpn18-201ENSMUST00000027302 1559 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Trav6-6A0A075B603 Tead1-204ENSMUST00000106638 3047 ntAPPRIS ALT1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Trav6-6A0A075B603 AC117245.4-201ENSMUST00000217388 1646 ntBASIC15.39■□□□□ 0.05
Trav6-6A0A075B603 Ccng2-201ENSMUST00000031331 2810 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Trav6-6A0A075B603 Cbfb-202ENSMUST00000109392 2891 ntAPPRIS ALT1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Trav6-6A0A075B603 Spsb3-204ENSMUST00000119829 1955 ntAPPRIS ALT2 TSL 2 BASIC15.38■□□□□ 0.05
Trav6-6A0A075B603 Rell2-211ENSMUST00000176902 1835 ntTSL 5 BASIC15.38■□□□□ 0.05
Trav6-6A0A075B603 Krt8-201ENSMUST00000023952 1805 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Retrieved 100 of 76,532 protein–RNA pairs in 14 ms