Protein–RNA interactions for Protein: Q9WUB7

Clcnka, Chloride channel protein ClC-Ka, mousemouse

Predictions only

Length 687 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ClcnkaQ9WUB7 Napsa-201ENSMUST00000002274 1560 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
ClcnkaQ9WUB7 Brf2-201ENSMUST00000033877 1899 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
ClcnkaQ9WUB7 Gtf2ird1-202ENSMUST00000074114 3330 ntTSL 1 (best) BASIC11.52□□□□□ -0.57
ClcnkaQ9WUB7 Atg2b-201ENSMUST00000041055 7546 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
ClcnkaQ9WUB7 Spata7-203ENSMUST00000101146 1913 ntTSL 1 (best) BASIC11.52□□□□□ -0.57
ClcnkaQ9WUB7 Kcna10-201ENSMUST00000055064 1913 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
ClcnkaQ9WUB7 9530077C05Rik-201ENSMUST00000058868 2223 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
ClcnkaQ9WUB7 St6galnac4-204ENSMUST00000179989 2826 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
ClcnkaQ9WUB7 Arid5a-204ENSMUST00000115032 4640 ntAPPRIS P3 TSL 1 (best) BASIC11.52□□□□□ -0.57
ClcnkaQ9WUB7 Col6a3-208ENSMUST00000188587 8285 ntTSL 5 BASIC11.52□□□□□ -0.57
ClcnkaQ9WUB7 Psmd9-201ENSMUST00000100729 2597 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
ClcnkaQ9WUB7 Pabpc2-201ENSMUST00000063219 2586 ntAPPRIS P1 BASIC11.52□□□□□ -0.57
ClcnkaQ9WUB7 Fnbp1-203ENSMUST00000100207 1680 ntTSL 5 BASIC11.52□□□□□ -0.57
ClcnkaQ9WUB7 Dnmt3l-201ENSMUST00000000746 1676 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
ClcnkaQ9WUB7 2610507I01Rik-201ENSMUST00000154354 1360 ntTSL 1 (best) BASIC11.52□□□□□ -0.57
ClcnkaQ9WUB7 Epb41l2-207ENSMUST00000218903 4115 ntAPPRIS ALT2 TSL 1 (best) BASIC11.52□□□□□ -0.57
ClcnkaQ9WUB7 Pitpnm3-201ENSMUST00000075258 6555 ntAPPRIS P3 TSL 1 (best) BASIC11.52□□□□□ -0.57
ClcnkaQ9WUB7 Plekhd1-201ENSMUST00000140770 3535 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
ClcnkaQ9WUB7 Sqle-202ENSMUST00000100640 2636 ntTSL 1 (best) BASIC11.52□□□□□ -0.57
ClcnkaQ9WUB7 Arid3b-209ENSMUST00000171444 4171 ntAPPRIS P2 TSL 5 BASIC11.52□□□□□ -0.57
ClcnkaQ9WUB7 Trpv6-203ENSMUST00000201471 2304 ntAPPRIS P2 TSL 1 (best) BASIC11.52□□□□□ -0.57
ClcnkaQ9WUB7 Gm11476-201ENSMUST00000127006 2019 ntTSL 1 (best) BASIC11.52□□□□□ -0.57
ClcnkaQ9WUB7 C030034I22Rik-202ENSMUST00000188481 4231 ntBASIC11.52□□□□□ -0.57
ClcnkaQ9WUB7 Atp6v1c2-208ENSMUST00000221129 1425 ntAPPRIS P1 TSL 5 BASIC11.52□□□□□ -0.57
ClcnkaQ9WUB7 Mast4-207ENSMUST00000167058 10636 ntAPPRIS P2 TSL 1 (best) BASIC11.52□□□□□ -0.57
ClcnkaQ9WUB7 Jrk-201ENSMUST00000050234 5853 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
ClcnkaQ9WUB7 Pank4-202ENSMUST00000070953 2706 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
ClcnkaQ9WUB7 Hps3-201ENSMUST00000012580 4016 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
ClcnkaQ9WUB7 Spryd7-201ENSMUST00000022497 4002 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
ClcnkaQ9WUB7 Osbp2-203ENSMUST00000102950 3077 ntAPPRIS ALT2 TSL 1 (best) BASIC11.51□□□□□ -0.57
ClcnkaQ9WUB7 Kif2c-201ENSMUST00000065896 2842 ntAPPRIS P3 TSL 1 (best) BASIC11.51□□□□□ -0.57
ClcnkaQ9WUB7 Lrrfip1-202ENSMUST00000068167 2849 ntAPPRIS ALT2 TSL 5 BASIC11.51□□□□□ -0.57
ClcnkaQ9WUB7 Stat3-203ENSMUST00000127638 4516 ntAPPRIS P3 TSL 1 (best) BASIC11.51□□□□□ -0.57
ClcnkaQ9WUB7 Gm7104-201ENSMUST00000179741 2532 ntBASIC11.51□□□□□ -0.57
ClcnkaQ9WUB7 Osgepl1-201ENSMUST00000027265 1868 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
ClcnkaQ9WUB7 Slc4a2-202ENSMUST00000115047 4264 ntAPPRIS ALT2 TSL 5 BASIC11.51□□□□□ -0.57
ClcnkaQ9WUB7 Ptdss2-201ENSMUST00000026568 3624 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
ClcnkaQ9WUB7 Grsf1-202ENSMUST00000113234 2286 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
ClcnkaQ9WUB7 Chrna3-201ENSMUST00000034851 4358 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
ClcnkaQ9WUB7 Plcg1-203ENSMUST00000109462 5107 ntAPPRIS P1 TSL 5 BASIC11.51□□□□□ -0.57
ClcnkaQ9WUB7 Dnajc12-201ENSMUST00000043317 3025 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
ClcnkaQ9WUB7 Rapgef3-205ENSMUST00000129223 3750 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
ClcnkaQ9WUB7 Gm45833-201ENSMUST00000211931 2730 ntTSL 5 BASIC11.51□□□□□ -0.57
ClcnkaQ9WUB7 Atp5d-202ENSMUST00000105366 781 ntTSL 2 BASIC11.51□□□□□ -0.57
ClcnkaQ9WUB7 Wfdc9-202ENSMUST00000109335 547 ntAPPRIS P1 TSL 5 BASIC11.51□□□□□ -0.57
ClcnkaQ9WUB7 Pkig-203ENSMUST00000109400 1059 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
ClcnkaQ9WUB7 Gm14127-201ENSMUST00000117906 678 ntBASIC11.51□□□□□ -0.57
ClcnkaQ9WUB7 1700012C14Rik-201ENSMUST00000132023 498 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
ClcnkaQ9WUB7 Surf2-201ENSMUST00000015017 1203 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
ClcnkaQ9WUB7 Snora78-201ENSMUST00000158630 128 ntBASIC11.51□□□□□ -0.57
ClcnkaQ9WUB7 Commd6-203ENSMUST00000168587 519 ntAPPRIS ALT2 TSL 1 (best) BASIC11.51□□□□□ -0.57
ClcnkaQ9WUB7 Gm6222-202ENSMUST00000182143 629 ntBASIC11.51□□□□□ -0.57
ClcnkaQ9WUB7 Gm38092-201ENSMUST00000195600 653 ntBASIC11.51□□□□□ -0.57
ClcnkaQ9WUB7 Gm18584-201ENSMUST00000203098 964 ntBASIC11.51□□□□□ -0.57
ClcnkaQ9WUB7 Gm45338-203ENSMUST00000210371 1009 ntTSL 5 BASIC11.51□□□□□ -0.57
ClcnkaQ9WUB7 Gm36198-201ENSMUST00000217490 416 ntTSL 3 BASIC11.51□□□□□ -0.57
ClcnkaQ9WUB7 AC160029.2-201ENSMUST00000218285 548 ntTSL 3 BASIC11.51□□□□□ -0.57
ClcnkaQ9WUB7 AC165260.3-202ENSMUST00000224550 1031 ntBASIC11.51□□□□□ -0.57
ClcnkaQ9WUB7 Krtcap2-201ENSMUST00000040888 1172 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
ClcnkaQ9WUB7 4921530L21Rik-201ENSMUST00000045892 1161 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
ClcnkaQ9WUB7 Olfr1368-201ENSMUST00000055298 1064 ntAPPRIS P1 BASIC11.51□□□□□ -0.57
ClcnkaQ9WUB7 1500011B03Rik-201ENSMUST00000061251 579 ntAPPRIS P5 TSL 1 (best) BASIC11.51□□□□□ -0.57
ClcnkaQ9WUB7 Rnase2b-201ENSMUST00000075648 759 ntAPPRIS P1 BASIC11.51□□□□□ -0.57
ClcnkaQ9WUB7 Pcgf1-201ENSMUST00000092614 866 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
ClcnkaQ9WUB7 Zfp433-202ENSMUST00000200889 2384 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
ClcnkaQ9WUB7 Gm32687-201ENSMUST00000220314 2379 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
ClcnkaQ9WUB7 Otop1-202ENSMUST00000114099 3141 ntAPPRIS P5 TSL 5 BASIC11.51□□□□□ -0.57
ClcnkaQ9WUB7 Tmem132a-202ENSMUST00000120524 3895 ntTSL 5 BASIC11.51□□□□□ -0.57
ClcnkaQ9WUB7 Gm5106-201ENSMUST00000181058 1334 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
ClcnkaQ9WUB7 Mgat1-203ENSMUST00000109194 2480 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
ClcnkaQ9WUB7 Adam32-202ENSMUST00000121438 2450 ntAPPRIS P3 TSL 1 (best) BASIC11.51□□□□□ -0.57
ClcnkaQ9WUB7 Pole2-201ENSMUST00000021359 1706 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
ClcnkaQ9WUB7 Mroh5-202ENSMUST00000110021 2145 ntAPPRIS ALT2 TSL 1 (best) BASIC11.51□□□□□ -0.57
ClcnkaQ9WUB7 Them4-201ENSMUST00000049822 1781 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
ClcnkaQ9WUB7 Rbm10-202ENSMUST00000082089 2562 ntAPPRIS ALT2 TSL 5 BASIC11.51□□□□□ -0.57
ClcnkaQ9WUB7 Armcx2-203ENSMUST00000119010 3007 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
ClcnkaQ9WUB7 Gm32036-201ENSMUST00000221484 2638 ntTSL 2 BASIC11.51□□□□□ -0.57
ClcnkaQ9WUB7 Kdm4d-201ENSMUST00000058796 2695 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
ClcnkaQ9WUB7 Sstr5-201ENSMUST00000051864 2733 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
ClcnkaQ9WUB7 1110034G24Rik-202ENSMUST00000110132 1471 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
ClcnkaQ9WUB7 Tsku-201ENSMUST00000094161 2760 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
ClcnkaQ9WUB7 Smg8-201ENSMUST00000020801 3218 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
ClcnkaQ9WUB7 Ackr4-202ENSMUST00000076147 2389 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
ClcnkaQ9WUB7 Pspc1-201ENSMUST00000022507 4114 ntAPPRIS P2 TSL 1 (best) BASIC11.5□□□□□ -0.57
ClcnkaQ9WUB7 Neurog3-201ENSMUST00000050103 1540 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
ClcnkaQ9WUB7 Wnt16-202ENSMUST00000128245 3285 ntTSL 1 (best) BASIC11.5□□□□□ -0.57
ClcnkaQ9WUB7 Plxnb2-201ENSMUST00000060808 6394 ntAPPRIS P1 TSL 5 BASIC11.5□□□□□ -0.57
ClcnkaQ9WUB7 Gm26857-201ENSMUST00000181580 3347 ntTSL 5 BASIC11.5□□□□□ -0.57
ClcnkaQ9WUB7 Zfp641-201ENSMUST00000023722 4212 ntAPPRIS ALT2 TSL 1 (best) BASIC11.5□□□□□ -0.57
ClcnkaQ9WUB7 Rgs11-202ENSMUST00000122058 2005 ntAPPRIS ALT2 TSL 2 BASIC11.5□□□□□ -0.57
ClcnkaQ9WUB7 Alg14-201ENSMUST00000039442 2037 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
ClcnkaQ9WUB7 Zfp536-203ENSMUST00000176114 4341 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
ClcnkaQ9WUB7 Syne3-203ENSMUST00000109927 5263 ntAPPRIS ALT2 TSL 5 BASIC11.5□□□□□ -0.57
ClcnkaQ9WUB7 Ppp2r2b-203ENSMUST00000120632 2081 ntAPPRIS ALT1 TSL 5 BASIC11.5□□□□□ -0.57
ClcnkaQ9WUB7 Flrt1-201ENSMUST00000113383 5859 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
ClcnkaQ9WUB7 Myh2-203ENSMUST00000170159 6083 ntAPPRIS P1 TSL 5 BASIC11.5□□□□□ -0.57
ClcnkaQ9WUB7 Zfp961-202ENSMUST00000131237 2689 ntAPPRIS ALT2 TSL 3 BASIC11.5□□□□□ -0.57
ClcnkaQ9WUB7 Xkr8-201ENSMUST00000045550 4245 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
ClcnkaQ9WUB7 Polrmt-201ENSMUST00000020580 3755 ntAPPRIS P2 TSL 1 (best) BASIC11.5□□□□□ -0.57
ClcnkaQ9WUB7 Cep41-203ENSMUST00000115131 2256 ntAPPRIS ALT2 TSL 5 BASIC11.5□□□□□ -0.57
Retrieved 100 of 76,532 protein–RNA pairs in 36.8 ms