Protein–RNA interactions for Protein: Q9ES64

Ush1c, Harmonin, mousemouse

Predictions only

Length 910 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ush1cQ9ES64 Tmem86b-201ENSMUST00000055085 1222 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Ush1cQ9ES64 Pdzd11-202ENSMUST00000059099 1041 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Ush1cQ9ES64 Tgif2-ps2-201ENSMUST00000061746 711 ntBASIC14.3□□□□□ -0.12
Ush1cQ9ES64 Sh3pxd2a-202ENSMUST00000111800 10380 ntAPPRIS ALT2 TSL 1 (best) BASIC14.3□□□□□ -0.12
Ush1cQ9ES64 Anks1b-224ENSMUST00000182960 3397 ntTSL 5 BASIC14.3□□□□□ -0.12
Ush1cQ9ES64 Tnip1-201ENSMUST00000018482 2810 ntAPPRIS P3 TSL 1 (best) BASIC14.3□□□□□ -0.12
Ush1cQ9ES64 Gm13883-201ENSMUST00000150450 1404 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Ush1cQ9ES64 Gm3693-201ENSMUST00000182077 2865 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Ush1cQ9ES64 Nefm-202ENSMUST00000111089 3680 ntAPPRIS ALT2 TSL 1 (best) BASIC14.3□□□□□ -0.12
Ush1cQ9ES64 Bcl2l14-201ENSMUST00000032321 2243 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Ush1cQ9ES64 AC126257.2-201ENSMUST00000215507 2300 ntBASIC14.3□□□□□ -0.12
Ush1cQ9ES64 Jup-201ENSMUST00000001592 3205 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Ush1cQ9ES64 Car10-206ENSMUST00000107863 3334 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Ush1cQ9ES64 Ep400-202ENSMUST00000112433 3399 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Ush1cQ9ES64 Fn1-213ENSMUST00000188674 7680 ntAPPRIS ALT2 TSL 1 (best) BASIC14.3□□□□□ -0.12
Ush1cQ9ES64 Fn1-217ENSMUST00000190780 7694 ntAPPRIS ALT2 TSL 1 (best) BASIC14.3□□□□□ -0.12
Ush1cQ9ES64 AC159314.1-201ENSMUST00000216917 3485 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Ush1cQ9ES64 Rbm47-202ENSMUST00000094757 4643 ntAPPRIS P3 TSL 1 (best) BASIC14.29□□□□□ -0.12
Ush1cQ9ES64 Anp32e-204ENSMUST00000168106 2890 ntTSL 5 BASIC14.29□□□□□ -0.12
Ush1cQ9ES64 Zfp541-202ENSMUST00000209369 4879 ntAPPRIS P2 TSL 5 BASIC14.29□□□□□ -0.12
Ush1cQ9ES64 Afg3l1-201ENSMUST00000001520 4227 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Ush1cQ9ES64 Pex1-201ENSMUST00000006061 4433 ntAPPRIS P3 TSL 1 (best) BASIC14.29□□□□□ -0.12
Ush1cQ9ES64 Gtf2ird1-209ENSMUST00000171794 3524 ntAPPRIS ALT2 TSL 1 (best) BASIC14.29□□□□□ -0.12
Ush1cQ9ES64 Mrpl53-201ENSMUST00000113938 695 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Ush1cQ9ES64 Cmss1-201ENSMUST00000114371 930 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Ush1cQ9ES64 Apoc3-203ENSMUST00000121916 709 ntTSL 2 BASIC14.29□□□□□ -0.12
Ush1cQ9ES64 Cyba-201ENSMUST00000017604 744 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Ush1cQ9ES64 Trp53tg5-201ENSMUST00000017864 934 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Ush1cQ9ES64 H2-Pa-201ENSMUST00000182803 626 ntBASIC14.29□□□□□ -0.12
Ush1cQ9ES64 Gm38144-201ENSMUST00000192790 465 ntBASIC14.29□□□□□ -0.12
Ush1cQ9ES64 AC134335.2-201ENSMUST00000227660 440 ntBASIC14.29□□□□□ -0.12
Ush1cQ9ES64 Gm4559-201ENSMUST00000080669 600 ntAPPRIS P1 BASIC14.29□□□□□ -0.12
Ush1cQ9ES64 Hist1h2al-201ENSMUST00000091708 339 ntBASIC14.29□□□□□ -0.12
Ush1cQ9ES64 4930520O04Rik-202ENSMUST00000131898 2660 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Ush1cQ9ES64 Klhl29-202ENSMUST00000218384 2716 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Ush1cQ9ES64 Cux1-204ENSMUST00000175975 10945 ntAPPRIS ALT2 TSL 1 (best) BASIC14.29□□□□□ -0.12
Ush1cQ9ES64 Cabp4-201ENSMUST00000025761 1431 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Ush1cQ9ES64 Syngr2-201ENSMUST00000026649 1520 ntAPPRIS P2 TSL 1 (best) BASIC14.29□□□□□ -0.12
Ush1cQ9ES64 Pcdhgb5-201ENSMUST00000192535 4670 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Ush1cQ9ES64 Prkcg-201ENSMUST00000100301 3127 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Ush1cQ9ES64 Smpd2-201ENSMUST00000019965 1602 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Ush1cQ9ES64 F730043M19Rik-204ENSMUST00000148740 3312 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Ush1cQ9ES64 Ptprh-201ENSMUST00000049113 3495 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Ush1cQ9ES64 2900041M22Rik-201ENSMUST00000155384 1784 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Ush1cQ9ES64 Arhgap29-201ENSMUST00000037958 5787 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Ush1cQ9ES64 Oplah-209ENSMUST00000171340 4085 ntAPPRIS P1 TSL 5 BASIC14.29□□□□□ -0.12
Ush1cQ9ES64 Wapl-202ENSMUST00000090027 4185 ntAPPRIS ALT2 TSL 5 BASIC14.29□□□□□ -0.12
Ush1cQ9ES64 Gab3-201ENSMUST00000037374 2153 ntAPPRIS P2 TSL 1 (best) BASIC14.29□□□□□ -0.12
Ush1cQ9ES64 AC160411.1-201ENSMUST00000218544 4560 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Ush1cQ9ES64 Polm-201ENSMUST00000020767 2924 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Ush1cQ9ES64 Gm45496-201ENSMUST00000209918 2917 ntBASIC14.28□□□□□ -0.12
Ush1cQ9ES64 Inip-201ENSMUST00000095063 3237 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Ush1cQ9ES64 A930038B10Rik-202ENSMUST00000181044 3415 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Ush1cQ9ES64 Per1-202ENSMUST00000101004 3507 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Ush1cQ9ES64 Ints6l-207ENSMUST00000186445 3608 ntAPPRIS P1 TSL 2 BASIC14.28□□□□□ -0.12
Ush1cQ9ES64 Gnas-203ENSMUST00000087876 3719 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Ush1cQ9ES64 Nsd3-206ENSMUST00000142395 10105 ntAPPRIS P2 TSL 5 BASIC14.28□□□□□ -0.12
Ush1cQ9ES64 Limk2-201ENSMUST00000101638 3514 ntAPPRIS P4 TSL 1 (best) BASIC14.28□□□□□ -0.12
Ush1cQ9ES64 Selenoh-203ENSMUST00000117299 747 ntAPPRIS P2 TSL 1 (best) BASIC14.28□□□□□ -0.12
Ush1cQ9ES64 Crybb3-203ENSMUST00000118226 892 ntAPPRIS P1 TSL 3 BASIC14.28□□□□□ -0.12
Ush1cQ9ES64 A830082K12Rik-201ENSMUST00000123998 2203 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Ush1cQ9ES64 Gm15587-201ENSMUST00000146326 3493 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Ush1cQ9ES64 Pax8-208ENSMUST00000153601 1226 ntTSL 5 BASIC14.28□□□□□ -0.12
Ush1cQ9ES64 Gm13568-201ENSMUST00000156099 446 ntTSL 5 BASIC14.28□□□□□ -0.12
Ush1cQ9ES64 Gm15294-202ENSMUST00000182079 366 ntAPPRIS P1 BASIC14.28□□□□□ -0.12
Ush1cQ9ES64 Gm29608-201ENSMUST00000190444 463 ntBASIC14.28□□□□□ -0.12
Ush1cQ9ES64 Gm45552-201ENSMUST00000209340 778 ntTSL 3 BASIC14.28□□□□□ -0.12
Ush1cQ9ES64 Gm8227-201ENSMUST00000223306 571 ntBASIC14.28□□□□□ -0.12
Ush1cQ9ES64 Gm15222-202ENSMUST00000228667 1726 ntBASIC14.28□□□□□ -0.12
Ush1cQ9ES64 1700020A23Rik-201ENSMUST00000028898 712 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Ush1cQ9ES64 Fbxl22-201ENSMUST00000056890 3935 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Ush1cQ9ES64 Stx17-201ENSMUST00000064765 1531 ntAPPRIS P1 TSL 5 BASIC14.28□□□□□ -0.12
Ush1cQ9ES64 Crybb3-201ENSMUST00000076069 816 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Ush1cQ9ES64 Ecsit-201ENSMUST00000098937 1673 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Ush1cQ9ES64 Rims3-202ENSMUST00000106283 6437 ntAPPRIS P1 TSL 5 BASIC14.28□□□□□ -0.12
Ush1cQ9ES64 Corin-202ENSMUST00000167460 4639 ntAPPRIS ALT2 TSL 1 (best) BASIC14.28□□□□□ -0.12
Ush1cQ9ES64 Epb41l3-202ENSMUST00000112680 4073 ntAPPRIS ALT2 TSL 5 BASIC14.28□□□□□ -0.12
Ush1cQ9ES64 Lox-201ENSMUST00000025409 3604 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Ush1cQ9ES64 Hoxc5-201ENSMUST00000001709 2923 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Ush1cQ9ES64 Gm20649-201ENSMUST00000160950 2740 ntTSL 2 BASIC14.28□□□□□ -0.12
Ush1cQ9ES64 Ephx3-201ENSMUST00000087721 2416 ntAPPRIS P3 TSL 1 (best) BASIC14.27□□□□□ -0.12
Ush1cQ9ES64 Shtn1-201ENSMUST00000047511 4081 ntAPPRIS P4 TSL 1 (best) BASIC14.27□□□□□ -0.12
Ush1cQ9ES64 Ap1b1-203ENSMUST00000109897 3942 ntTSL 5 BASIC14.27□□□□□ -0.12
Ush1cQ9ES64 Tspan13-201ENSMUST00000020896 1932 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Ush1cQ9ES64 Gm45532-201ENSMUST00000210342 3620 ntBASIC14.27□□□□□ -0.12
Ush1cQ9ES64 Maip1-201ENSMUST00000027114 3540 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Ush1cQ9ES64 Ftsj1-201ENSMUST00000033513 3425 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Ush1cQ9ES64 Pbrm1-208ENSMUST00000112098 6566 ntTSL 5 BASIC14.27□□□□□ -0.12
Ush1cQ9ES64 Gm42463-201ENSMUST00000198041 4886 ntBASIC14.27□□□□□ -0.12
Ush1cQ9ES64 Gtf2e2-201ENSMUST00000167264 1566 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Ush1cQ9ES64 Ccdc160-201ENSMUST00000101588 1536 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Ush1cQ9ES64 Gnb2-202ENSMUST00000111020 1470 ntTSL 5 BASIC14.27□□□□□ -0.12
Ush1cQ9ES64 Gm5779-202ENSMUST00000219564 1477 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
Ush1cQ9ES64 B3gntl1-201ENSMUST00000062654 1488 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.12
Ush1cQ9ES64 Mbd1-202ENSMUST00000224047 2838 ntAPPRIS P1 BASIC14.27□□□□□ -0.12
Ush1cQ9ES64 Pofut1-201ENSMUST00000049863 5600 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Ush1cQ9ES64 4930423C22Rik-201ENSMUST00000193863 1311 ntBASIC14.27□□□□□ -0.12
Ush1cQ9ES64 Runx3-201ENSMUST00000056977 3884 ntAPPRIS P2 TSL 1 (best) BASIC14.27□□□□□ -0.13
Ush1cQ9ES64 Rab4a-201ENSMUST00000117702 1080 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Ush1cQ9ES64 Gm12485-201ENSMUST00000119641 291 ntBASIC14.27□□□□□ -0.13
Retrieved 100 of 76,532 protein–RNA pairs in 50.9 ms