Protein–RNA interactions for Protein: Q99MA9

Nkx6-1, Homeobox protein Nkx-6.1, mousemouse

Predictions only

Length 365 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkx6-1Q99MA9 Acbd5-208ENSMUST00000226571 3802 ntAPPRIS ALT2 BASIC11.73□□□□□ -0.53
Nkx6-1Q99MA9 Slc35e2-202ENSMUST00000105608 6291 ntAPPRIS P1 TSL 5 BASIC11.73□□□□□ -0.53
Nkx6-1Q99MA9 Glis3-202ENSMUST00000112612 3016 ntAPPRIS ALT2 TSL 1 (best) BASIC11.73□□□□□ -0.53
Nkx6-1Q99MA9 Ska1-201ENSMUST00000040188 2669 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Nkx6-1Q99MA9 Brd2-202ENSMUST00000095347 2617 ntTSL 5 BASIC11.73□□□□□ -0.53
Nkx6-1Q99MA9 Limch1-204ENSMUST00000118242 5050 ntAPPRIS ALT2 TSL 5 BASIC11.73□□□□□ -0.53
Nkx6-1Q99MA9 Hdac10-201ENSMUST00000082197 2412 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Nkx6-1Q99MA9 Gcat-201ENSMUST00000006544 2365 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Nkx6-1Q99MA9 Bak1-202ENSMUST00000078691 2387 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Nkx6-1Q99MA9 Prkca-202ENSMUST00000100302 2265 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
Nkx6-1Q99MA9 Cacna1g-208ENSMUST00000107790 8035 ntAPPRIS ALT2 TSL 1 (best) BASIC11.72□□□□□ -0.53
Nkx6-1Q99MA9 Cacna1g-204ENSMUST00000107785 7523 ntAPPRIS ALT2 TSL 5 BASIC11.72□□□□□ -0.53
Nkx6-1Q99MA9 Flt3-201ENSMUST00000049324 3657 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Nkx6-1Q99MA9 Ap1s2-201ENSMUST00000033734 1785 ntAPPRIS ALT1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Nkx6-1Q99MA9 Rassf5-201ENSMUST00000027688 3485 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Nkx6-1Q99MA9 Thegl-201ENSMUST00000031161 1719 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Nkx6-1Q99MA9 C2cd4c-201ENSMUST00000059699 6729 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Nkx6-1Q99MA9 Dio1-201ENSMUST00000082426 1690 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Nkx6-1Q99MA9 Lman1l-202ENSMUST00000093832 1685 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Nkx6-1Q99MA9 Uimc1-202ENSMUST00000099496 1678 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
Nkx6-1Q99MA9 Gm38355-201ENSMUST00000192514 1570 ntBASIC11.72□□□□□ -0.53
Nkx6-1Q99MA9 Timp3-201ENSMUST00000020234 4722 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Nkx6-1Q99MA9 Pdpk1-204ENSMUST00000115409 4623 ntTSL 5 BASIC11.72□□□□□ -0.53
Nkx6-1Q99MA9 Olfr322-202ENSMUST00000213232 4632 ntAPPRIS P1 TSL 5 BASIC11.72□□□□□ -0.53
Nkx6-1Q99MA9 Sh3gl3-206ENSMUST00000179318 1489 ntTSL 5 BASIC11.72□□□□□ -0.53
Nkx6-1Q99MA9 Tmem169-201ENSMUST00000027380 2928 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Nkx6-1Q99MA9 Eya1-203ENSMUST00000168081 4366 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
Nkx6-1Q99MA9 Grin1-201ENSMUST00000028335 4238 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
Nkx6-1Q99MA9 Gm43056-201ENSMUST00000197865 2791 ntBASIC11.72□□□□□ -0.53
Nkx6-1Q99MA9 Gsdmcl-ps-203ENSMUST00000188367 1375 ntBASIC11.72□□□□□ -0.53
Nkx6-1Q99MA9 Colgalt2-201ENSMUST00000044311 4093 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Nkx6-1Q99MA9 Sec62-201ENSMUST00000029256 3967 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Nkx6-1Q99MA9 Adgrl1-204ENSMUST00000131717 5152 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
Nkx6-1Q99MA9 Fam114a2-201ENSMUST00000020831 2557 ntAPPRIS P3 TSL 1 (best) BASIC11.72□□□□□ -0.53
Nkx6-1Q99MA9 Tceanc2-202ENSMUST00000057043 6431 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Nkx6-1Q99MA9 Cela3b-201ENSMUST00000102522 926 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Nkx6-1Q99MA9 Ccdc163-204ENSMUST00000106464 1213 ntAPPRIS P2 TSL 5 BASIC11.72□□□□□ -0.53
Nkx6-1Q99MA9 Fam166b-203ENSMUST00000107929 865 ntAPPRIS P5 TSL 5 BASIC11.72□□□□□ -0.53
Nkx6-1Q99MA9 Gm12795-201ENSMUST00000117594 539 ntBASIC11.72□□□□□ -0.53
Nkx6-1Q99MA9 Gm12314-201ENSMUST00000118104 538 ntBASIC11.72□□□□□ -0.53
Nkx6-1Q99MA9 Tmem74bos-201ENSMUST00000137422 390 ntTSL 3 BASIC11.72□□□□□ -0.53
Nkx6-1Q99MA9 Gm10550-201ENSMUST00000188846 982 ntTSL 2 BASIC11.72□□□□□ -0.53
Nkx6-1Q99MA9 Gm38210-201ENSMUST00000191944 809 ntBASIC11.72□□□□□ -0.53
Nkx6-1Q99MA9 1700030I03Rik-201ENSMUST00000192978 942 ntBASIC11.72□□□□□ -0.53
Nkx6-1Q99MA9 Fgf5-202ENSMUST00000200059 600 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
Nkx6-1Q99MA9 Gm4607-201ENSMUST00000206649 577 ntBASIC11.72□□□□□ -0.53
Nkx6-1Q99MA9 AC163667.3-201ENSMUST00000225774 222 ntBASIC11.72□□□□□ -0.53
Nkx6-1Q99MA9 Tff1-201ENSMUST00000024831 478 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Nkx6-1Q99MA9 Gm11555-201ENSMUST00000073126 492 ntTSL 5 BASIC11.72□□□□□ -0.53
Nkx6-1Q99MA9 Gm4950-201ENSMUST00000091905 618 ntAPPRIS P1 BASIC11.72□□□□□ -0.53
Nkx6-1Q99MA9 Cdk5rap3-201ENSMUST00000103152 2250 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Nkx6-1Q99MA9 Csk-209ENSMUST00000217314 2162 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Nkx6-1Q99MA9 Dnm1-214ENSMUST00000201433 3146 ntAPPRIS ALT1 TSL 5 BASIC11.72□□□□□ -0.53
Nkx6-1Q99MA9 Dmkn-205ENSMUST00000165887 2063 ntAPPRIS ALT2 TSL 1 (best) BASIC11.72□□□□□ -0.53
Nkx6-1Q99MA9 Slc26a4-201ENSMUST00000001253 3075 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Nkx6-1Q99MA9 Stx18-203ENSMUST00000114126 3002 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Nkx6-1Q99MA9 Reep5-201ENSMUST00000006027 2894 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Nkx6-1Q99MA9 Srrm1-203ENSMUST00000105861 3797 ntAPPRIS ALT2 TSL 5 BASIC11.72□□□□□ -0.53
Nkx6-1Q99MA9 Caprin2-202ENSMUST00000111569 3697 ntAPPRIS P2 TSL 1 (best) BASIC11.72□□□□□ -0.53
Nkx6-1Q99MA9 Sh3bp5-202ENSMUST00000100730 2633 ntAPPRIS ALT2 TSL 1 (best) BASIC11.72□□□□□ -0.53
Nkx6-1Q99MA9 0610040F04Rik-201ENSMUST00000137478 1734 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
Nkx6-1Q99MA9 Fnbp1-203ENSMUST00000100207 1680 ntTSL 5 BASIC11.71□□□□□ -0.53
Nkx6-1Q99MA9 Kmt5b-205ENSMUST00000113972 4159 ntAPPRIS ALT2 TSL 5 BASIC11.71□□□□□ -0.53
Nkx6-1Q99MA9 Kmt5b-207ENSMUST00000113974 4150 ntAPPRIS P3 TSL 5 BASIC11.71□□□□□ -0.53
Nkx6-1Q99MA9 Satb2-202ENSMUST00000114415 5805 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Nkx6-1Q99MA9 Brwd1-201ENSMUST00000023631 8209 ntAPPRIS ALT2 TSL 1 (best) BASIC11.71□□□□□ -0.53
Nkx6-1Q99MA9 6030458C11Rik-202ENSMUST00000227299 3206 ntBASIC11.71□□□□□ -0.53
Nkx6-1Q99MA9 Srr-204ENSMUST00000121738 3183 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Nkx6-1Q99MA9 Nat8f6-202ENSMUST00000174143 1571 ntAPPRIS P1 TSL 3 BASIC11.71□□□□□ -0.53
Nkx6-1Q99MA9 Gngt2-201ENSMUST00000036088 1587 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Nkx6-1Q99MA9 Gsg1l-201ENSMUST00000073935 3923 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Nkx6-1Q99MA9 Tbata-201ENSMUST00000035894 1506 ntAPPRIS P3 TSL 5 BASIC11.71□□□□□ -0.53
Nkx6-1Q99MA9 1300017J02Rik-201ENSMUST00000035163 2284 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Nkx6-1Q99MA9 Pgghg-201ENSMUST00000079403 2981 ntAPPRIS P2 TSL 1 (best) BASIC11.71□□□□□ -0.53
Nkx6-1Q99MA9 Gm20721-201ENSMUST00000168292 1484 ntAPPRIS P1 TSL 5 BASIC11.71□□□□□ -0.53
Nkx6-1Q99MA9 Fbxl19-202ENSMUST00000186116 3641 ntTSL 5 BASIC11.71□□□□□ -0.53
Nkx6-1Q99MA9 Nacc1-201ENSMUST00000001975 4300 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Nkx6-1Q99MA9 Trio-201ENSMUST00000090247 11495 ntAPPRIS P1 TSL 5 BASIC11.71□□□□□ -0.53
Nkx6-1Q99MA9 Mfsd4b4-202ENSMUST00000178563 3523 ntTSL 5 BASIC11.71□□□□□ -0.53
Nkx6-1Q99MA9 Gtf3c5-202ENSMUST00000113889 2667 ntAPPRIS ALT2 TSL 1 (best) BASIC11.71□□□□□ -0.53
Nkx6-1Q99MA9 Olfr139-204ENSMUST00000214111 1311 ntAPPRIS P1 TSL 5 BASIC11.71□□□□□ -0.53
Nkx6-1Q99MA9 Naa40-201ENSMUST00000025675 3275 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Nkx6-1Q99MA9 Oxr1-203ENSMUST00000090096 4515 ntTSL 5 BASIC11.71□□□□□ -0.53
Nkx6-1Q99MA9 Dnm1-201ENSMUST00000078352 3246 ntAPPRIS P2 TSL 1 (best) BASIC11.71□□□□□ -0.53
Nkx6-1Q99MA9 Gm22133-201ENSMUST00000102082 109 ntBASIC11.71□□□□□ -0.53
Nkx6-1Q99MA9 Faap20-202ENSMUST00000105627 710 ntAPPRIS ALT2 TSL 2 BASIC11.71□□□□□ -0.53
Nkx6-1Q99MA9 Eif5a-206ENSMUST00000108609 849 ntAPPRIS P1 TSL 3 BASIC11.71□□□□□ -0.53
Nkx6-1Q99MA9 Tcf7l2-205ENSMUST00000111651 1127 ntTSL 1 (best) BASIC11.71□□□□□ -0.53
Nkx6-1Q99MA9 Sumo2-203ENSMUST00000117589 987 ntTSL 3 BASIC11.71□□□□□ -0.53
Nkx6-1Q99MA9 Gm5863-201ENSMUST00000121760 1008 ntBASIC11.71□□□□□ -0.53
Nkx6-1Q99MA9 Gm13257-201ENSMUST00000132840 665 ntTSL 3 BASIC11.71□□□□□ -0.53
Nkx6-1Q99MA9 Rdh9-203ENSMUST00000136223 1276 ntTSL 1 (best) BASIC11.71□□□□□ -0.53
Nkx6-1Q99MA9 Dlx1as-202ENSMUST00000137251 647 ntTSL 1 (best) BASIC11.71□□□□□ -0.53
Nkx6-1Q99MA9 2310057J18Rik-204ENSMUST00000152363 1043 ntTSL 1 (best) BASIC11.71□□□□□ -0.53
Nkx6-1Q99MA9 Gm12678-201ENSMUST00000154177 692 ntTSL 1 (best) BASIC11.71□□□□□ -0.53
Nkx6-1Q99MA9 Sh2d6-203ENSMUST00000159877 1210 ntAPPRIS ALT2 TSL 1 (best) BASIC11.71□□□□□ -0.53
Nkx6-1Q99MA9 Sh2d6-206ENSMUST00000162561 1251 ntAPPRIS P5 TSL 1 (best) BASIC11.71□□□□□ -0.53
Nkx6-1Q99MA9 U2af1l4-234ENSMUST00000171850 564 ntTSL 5 BASIC11.71□□□□□ -0.53
Nkx6-1Q99MA9 Gng13-202ENSMUST00000172002 719 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Nkx6-1Q99MA9 Gm8494-201ENSMUST00000178171 1233 ntBASIC11.71□□□□□ -0.53
Retrieved 100 of 76,532 protein–RNA pairs in 33.7 ms