Protein–RNA interactions for Protein: Q99LU0

Chmp1b1, Charged multivesicular body protein 1b-1, mousemouse

Predictions only

Length 199 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chmp1b1Q99LU0 Ap3m2-201ENSMUST00000163739 3417 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Chmp1b1Q99LU0 Tmem215-201ENSMUST00000049655 4733 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Chmp1b1Q99LU0 Pdxdc1-204ENSMUST00000115804 2880 ntAPPRIS P3 TSL 1 (best) BASIC11.82□□□□□ -0.52
Chmp1b1Q99LU0 Kcnma1-205ENSMUST00000145596 12094 ntAPPRIS ALT2 BASIC11.82□□□□□ -0.52
Chmp1b1Q99LU0 Sh3bp2-202ENSMUST00000101316 3031 ntAPPRIS ALT2 TSL 1 (best) BASIC11.82□□□□□ -0.52
Chmp1b1Q99LU0 Dcaf4-208ENSMUST00000223291 2005 ntAPPRIS ALT2 TSL 1 (best) BASIC11.82□□□□□ -0.52
Chmp1b1Q99LU0 Armcx4-201ENSMUST00000124226 7996 ntAPPRIS P1 TSL 2 BASIC11.82□□□□□ -0.52
Chmp1b1Q99LU0 Kif1a-201ENSMUST00000086819 5097 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
Chmp1b1Q99LU0 Tnn-202ENSMUST00000131919 3987 ntTSL 5 BASIC11.82□□□□□ -0.52
Chmp1b1Q99LU0 Mirg-202ENSMUST00000181543 1300 ntTSL 5 BASIC11.82□□□□□ -0.52
Chmp1b1Q99LU0 Gm13075-202ENSMUST00000149247 1621 ntTSL 5 BASIC11.82□□□□□ -0.52
Chmp1b1Q99LU0 Gm26878-201ENSMUST00000181778 1644 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
Chmp1b1Q99LU0 Gm26635-201ENSMUST00000181077 3199 ntTSL 5 BASIC11.81□□□□□ -0.52
Chmp1b1Q99LU0 Slc44a4-201ENSMUST00000007249 2261 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Chmp1b1Q99LU0 CT009713.10-201ENSMUST00000225013 1986 ntBASIC11.81□□□□□ -0.52
Chmp1b1Q99LU0 Slc39a8-205ENSMUST00000167390 3533 ntAPPRIS P1 TSL 5 BASIC11.81□□□□□ -0.52
Chmp1b1Q99LU0 Adcy9-201ENSMUST00000005719 4457 ntAPPRIS P3 TSL 1 (best) BASIC11.81□□□□□ -0.52
Chmp1b1Q99LU0 Kif28-202ENSMUST00000211943 2643 ntAPPRIS ALT2 TSL 5 BASIC11.81□□□□□ -0.52
Chmp1b1Q99LU0 Tardbp-210ENSMUST00000172073 6513 ntTSL 5 BASIC11.81□□□□□ -0.52
Chmp1b1Q99LU0 B230344G16Rik-201ENSMUST00000180782 2024 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
Chmp1b1Q99LU0 Alppl2-202ENSMUST00000188310 2016 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Chmp1b1Q99LU0 Pgm3-201ENSMUST00000070064 2666 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Chmp1b1Q99LU0 Rfx7-205ENSMUST00000184015 1554 ntTSL 5 BASIC11.81□□□□□ -0.52
Chmp1b1Q99LU0 Isg20-204ENSMUST00000121645 1087 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
Chmp1b1Q99LU0 Gm1335-201ENSMUST00000121653 386 ntBASIC11.81□□□□□ -0.52
Chmp1b1Q99LU0 Oaz2-ps-201ENSMUST00000121735 537 ntBASIC11.81□□□□□ -0.52
Chmp1b1Q99LU0 U2af1l4-215ENSMUST00000166257 546 ntTSL 5 BASIC11.81□□□□□ -0.52
Chmp1b1Q99LU0 Myl10-202ENSMUST00000196068 911 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
Chmp1b1Q99LU0 Myl10-203ENSMUST00000196436 598 ntTSL 3 BASIC11.81□□□□□ -0.52
Chmp1b1Q99LU0 Gm8099-201ENSMUST00000200510 742 ntBASIC11.81□□□□□ -0.52
Chmp1b1Q99LU0 AC110091.3-202ENSMUST00000217104 791 ntTSL 5 BASIC11.81□□□□□ -0.52
Chmp1b1Q99LU0 Atp6v0c-201ENSMUST00000024932 1183 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Chmp1b1Q99LU0 Mir339-201ENSMUST00000083659 96 ntBASIC11.81□□□□□ -0.52
Chmp1b1Q99LU0 Lclat1-201ENSMUST00000067545 4467 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Chmp1b1Q99LU0 Cdc14a-201ENSMUST00000090464 4485 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Chmp1b1Q99LU0 Cast-211ENSMUST00000223206 5141 ntAPPRIS ALT2 TSL 5 BASIC11.81□□□□□ -0.52
Chmp1b1Q99LU0 Dgcr8-201ENSMUST00000009321 4320 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Chmp1b1Q99LU0 Plekha6-203ENSMUST00000186917 4820 ntAPPRIS P2 TSL 1 (best) BASIC11.81□□□□□ -0.52
Chmp1b1Q99LU0 Fam214b-203ENSMUST00000107957 3234 ntAPPRIS P1 TSL 5 BASIC11.81□□□□□ -0.52
Chmp1b1Q99LU0 Hook2-204ENSMUST00000210326 3080 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
Chmp1b1Q99LU0 Otx1-201ENSMUST00000006071 2789 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Chmp1b1Q99LU0 Cad-211ENSMUST00000202795 6559 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
Chmp1b1Q99LU0 Cd276-202ENSMUST00000165365 3603 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Chmp1b1Q99LU0 Epb41l2-207ENSMUST00000218903 4115 ntAPPRIS ALT2 TSL 1 (best) BASIC11.81□□□□□ -0.52
Chmp1b1Q99LU0 H2-DMb2-201ENSMUST00000041982 1347 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Chmp1b1Q99LU0 Th-201ENSMUST00000000219 1829 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Chmp1b1Q99LU0 Tars2-202ENSMUST00000074339 2313 ntAPPRIS ALT2 TSL 1 (best) BASIC11.81□□□□□ -0.52
Chmp1b1Q99LU0 Pyroxd1-201ENSMUST00000041852 2831 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Chmp1b1Q99LU0 Zfp467-204ENSMUST00000114559 3163 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
Chmp1b1Q99LU0 Gm38157-201ENSMUST00000194178 1698 ntBASIC11.81□□□□□ -0.52
Chmp1b1Q99LU0 Bbs4-201ENSMUST00000026265 2518 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Chmp1b1Q99LU0 Olfr763-201ENSMUST00000077460 2523 ntAPPRIS P1 BASIC11.81□□□□□ -0.52
Chmp1b1Q99LU0 Ndc1-204ENSMUST00000139560 4584 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Chmp1b1Q99LU0 Gm12846-201ENSMUST00000120431 1373 ntBASIC11.8□□□□□ -0.52
Chmp1b1Q99LU0 Nab1-204ENSMUST00000170269 1371 ntTSL 5 BASIC11.8□□□□□ -0.52
Chmp1b1Q99LU0 Cdc25c-201ENSMUST00000060710 1941 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Chmp1b1Q99LU0 Rnf182-201ENSMUST00000059986 3544 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Chmp1b1Q99LU0 Tmod2-201ENSMUST00000064433 9884 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Chmp1b1Q99LU0 Clpx-202ENSMUST00000113824 2809 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
Chmp1b1Q99LU0 Trpv1-201ENSMUST00000006106 2340 ntAPPRIS ALT2 TSL 5 BASIC11.8□□□□□ -0.52
Chmp1b1Q99LU0 Gm8206-201ENSMUST00000164139 1956 ntTSL 5 BASIC11.8□□□□□ -0.52
Chmp1b1Q99LU0 Gm36500-201ENSMUST00000221821 1626 ntTSL 5 BASIC11.8□□□□□ -0.52
Chmp1b1Q99LU0 Dnajb5-203ENSMUST00000098112 3093 ntAPPRIS P2 TSL 1 (best) BASIC11.8□□□□□ -0.52
Chmp1b1Q99LU0 Cutal-201ENSMUST00000028228 2179 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
Chmp1b1Q99LU0 Ccdc162-208ENSMUST00000179614 2739 ntTSL 5 BASIC11.8□□□□□ -0.52
Chmp1b1Q99LU0 Timm10-202ENSMUST00000111631 564 ntAPPRIS P1 TSL 3 BASIC11.8□□□□□ -0.52
Chmp1b1Q99LU0 9230102O04Rik-201ENSMUST00000114915 528 ntAPPRIS P1 TSL 2 BASIC11.8□□□□□ -0.52
Chmp1b1Q99LU0 Leng8-202ENSMUST00000117274 874 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
Chmp1b1Q99LU0 Gm12384-201ENSMUST00000119228 919 ntBASIC11.8□□□□□ -0.52
Chmp1b1Q99LU0 Gm13813-201ENSMUST00000120998 787 ntBASIC11.8□□□□□ -0.52
Chmp1b1Q99LU0 Gm12291-201ENSMUST00000121627 311 ntBASIC11.8□□□□□ -0.52
Chmp1b1Q99LU0 Dlx1as-202ENSMUST00000137251 647 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
Chmp1b1Q99LU0 1700030C14Rik-201ENSMUST00000139912 756 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
Chmp1b1Q99LU0 1700120C14Rik-202ENSMUST00000187967 391 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
Chmp1b1Q99LU0 AY702102-202ENSMUST00000194651 1173 ntBASIC11.8□□□□□ -0.52
Chmp1b1Q99LU0 Gm5149-201ENSMUST00000199768 620 ntTSL 3 BASIC11.8□□□□□ -0.52
Chmp1b1Q99LU0 Gm4768-201ENSMUST00000206199 686 ntBASIC11.8□□□□□ -0.52
Chmp1b1Q99LU0 Cyp2b10-201ENSMUST00000005477 1822 ntAPPRIS ALT2 TSL 1 (best) BASIC11.8□□□□□ -0.52
Chmp1b1Q99LU0 Qrfp-201ENSMUST00000057407 2927 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Chmp1b1Q99LU0 Slc27a2-201ENSMUST00000061491 2918 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Chmp1b1Q99LU0 Ntsr1-202ENSMUST00000170448 2594 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Chmp1b1Q99LU0 Rin2-202ENSMUST00000110005 4641 ntAPPRIS ALT2 TSL 5 BASIC11.8□□□□□ -0.52
Chmp1b1Q99LU0 Etf1-201ENSMUST00000025218 3709 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Chmp1b1Q99LU0 Sun2-202ENSMUST00000089311 3709 ntAPPRIS P3 TSL 1 (best) BASIC11.8□□□□□ -0.52
Chmp1b1Q99LU0 Satb2-205ENSMUST00000177424 4694 ntTSL 5 BASIC11.8□□□□□ -0.52
Chmp1b1Q99LU0 Fgd2-201ENSMUST00000024810 2612 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Chmp1b1Q99LU0 AC122228.1-201ENSMUST00000223113 2057 ntTSL 5 BASIC11.8□□□□□ -0.52
Chmp1b1Q99LU0 Cdk5rap3-201ENSMUST00000103152 2250 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Chmp1b1Q99LU0 Eps8l3-201ENSMUST00000037375 2271 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Chmp1b1Q99LU0 Trpv4-204ENSMUST00000112222 2475 ntTSL 5 BASIC11.8□□□□□ -0.52
Chmp1b1Q99LU0 Sfxn3-203ENSMUST00000111954 2867 ntTSL 5 BASIC11.8□□□□□ -0.52
Chmp1b1Q99LU0 Tbl2-204ENSMUST00000153183 7488 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Chmp1b1Q99LU0 Gm33543-203ENSMUST00000211096 1722 ntAPPRIS P5 TSL 5 BASIC11.8□□□□□ -0.52
Chmp1b1Q99LU0 Shroom1-202ENSMUST00000093114 2886 ntTSL 2 BASIC11.8□□□□□ -0.52
Chmp1b1Q99LU0 Itga4-201ENSMUST00000099972 9767 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Chmp1b1Q99LU0 Ctps2-206ENSMUST00000112303 3289 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Chmp1b1Q99LU0 Zkscan3-207ENSMUST00000223831 2101 ntBASIC11.8□□□□□ -0.52
Chmp1b1Q99LU0 Adgrl3-201ENSMUST00000036068 6203 ntAPPRIS ALT2 TSL 5 BASIC11.8□□□□□ -0.52
Chmp1b1Q99LU0 Adgrl3-202ENSMUST00000072521 6203 ntAPPRIS P3 TSL 5 BASIC11.8□□□□□ -0.52
Chmp1b1Q99LU0 Cpt1c-206ENSMUST00000212836 2716 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Retrieved 100 of 76,532 protein–RNA pairs in 48.4 ms