Protein–RNA interactions for Protein: Q99J95

Cdk9, Cyclin-dependent kinase 9, mousemouse

Predictions only

Length 372 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdk9Q99J95 Tufm-202ENSMUST00000106392 1754 ntTSL 2 BASIC12.57□□□□□ -0.4
Cdk9Q99J95 Mafg-203ENSMUST00000106181 840 ntAPPRIS P1 TSL 3 BASIC12.57□□□□□ -0.4
Cdk9Q99J95 Prrx2-202ENSMUST00000113592 1070 ntAPPRIS ALT2 TSL 1 (best) BASIC12.57□□□□□ -0.4
Cdk9Q99J95 Gm15491-201ENSMUST00000133963 751 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Cdk9Q99J95 1700095B10Rik-201ENSMUST00000182349 978 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Cdk9Q99J95 Gm28631-201ENSMUST00000190740 334 ntBASIC12.57□□□□□ -0.4
Cdk9Q99J95 Gm38114-201ENSMUST00000191877 1232 ntBASIC12.57□□□□□ -0.4
Cdk9Q99J95 Pex1-208ENSMUST00000195894 528 ntTSL 3 BASIC12.57□□□□□ -0.4
Cdk9Q99J95 Gm35549-203ENSMUST00000204619 644 ntAPPRIS P1 TSL 5 BASIC12.57□□□□□ -0.4
Cdk9Q99J95 Gm8227-201ENSMUST00000223306 571 ntBASIC12.57□□□□□ -0.4
Cdk9Q99J95 Rps11-201ENSMUST00000003521 661 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Cdk9Q99J95 4921522P10Rik-201ENSMUST00000048606 2101 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Cdk9Q99J95 Med8-203ENSMUST00000084319 1134 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Cdk9Q99J95 Rac1-201ENSMUST00000080537 4159 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Cdk9Q99J95 Slc36a1-202ENSMUST00000108867 1611 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Cdk9Q99J95 Itgal-202ENSMUST00000117762 5222 ntAPPRIS ALT2 TSL 1 (best) BASIC12.57□□□□□ -0.4
Cdk9Q99J95 Vmac-202ENSMUST00000164907 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC12.57□□□□□ -0.4
Cdk9Q99J95 Rab11a-208ENSMUST00000172298 2336 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Cdk9Q99J95 Myo7a-203ENSMUST00000107127 6806 ntAPPRIS P3 TSL 5 BASIC12.57□□□□□ -0.4
Cdk9Q99J95 Jak1-201ENSMUST00000102781 4906 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Cdk9Q99J95 Gng7-203ENSMUST00000117805 3382 ntAPPRIS ALT1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Cdk9Q99J95 Tpra1-219ENSMUST00000203345 3359 ntTSL 5 BASIC12.57□□□□□ -0.4
Cdk9Q99J95 Dis3l-208ENSMUST00000168844 3575 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Cdk9Q99J95 Kdm2b-203ENSMUST00000086200 4999 ntAPPRIS ALT2 TSL 5 BASIC12.57□□□□□ -0.4
Cdk9Q99J95 Nfatc4-202ENSMUST00000172271 3775 ntAPPRIS ALT2 TSL 1 (best) BASIC12.57□□□□□ -0.4
Cdk9Q99J95 Tmem56-204ENSMUST00000135818 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC12.57□□□□□ -0.4
Cdk9Q99J95 Atp6v0a1-210ENSMUST00000168757 3967 ntAPPRIS ALT1 TSL 5 BASIC12.57□□□□□ -0.4
Cdk9Q99J95 Gucy2e-203ENSMUST00000108665 3645 ntAPPRIS P1 TSL 5 BASIC12.57□□□□□ -0.4
Cdk9Q99J95 Dnmbp-201ENSMUST00000026209 4882 ntAPPRIS P2 TSL 2 BASIC12.57□□□□□ -0.4
Cdk9Q99J95 Nol4l-202ENSMUST00000109784 5610 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Cdk9Q99J95 Igsf23-204ENSMUST00000208974 1850 ntAPPRIS ALT2 TSL 1 (best) BASIC12.57□□□□□ -0.4
Cdk9Q99J95 Lsamp-208ENSMUST00000189358 2766 ntTSL 5 BASIC12.57□□□□□ -0.4
Cdk9Q99J95 Pdzk1-201ENSMUST00000058865 2406 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Cdk9Q99J95 Shank2-202ENSMUST00000105900 8169 ntTSL 5 BASIC12.57□□□□□ -0.4
Cdk9Q99J95 Fam206a-201ENSMUST00000045368 4275 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Cdk9Q99J95 Syvn1-207ENSMUST00000156550 3363 ntAPPRIS ALT2 TSL 5 BASIC12.56□□□□□ -0.4
Cdk9Q99J95 Zfp526-201ENSMUST00000055604 3380 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Cdk9Q99J95 Gm12132-201ENSMUST00000130945 1391 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Cdk9Q99J95 Grip2-201ENSMUST00000159684 3006 ntAPPRIS ALT2 TSL 5 BASIC12.56□□□□□ -0.4
Cdk9Q99J95 Zbtb24-205ENSMUST00000216656 2476 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Cdk9Q99J95 Crybg3-201ENSMUST00000044604 5231 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Cdk9Q99J95 AC126257.2-201ENSMUST00000215507 2300 ntBASIC12.56□□□□□ -0.4
Cdk9Q99J95 Pitpnm2-201ENSMUST00000086123 6620 ntAPPRIS P3 TSL 1 (best) BASIC12.56□□□□□ -0.4
Cdk9Q99J95 Grpel2-201ENSMUST00000062991 4030 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Cdk9Q99J95 Itgb4-204ENSMUST00000106460 5919 ntAPPRIS ALT2 TSL 5 BASIC12.56□□□□□ -0.4
Cdk9Q99J95 Pipox-201ENSMUST00000017597 1998 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Cdk9Q99J95 Gm14243-201ENSMUST00000131401 2172 ntTSL 2 BASIC12.56□□□□□ -0.4
Cdk9Q99J95 Fzd4-201ENSMUST00000058755 6720 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Cdk9Q99J95 Olfr1344-202ENSMUST00000218906 2590 ntAPPRIS P1 TSL 5 BASIC12.56□□□□□ -0.4
Cdk9Q99J95 Cpq-207ENSMUST00000228916 1842 ntAPPRIS P1 BASIC12.56□□□□□ -0.4
Cdk9Q99J95 Tmem215-201ENSMUST00000049655 4733 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Cdk9Q99J95 Slc6a13-201ENSMUST00000064580 2234 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Cdk9Q99J95 Ptprm-203ENSMUST00000224091 3773 ntBASIC12.56□□□□□ -0.4
Cdk9Q99J95 Tmcc3-204ENSMUST00000121471 2614 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Cdk9Q99J95 Zbtb44-201ENSMUST00000115222 8861 ntTSL 5 BASIC12.56□□□□□ -0.4
Cdk9Q99J95 Dlc1-201ENSMUST00000033923 6159 ntAPPRIS P3 TSL 1 (best) BASIC12.56□□□□□ -0.4
Cdk9Q99J95 Trav3d-3-201ENSMUST00000103599 276 ntAPPRIS P1 BASIC12.56□□□□□ -0.4
Cdk9Q99J95 Trav3n-3-201ENSMUST00000103625 276 ntAPPRIS P1 BASIC12.56□□□□□ -0.4
Cdk9Q99J95 Gm5303-201ENSMUST00000117943 1252 ntBASIC12.56□□□□□ -0.4
Cdk9Q99J95 Trav3-3-202ENSMUST00000183835 276 ntAPPRIS P1 BASIC12.56□□□□□ -0.4
Cdk9Q99J95 Ccdc159-204ENSMUST00000216710 1126 ntAPPRIS ALT2 TSL 5 BASIC12.56□□□□□ -0.4
Cdk9Q99J95 Gm34466-201ENSMUST00000222218 505 ntTSL 2 BASIC12.56□□□□□ -0.4
Cdk9Q99J95 Ins1-201ENSMUST00000039652 1016 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Cdk9Q99J95 Ppil3-201ENSMUST00000081677 896 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Cdk9Q99J95 Tex13c3-201ENSMUST00000089246 876 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Cdk9Q99J95 Slc4a3-202ENSMUST00000124341 7182 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Cdk9Q99J95 Pde9a-201ENSMUST00000047168 2065 ntAPPRIS P2 TSL 1 (best) BASIC12.56□□□□□ -0.4
Cdk9Q99J95 G6pdx-201ENSMUST00000004327 2652 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Cdk9Q99J95 Flnc-202ENSMUST00000101617 8939 ntAPPRIS ALT1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Cdk9Q99J95 Rasgef1b-203ENSMUST00000146396 3339 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Cdk9Q99J95 Ormdl1-201ENSMUST00000027266 1910 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Cdk9Q99J95 Marco-201ENSMUST00000027639 1925 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Cdk9Q99J95 Mrap2-201ENSMUST00000049457 1931 ntAPPRIS P1 TSL 3 BASIC12.56□□□□□ -0.4
Cdk9Q99J95 Mapk3-203ENSMUST00000091328 1716 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Cdk9Q99J95 Fn1-216ENSMUST00000189821 7410 ntAPPRIS ALT2 TSL 1 (best) BASIC12.56□□□□□ -0.4
Cdk9Q99J95 Ccdc106-202ENSMUST00000108571 1318 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Cdk9Q99J95 Gm11978-202ENSMUST00000127510 1303 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Cdk9Q99J95 Mirg-208ENSMUST00000182499 3187 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Cdk9Q99J95 Epm2aip1-202ENSMUST00000135807 4245 ntAPPRIS P1 TSL 2 BASIC12.56□□□□□ -0.4
Cdk9Q99J95 Gtf2e2-201ENSMUST00000167264 1566 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Cdk9Q99J95 Sh3tc1-201ENSMUST00000070203 4549 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Cdk9Q99J95 Rbm6-207ENSMUST00000183032 3716 ntAPPRIS ALT2 TSL 1 (best) BASIC12.55□□□□□ -0.4
Cdk9Q99J95 Zcchc18-202ENSMUST00000101227 2045 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Cdk9Q99J95 5430419D17Rik-201ENSMUST00000050586 2928 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Cdk9Q99J95 Stra6-202ENSMUST00000085677 2725 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Cdk9Q99J95 Eci2-211ENSMUST00000171229 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC12.55□□□□□ -0.4
Cdk9Q99J95 Sparc-201ENSMUST00000018737 2300 ntAPPRIS P3 TSL 1 (best) BASIC12.55□□□□□ -0.4
Cdk9Q99J95 Pex1-201ENSMUST00000006061 4433 ntAPPRIS P3 TSL 1 (best) BASIC12.55□□□□□ -0.4
Cdk9Q99J95 Mcf2l-203ENSMUST00000110866 5108 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Cdk9Q99J95 Cers6-201ENSMUST00000028426 7038 ntAPPRIS P3 TSL 1 (best) BASIC12.55□□□□□ -0.4
Cdk9Q99J95 Cacna1g-210ENSMUST00000107792 7981 ntAPPRIS ALT2 TSL 5 BASIC12.55□□□□□ -0.4
Cdk9Q99J95 Tmem176b-201ENSMUST00000101429 1238 ntAPPRIS P1 TSL 5 BASIC12.55□□□□□ -0.4
Cdk9Q99J95 Icam4-201ENSMUST00000001040 971 ntAPPRIS P2 TSL 1 (best) BASIC12.55□□□□□ -0.4
Cdk9Q99J95 Ppcs-202ENSMUST00000106316 954 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Cdk9Q99J95 Gm20521-201ENSMUST00000134077 1245 ntAPPRIS P1 TSL 5 BASIC12.55□□□□□ -0.4
Cdk9Q99J95 4933427I22Rik-201ENSMUST00000138672 393 ntTSL 3 BASIC12.55□□□□□ -0.4
Cdk9Q99J95 1600025M17Rik-202ENSMUST00000151426 547 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Cdk9Q99J95 Gm26602-201ENSMUST00000181321 285 ntAPPRIS P1 BASIC12.55□□□□□ -0.4
Cdk9Q99J95 Hcfc1r1-201ENSMUST00000024697 946 ntAPPRIS P2 TSL 1 (best) BASIC12.55□□□□□ -0.4
Cdk9Q99J95 Cyct-201ENSMUST00000028430 655 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Retrieved 100 of 76,532 protein–RNA pairs in 662.1 ms