Protein–RNA interactions for Protein: Q99J36

Thumpd1, THUMP domain-containing protein 1, mousemouse

Known RBP Predictions only

Length 350 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Thumpd1Q99J36 Serpinb13-201ENSMUST00000027564 1607 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Thumpd1Q99J36 Grm1-201ENSMUST00000044306 6930 ntAPPRIS P3 TSL 1 (best) BASIC11.1□□□□□ -0.63
Thumpd1Q99J36 Chrdl1-202ENSMUST00000074660 4096 ntAPPRIS P3 TSL 1 (best) BASIC11.1□□□□□ -0.63
Thumpd1Q99J36 Lsp1-211ENSMUST00000149521 1910 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
Thumpd1Q99J36 Treh-201ENSMUST00000034609 2048 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Thumpd1Q99J36 Rgs20-203ENSMUST00000119256 883 ntAPPRIS ALT2 TSL 3 BASIC11.1□□□□□ -0.63
Thumpd1Q99J36 Gnb2-209ENSMUST00000143495 1285 ntTSL 5 BASIC11.1□□□□□ -0.63
Thumpd1Q99J36 Gm10863-205ENSMUST00000148028 905 ntTSL 3 BASIC11.1□□□□□ -0.63
Thumpd1Q99J36 Gm16296-201ENSMUST00000159905 325 ntBASIC11.1□□□□□ -0.63
Thumpd1Q99J36 Gltpd2-202ENSMUST00000179000 794 ntAPPRIS ALT2 TSL 2 BASIC11.1□□□□□ -0.63
Thumpd1Q99J36 Neurl3-202ENSMUST00000188666 1206 ntTSL 5 BASIC11.1□□□□□ -0.63
Thumpd1Q99J36 Gm44882-201ENSMUST00000205702 802 ntBASIC11.1□□□□□ -0.63
Thumpd1Q99J36 Fam168a-206ENSMUST00000208013 1129 ntTSL 5 BASIC11.1□□□□□ -0.63
Thumpd1Q99J36 Olfr1423-201ENSMUST00000087831 933 ntAPPRIS P1 BASIC11.1□□□□□ -0.63
Thumpd1Q99J36 Tbx4-203ENSMUST00000108047 3153 ntAPPRIS P1 TSL 5 BASIC11.1□□□□□ -0.63
Thumpd1Q99J36 Tmem80-204ENSMUST00000128906 1387 ntTSL 2 BASIC11.1□□□□□ -0.63
Thumpd1Q99J36 Clec10a-209ENSMUST00000178945 2332 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
Thumpd1Q99J36 Epm2aip1-202ENSMUST00000135807 4245 ntAPPRIS P1 TSL 2 BASIC11.1□□□□□ -0.63
Thumpd1Q99J36 Dip2c-201ENSMUST00000166299 4822 ntTSL 5 BASIC11.1□□□□□ -0.63
Thumpd1Q99J36 Zfp362-202ENSMUST00000106072 2812 ntAPPRIS P1 TSL 5 BASIC11.1□□□□□ -0.63
Thumpd1Q99J36 Gm37849-201ENSMUST00000194722 1881 ntBASIC11.1□□□□□ -0.63
Thumpd1Q99J36 Ikbip-201ENSMUST00000020149 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC11.1□□□□□ -0.63
Thumpd1Q99J36 Gimap5-201ENSMUST00000055558 1953 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Thumpd1Q99J36 Gm42372-201ENSMUST00000206129 5067 ntAPPRIS P1 BASIC11.1□□□□□ -0.63
Thumpd1Q99J36 Fut1-201ENSMUST00000008605 2580 ntAPPRIS P3 TSL 1 (best) BASIC11.1□□□□□ -0.63
Thumpd1Q99J36 Mroh7-201ENSMUST00000106770 4346 ntAPPRIS P1 TSL 5 BASIC11.1□□□□□ -0.63
Thumpd1Q99J36 Dlc1-201ENSMUST00000033923 6159 ntAPPRIS P3 TSL 1 (best) BASIC11.1□□□□□ -0.63
Thumpd1Q99J36 Fgf12-201ENSMUST00000100024 3065 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Thumpd1Q99J36 Prss22-201ENSMUST00000041649 1323 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Thumpd1Q99J36 Klhl3-202ENSMUST00000160860 7149 ntAPPRIS P1 TSL 5 BASIC11.09□□□□□ -0.63
Thumpd1Q99J36 Pcdhgb5-201ENSMUST00000192535 4670 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Thumpd1Q99J36 Plrg1-202ENSMUST00000122128 1608 ntTSL 5 BASIC11.09□□□□□ -0.63
Thumpd1Q99J36 Pop4-201ENSMUST00000032585 2113 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Thumpd1Q99J36 Spata20-201ENSMUST00000041705 2627 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Thumpd1Q99J36 Gcn1l1-201ENSMUST00000064454 8555 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Thumpd1Q99J36 Epb41l2-204ENSMUST00000217929 3621 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
Thumpd1Q99J36 Pcdhgb7-201ENSMUST00000194928 4713 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Thumpd1Q99J36 Glis3-209ENSMUST00000162022 7514 ntAPPRIS P2 TSL 1 (best) BASIC11.09□□□□□ -0.63
Thumpd1Q99J36 Klf11-201ENSMUST00000020982 4086 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Thumpd1Q99J36 Gtf2ird1-207ENSMUST00000111245 3299 ntAPPRIS ALT2 TSL 1 (best) BASIC11.09□□□□□ -0.63
Thumpd1Q99J36 Rnf6-201ENSMUST00000067837 2388 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Thumpd1Q99J36 Gm10851-201ENSMUST00000192087 1685 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
Thumpd1Q99J36 Trav13d-2-201ENSMUST00000103596 264 ntAPPRIS P1 BASIC11.09□□□□□ -0.63
Thumpd1Q99J36 Trav13n-2-201ENSMUST00000103622 264 ntAPPRIS P1 BASIC11.09□□□□□ -0.63
Thumpd1Q99J36 Gm11773-201ENSMUST00000138256 497 ntTSL 2 BASIC11.09□□□□□ -0.63
Thumpd1Q99J36 Spata3-210ENSMUST00000153247 884 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
Thumpd1Q99J36 Gm14286-201ENSMUST00000155674 464 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
Thumpd1Q99J36 Ppt2-202ENSMUST00000166040 1139 ntAPPRIS P1 TSL 3 BASIC11.09□□□□□ -0.63
Thumpd1Q99J36 Lamtor3-201ENSMUST00000168345 1295 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Thumpd1Q99J36 Mad2l1bp-201ENSMUST00000171172 1269 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Thumpd1Q99J36 6430590A07Rik-201ENSMUST00000181813 1032 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
Thumpd1Q99J36 Gm28139-201ENSMUST00000189480 643 ntTSL 5 BASIC11.09□□□□□ -0.63
Thumpd1Q99J36 Gm24136-201ENSMUST00000083374 165 ntBASIC11.09□□□□□ -0.63
Thumpd1Q99J36 1600017P15Rik-201ENSMUST00000083427 412 ntBASIC11.09□□□□□ -0.63
Thumpd1Q99J36 Als2cl-206ENSMUST00000155014 5150 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Thumpd1Q99J36 Pkp3-201ENSMUST00000066873 2848 ntAPPRIS P3 TSL 1 (best) BASIC11.09□□□□□ -0.63
Thumpd1Q99J36 Gng5-202ENSMUST00000118280 2419 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Thumpd1Q99J36 Axl-202ENSMUST00000085948 3899 ntAPPRIS ALT2 TSL 1 (best) BASIC11.09□□□□□ -0.63
Thumpd1Q99J36 Gm15594-201ENSMUST00000137958 2215 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
Thumpd1Q99J36 Ugt1a2-201ENSMUST00000049289 2211 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Thumpd1Q99J36 Kcnip4-207ENSMUST00000176191 2116 ntTSL 5 BASIC11.09□□□□□ -0.63
Thumpd1Q99J36 Gucy1a3-204ENSMUST00000193924 4710 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Thumpd1Q99J36 A630075F10Rik-201ENSMUST00000180895 1913 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
Thumpd1Q99J36 Alg13-202ENSMUST00000070801 1802 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Thumpd1Q99J36 Cd40-201ENSMUST00000017799 2986 ntAPPRIS P4 TSL 1 (best) BASIC11.09□□□□□ -0.63
Thumpd1Q99J36 Traf3ip2-201ENSMUST00000019987 2867 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Thumpd1Q99J36 A430057M04Rik-201ENSMUST00000169054 3835 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
Thumpd1Q99J36 Tle1-201ENSMUST00000030095 2569 ntTSL 5 BASIC11.09□□□□□ -0.63
Thumpd1Q99J36 Gtf2ird1-209ENSMUST00000171794 3524 ntAPPRIS ALT2 TSL 1 (best) BASIC11.09□□□□□ -0.63
Thumpd1Q99J36 Mroh1-201ENSMUST00000092595 5111 ntAPPRIS ALT2 TSL 1 (best) BASIC11.09□□□□□ -0.63
Thumpd1Q99J36 Mtf2-201ENSMUST00000081567 4060 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Thumpd1Q99J36 Gm44260-201ENSMUST00000204946 2094 ntBASIC11.08□□□□□ -0.63
Thumpd1Q99J36 Trappc5-202ENSMUST00000207787 4411 ntAPPRIS P1 BASIC11.08□□□□□ -0.63
Thumpd1Q99J36 Frmpd2-203ENSMUST00000208577 5192 ntAPPRIS P1 TSL 5 BASIC11.08□□□□□ -0.63
Thumpd1Q99J36 Mylip-202ENSMUST00000222178 1954 ntTSL 1 (best) BASIC11.08□□□□□ -0.64
Thumpd1Q99J36 Grid2ip-201ENSMUST00000010969 3459 ntTSL 1 (best) BASIC11.08□□□□□ -0.64
Thumpd1Q99J36 Amotl2-211ENSMUST00000153965 4222 ntAPPRIS ALT2 TSL 1 (best) BASIC11.08□□□□□ -0.64
Thumpd1Q99J36 Siglec1-202ENSMUST00000110226 1861 ntTSL 1 (best) BASIC11.08□□□□□ -0.64
Thumpd1Q99J36 Gm29050-201ENSMUST00000190732 2528 ntTSL 1 (best) BASIC11.08□□□□□ -0.64
Thumpd1Q99J36 Wdr89-201ENSMUST00000062370 2979 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Thumpd1Q99J36 Ppnr-201ENSMUST00000190974 3525 ntTSL 1 (best) BASIC11.08□□□□□ -0.64
Thumpd1Q99J36 Pcdhga4-201ENSMUST00000194418 4727 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Thumpd1Q99J36 Myo9b-202ENSMUST00000168839 7102 ntAPPRIS ALT2 TSL 5 BASIC11.08□□□□□ -0.64
Thumpd1Q99J36 Pex3-201ENSMUST00000019945 2129 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Thumpd1Q99J36 Ttc4-201ENSMUST00000026480 2121 ntAPPRIS P2 TSL 1 (best) BASIC11.08□□□□□ -0.64
Thumpd1Q99J36 Zmynd8-220ENSMUST00000170272 5076 ntAPPRIS ALT2 TSL 1 (best) BASIC11.08□□□□□ -0.64
Thumpd1Q99J36 Fuca2-201ENSMUST00000060212 2007 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Thumpd1Q99J36 Zfp426-202ENSMUST00000115562 3557 ntAPPRIS P3 TSL 1 (best) BASIC11.08□□□□□ -0.64
Thumpd1Q99J36 Bean1-206ENSMUST00000213077 1373 ntAPPRIS ALT2 TSL 3 BASIC11.08□□□□□ -0.64
Thumpd1Q99J36 Pnoc-202ENSMUST00000224594 1388 ntAPPRIS ALT2 BASIC11.08□□□□□ -0.64
Thumpd1Q99J36 Ercc4-201ENSMUST00000023206 3480 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Thumpd1Q99J36 Map4-205ENSMUST00000165876 5573 ntAPPRIS ALT2 TSL 5 BASIC11.08□□□□□ -0.64
Thumpd1Q99J36 Sema6d-207ENSMUST00000103240 4372 ntAPPRIS ALT1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Thumpd1Q99J36 Dram1-201ENSMUST00000020249 2807 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Thumpd1Q99J36 Mafg-203ENSMUST00000106181 840 ntAPPRIS P1 TSL 3 BASIC11.08□□□□□ -0.64
Thumpd1Q99J36 Cpsf4l-203ENSMUST00000106617 1123 ntTSL 1 (best) BASIC11.08□□□□□ -0.64
Thumpd1Q99J36 Gm8805-201ENSMUST00000117848 313 ntBASIC11.08□□□□□ -0.64
Thumpd1Q99J36 Ntpcr-205ENSMUST00000143504 520 ntTSL 5 BASIC11.08□□□□□ -0.64
Thumpd1Q99J36 Rmrp-201ENSMUST00000157463 271 ntBASIC11.08□□□□□ -0.64
Thumpd1Q99J36 Ppp3cb-202ENSMUST00000159027 3831 ntAPPRIS P3 TSL 1 (best) BASIC11.08□□□□□ -0.64
Retrieved 100 of 76,532 protein–RNA pairs in 34 ms