Protein–RNA interactions for Protein: Q96PX6

CCDC85A, Coiled-coil domain-containing protein 85A, humanhuman

Predicted RBP Predictions only

Length 553 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC85AQ96PX6 EGLN2-207ENST00000593726 2821 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
CCDC85AQ96PX6 KCNJ2-202ENST00000535240 1685 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
CCDC85AQ96PX6 PHYH-203ENST00000396920 1829 ntTSL 5 BASIC19.21■□□□□ 0.67
CCDC85AQ96PX6 TMTC2-201ENST00000321196 5681 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
CCDC85AQ96PX6 REPS1-201ENST00000258062 3161 ntAPPRIS P3 TSL 1 (best) BASIC19.21■□□□□ 0.67
CCDC85AQ96PX6 GBA2-203ENST00000378103 3611 ntAPPRIS P3 TSL 1 (best) BASIC19.21■□□□□ 0.67
CCDC85AQ96PX6 AHNAK-201ENST00000257247 1024 ntAPPRIS ALT2 TSL 1 (best) BASIC19.21■□□□□ 0.67
CCDC85AQ96PX6 CYTL1-201ENST00000307746 1003 ntAPPRIS P2 TSL 1 (best) BASIC19.21■□□□□ 0.67
CCDC85AQ96PX6 TPO-206ENST00000382269 1155 ntTSL 5 BASIC19.21■□□□□ 0.67
CCDC85AQ96PX6 NUDT1-206ENST00000397049 714 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
CCDC85AQ96PX6 KLF2P2-201ENST00000416807 1039 ntBASIC19.21■□□□□ 0.67
CCDC85AQ96PX6 CNN2P8-201ENST00000421872 913 ntBASIC19.21■□□□□ 0.67
CCDC85AQ96PX6 AL139289.2-201ENST00000424948 661 ntTSL 2 BASIC19.21■□□□□ 0.67
CCDC85AQ96PX6 ARHGEF26-AS1-201ENST00000467912 628 ntTSL 3 BASIC19.21■□□□□ 0.67
CCDC85AQ96PX6 FAM8A2P-201ENST00000528813 1142 ntBASIC19.21■□□□□ 0.67
CCDC85AQ96PX6 NAALADL1-208ENST00000528884 973 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
CCDC85AQ96PX6 C17orf49-209ENST00000552775 779 ntTSL 5 BASIC19.21■□□□□ 0.67
CCDC85AQ96PX6 GSTZ1-219ENST00000557639 873 ntTSL 2 BASIC19.21■□□□□ 0.67
CCDC85AQ96PX6 AP002360.2-202ENST00000572035 738 ntTSL 3 BASIC19.21■□□□□ 0.67
CCDC85AQ96PX6 EGLN2-209ENST00000594140 991 ntTSL 2 BASIC19.21■□□□□ 0.67
CCDC85AQ96PX6 FOLH1-202ENST00000340334 2697 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
CCDC85AQ96PX6 AC092850.2-201ENST00000623821 2697 ntBASIC19.21■□□□□ 0.67
CCDC85AQ96PX6 HS6ST2-201ENST00000370833 1938 ntTSL 5 BASIC19.21■□□□□ 0.67
CCDC85AQ96PX6 EIF4A1-201ENST00000293831 1756 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
CCDC85AQ96PX6 CD300A-205ENST00000577511 1459 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
CCDC85AQ96PX6 FOXO3-201ENST00000343882 7308 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
CCDC85AQ96PX6 REPS1-208ENST00000450536 4537 ntAPPRIS ALT1 TSL 1 (best) BASIC19.21■□□□□ 0.67
CCDC85AQ96PX6 PPFIBP2-201ENST00000299492 3557 ntAPPRIS P3 TSL 1 (best) BASIC19.21■□□□□ 0.66
CCDC85AQ96PX6 PRRG1-203ENST00000463135 1663 ntTSL 2 BASIC19.2■□□□□ 0.66
CCDC85AQ96PX6 AC092198.1-201ENST00000447651 2691 ntTSL 2 BASIC19.2■□□□□ 0.66
CCDC85AQ96PX6 RRP1-207ENST00000497547 3022 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
CCDC85AQ96PX6 ADRB1-201ENST00000369295 2853 ntAPPRIS P1 BASIC19.2■□□□□ 0.66
CCDC85AQ96PX6 SGCZ-201ENST00000382080 2234 ntAPPRIS P1 TSL 5 BASIC19.2■□□□□ 0.66
CCDC85AQ96PX6 CCDC51-204ENST00000442740 1554 ntTSL 3 BASIC19.2■□□□□ 0.66
CCDC85AQ96PX6 TIMM44-201ENST00000270538 2075 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
CCDC85AQ96PX6 SCYL1-206ENST00000525364 2584 ntTSL 5 BASIC19.2■□□□□ 0.66
CCDC85AQ96PX6 PIGP-207ENST00000464265 3437 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
CCDC85AQ96PX6 ARL6IP1-201ENST00000304414 2409 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
CCDC85AQ96PX6 RFPL2-203ENST00000400237 2407 ntAPPRIS P3 TSL 2 BASIC19.2■□□□□ 0.66
CCDC85AQ96PX6 RAB41-201ENST00000276066 1071 ntAPPRIS P2 TSL 1 (best) BASIC19.2■□□□□ 0.66
CCDC85AQ96PX6 DMAC2-202ENST00000301183 1134 ntTSL 2 BASIC19.2■□□□□ 0.66
CCDC85AQ96PX6 CDK2-202ENST00000354056 1260 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
CCDC85AQ96PX6 HIST3H2A-201ENST00000366695 895 ntAPPRIS P1 BASIC19.2■□□□□ 0.66
CCDC85AQ96PX6 RAB41-202ENST00000374473 1074 ntAPPRIS ALT2 TSL 5 BASIC19.2■□□□□ 0.66
CCDC85AQ96PX6 NDUFA3-203ENST00000391763 338 ntTSL 2 BASIC19.2■□□□□ 0.66
CCDC85AQ96PX6 ATP5J-205ENST00000400094 589 ntAPPRIS P1 TSL 2 BASIC19.2■□□□□ 0.66
CCDC85AQ96PX6 P3H2-AS1-201ENST00000412203 730 ntTSL 5 BASIC19.2■□□□□ 0.66
CCDC85AQ96PX6 AC092614.1-201ENST00000419640 909 ntTSL 3 BASIC19.2■□□□□ 0.66
CCDC85AQ96PX6 AC128709.1-201ENST00000445908 600 ntTSL 3 BASIC19.2■□□□□ 0.66
CCDC85AQ96PX6 SNHG12-210ENST00000483436 682 ntTSL 3 BASIC19.2■□□□□ 0.66
CCDC85AQ96PX6 CLRN2-201ENST00000511148 823 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
CCDC85AQ96PX6 AC020659.2-202ENST00000512295 513 ntTSL 2 BASIC19.2■□□□□ 0.66
CCDC85AQ96PX6 RAB40B-202ENST00000538809 704 ntTSL 2 BASIC19.2■□□□□ 0.66
CCDC85AQ96PX6 AC003070.2-201ENST00000589730 386 ntTSL 3 BASIC19.2■□□□□ 0.66
CCDC85AQ96PX6 HOXD3-201ENST00000249440 2303 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
CCDC85AQ96PX6 SLC2A14-202ENST00000396589 2335 ntAPPRIS P3 TSL 1 (best) BASIC19.2■□□□□ 0.66
CCDC85AQ96PX6 MAP4K1-208ENST00000589130 2654 ntTSL 5 BASIC19.2■□□□□ 0.66
CCDC85AQ96PX6 SLC20A1-201ENST00000272542 3381 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
CCDC85AQ96PX6 CD8A-201ENST00000283635 2873 ntAPPRIS P4 TSL 1 (best) BASIC19.2■□□□□ 0.66
CCDC85AQ96PX6 AC005064.1-201ENST00000422488 2725 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
CCDC85AQ96PX6 FAM151A-201ENST00000302250 2005 ntAPPRIS P2 TSL 1 (best) BASIC19.2■□□□□ 0.66
CCDC85AQ96PX6 SHTN1-202ENST00000355371 5361 ntAPPRIS ALT1 TSL 2 BASIC19.2■□□□□ 0.66
CCDC85AQ96PX6 FAM83G-201ENST00000345041 2929 ntAPPRIS P1 TSL 5 BASIC19.2■□□□□ 0.66
CCDC85AQ96PX6 ANXA8L1-208ENST00000622769 1861 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
CCDC85AQ96PX6 SIX6-201ENST00000327720 2787 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
CCDC85AQ96PX6 NEO1-201ENST00000261908 7088 ntAPPRIS P3 TSL 1 (best) BASIC19.2■□□□□ 0.66
CCDC85AQ96PX6 WDR74-205ENST00000525752 1724 ntTSL 5 BASIC19.2■□□□□ 0.66
CCDC85AQ96PX6 NTRK2-207ENST00000376214 5608 ntAPPRIS P3 TSL 5 BASIC19.19■□□□□ 0.66
CCDC85AQ96PX6 AC084364.1-201ENST00000551967 1556 ntBASIC19.19■□□□□ 0.66
CCDC85AQ96PX6 CD34-202ENST00000356522 2874 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
CCDC85AQ96PX6 AC009053.1-201ENST00000566802 2320 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
CCDC85AQ96PX6 ZNF18-204ENST00000580306 2330 ntAPPRIS P3 TSL 2 BASIC19.19■□□□□ 0.66
CCDC85AQ96PX6 HDAC5-201ENST00000225983 5326 ntAPPRIS P3 TSL 5 BASIC19.19■□□□□ 0.66
CCDC85AQ96PX6 AMBP-201ENST00000265132 1434 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
CCDC85AQ96PX6 TMPO-AS1-202ENST00000548760 3357 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
CCDC85AQ96PX6 PLEKHA4-202ENST00000355496 2614 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
CCDC85AQ96PX6 SPDYE7P-201ENST00000355920 1064 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
CCDC85AQ96PX6 DUSP23-202ENST00000368108 694 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
CCDC85AQ96PX6 CRYAA-203ENST00000398133 600 ntTSL 3 BASIC19.19■□□□□ 0.66
CCDC85AQ96PX6 AC018467.1-201ENST00000421581 717 ntTSL 5 BASIC19.19■□□□□ 0.66
CCDC85AQ96PX6 LARGE-AS1-202ENST00000424291 1065 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
CCDC85AQ96PX6 AHRR-211ENST00000515206 462 ntTSL 5 BASIC19.19■□□□□ 0.66
CCDC85AQ96PX6 ECM1P1-201ENST00000604092 1279 ntBASIC19.19■□□□□ 0.66
CCDC85AQ96PX6 FP236240.1-202ENST00000624019 601 ntTSL 3 BASIC19.19■□□□□ 0.66
CCDC85AQ96PX6 DOK3-203ENST00000377112 1884 ntTSL 2 BASIC19.19■□□□□ 0.66
CCDC85AQ96PX6 ASCL1-201ENST00000266744 2472 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
CCDC85AQ96PX6 AC008894.3-201ENST00000624324 3103 ntBASIC19.19■□□□□ 0.66
CCDC85AQ96PX6 KIAA1586-201ENST00000370733 2933 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
CCDC85AQ96PX6 C11orf49-204ENST00000395460 1916 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
CCDC85AQ96PX6 PRMT2-202ENST00000334494 1334 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
CCDC85AQ96PX6 ZSCAN30-212ENST00000639929 1305 ntTSL 5 BASIC19.19■□□□□ 0.66
CCDC85AQ96PX6 RUNDC3B-202ENST00000338056 4099 ntTSL 2 BASIC19.19■□□□□ 0.66
CCDC85AQ96PX6 GTF2A1L-203ENST00000430487 1575 ntTSL 2 BASIC19.19■□□□□ 0.66
CCDC85AQ96PX6 PIKFYVE-202ENST00000308862 1640 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
CCDC85AQ96PX6 SPIB-201ENST00000270632 1443 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
CCDC85AQ96PX6 FOS-202ENST00000535987 1402 ntTSL 2 BASIC19.18■□□□□ 0.66
CCDC85AQ96PX6 DARS-AS1-209ENST00000594219 1420 ntTSL 5 BASIC19.18■□□□□ 0.66
CCDC85AQ96PX6 BACE1-211ENST00000528053 4083 ntTSL 5 BASIC19.18■□□□□ 0.66
CCDC85AQ96PX6 AC100803.3-201ENST00000606664 2961 ntTSL 5 BASIC19.18■□□□□ 0.66
CCDC85AQ96PX6 LONRF3-203ENST00000422289 2898 ntTSL 2 BASIC19.18■□□□□ 0.66
Retrieved 100 of 98,524 protein–RNA pairs in 43.6 ms