Protein–RNA interactions for Protein: Q91XY2

Pcdhga6, Protocadherin gamma A6, mousemouse

Predictions only

Length 932 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhga6Q91XY2 Sema3f-204ENSMUST00000192727 2383 ntAPPRIS ALT2 TSL 1 (best) BASIC12.47□□□□□ -0.41
Pcdhga6Q91XY2 Ttpa-203ENSMUST00000121491 2862 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
Pcdhga6Q91XY2 Ttyh1-202ENSMUST00000079415 2882 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
Pcdhga6Q91XY2 Sirt2-202ENSMUST00000122915 1828 ntAPPRIS ALT2 TSL 1 (best) BASIC12.47□□□□□ -0.41
Pcdhga6Q91XY2 Inpp4b-215ENSMUST00000217122 4392 ntAPPRIS ALT2 TSL 1 (best) BASIC12.47□□□□□ -0.41
Pcdhga6Q91XY2 Gm11568-201ENSMUST00000107434 1145 ntAPPRIS P1 BASIC12.47□□□□□ -0.41
Pcdhga6Q91XY2 Cdc26-202ENSMUST00000107459 654 ntAPPRIS P1 TSL 2 BASIC12.47□□□□□ -0.41
Pcdhga6Q91XY2 Blvrb-202ENSMUST00000108357 782 ntTSL 2 BASIC12.47□□□□□ -0.41
Pcdhga6Q91XY2 Gm6335-201ENSMUST00000118081 1194 ntBASIC12.47□□□□□ -0.41
Pcdhga6Q91XY2 Rap1a-ps2-201ENSMUST00000118467 559 ntBASIC12.47□□□□□ -0.41
Pcdhga6Q91XY2 Nmb-202ENSMUST00000119428 678 ntAPPRIS ALT2 TSL 2 BASIC12.47□□□□□ -0.41
Pcdhga6Q91XY2 Gm13492-201ENSMUST00000119772 665 ntBASIC12.47□□□□□ -0.41
Pcdhga6Q91XY2 Gm7816-201ENSMUST00000119884 1194 ntBASIC12.47□□□□□ -0.41
Pcdhga6Q91XY2 Gm15542-201ENSMUST00000121585 1194 ntBASIC12.47□□□□□ -0.41
Pcdhga6Q91XY2 Gm8194-201ENSMUST00000159783 859 ntBASIC12.47□□□□□ -0.41
Pcdhga6Q91XY2 Iqcf6-201ENSMUST00000171091 537 ntAPPRIS P1 TSL 5 BASIC12.47□□□□□ -0.41
Pcdhga6Q91XY2 Ighv8-4-201ENSMUST00000178949 294 ntAPPRIS P1 BASIC12.47□□□□□ -0.41
Pcdhga6Q91XY2 1700031P21Rik-203ENSMUST00000191400 466 ntTSL 3 BASIC12.47□□□□□ -0.41
Pcdhga6Q91XY2 Gm18916-201ENSMUST00000198264 1246 ntBASIC12.47□□□□□ -0.41
Pcdhga6Q91XY2 Gm36503-201ENSMUST00000204284 875 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
Pcdhga6Q91XY2 Gm4598-201ENSMUST00000206756 1080 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
Pcdhga6Q91XY2 Gm45765-201ENSMUST00000212027 1035 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
Pcdhga6Q91XY2 CT009486.1-201ENSMUST00000222047 661 ntTSL 3 BASIC12.47□□□□□ -0.41
Pcdhga6Q91XY2 Ufc1-201ENSMUST00000080001 1007 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Pcdhga6Q91XY2 Kiss1r-201ENSMUST00000045529 3163 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Pcdhga6Q91XY2 Ell3-202ENSMUST00000116432 1674 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Pcdhga6Q91XY2 Cyp4f17-201ENSMUST00000165999 1693 ntAPPRIS P1 TSL 5 BASIC12.47□□□□□ -0.41
Pcdhga6Q91XY2 Cd109-201ENSMUST00000093812 5860 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Pcdhga6Q91XY2 Gm42480-201ENSMUST00000198434 2595 ntBASIC12.47□□□□□ -0.41
Pcdhga6Q91XY2 Ahi1-201ENSMUST00000105525 4851 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Pcdhga6Q91XY2 Duox1-201ENSMUST00000099461 5267 ntAPPRIS P1 TSL 2 BASIC12.47□□□□□ -0.41
Pcdhga6Q91XY2 Tcf3-205ENSMUST00000105341 2451 ntAPPRIS ALT2 TSL 5 BASIC12.47□□□□□ -0.41
Pcdhga6Q91XY2 C130026L21Rik-201ENSMUST00000064930 2472 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
Pcdhga6Q91XY2 Ebf3-203ENSMUST00000168203 3724 ntAPPRIS ALT1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Pcdhga6Q91XY2 Rap1gds1-202ENSMUST00000098574 3669 ntAPPRIS P3 TSL 1 (best) BASIC12.47□□□□□ -0.41
Pcdhga6Q91XY2 Nrf1-211ENSMUST00000115212 3584 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
Pcdhga6Q91XY2 Sgk3-201ENSMUST00000097826 2728 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Pcdhga6Q91XY2 Wrap53-201ENSMUST00000048139 1891 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Pcdhga6Q91XY2 Elovl6-202ENSMUST00000197070 2275 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
Pcdhga6Q91XY2 Pfkfb3-212ENSMUST00000170196 2163 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
Pcdhga6Q91XY2 Gne-209ENSMUST00000173234 2149 ntTSL 5 BASIC12.46□□□□□ -0.41
Pcdhga6Q91XY2 Rlbp1-201ENSMUST00000053718 2134 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Pcdhga6Q91XY2 Cacna1c-227ENSMUST00000220022 7765 ntTSL 5 BASIC12.46□□□□□ -0.41
Pcdhga6Q91XY2 Psmd11-201ENSMUST00000017572 2848 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Pcdhga6Q91XY2 Gm13408-201ENSMUST00000119822 798 ntBASIC12.46□□□□□ -0.41
Pcdhga6Q91XY2 Gm13935-201ENSMUST00000121859 798 ntBASIC12.46□□□□□ -0.41
Pcdhga6Q91XY2 Tex22-201ENSMUST00000012355 1267 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Pcdhga6Q91XY2 Dnajb6-202ENSMUST00000012734 1024 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
Pcdhga6Q91XY2 1700003G13Rik-202ENSMUST00000131342 705 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
Pcdhga6Q91XY2 C1qtnf2-203ENSMUST00000173002 1147 ntAPPRIS ALT2 TSL 5 BASIC12.46□□□□□ -0.41
Pcdhga6Q91XY2 Gm16740-201ENSMUST00000181819 956 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
Pcdhga6Q91XY2 Gm28694-201ENSMUST00000190681 722 ntTSL 3 BASIC12.46□□□□□ -0.41
Pcdhga6Q91XY2 Gm45433-201ENSMUST00000209386 247 ntBASIC12.46□□□□□ -0.41
Pcdhga6Q91XY2 Dhrs2-201ENSMUST00000022820 1268 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Pcdhga6Q91XY2 Prm3-201ENSMUST00000050864 410 ntAPPRIS P1 BASIC12.46□□□□□ -0.41
Pcdhga6Q91XY2 Krtap19-1-201ENSMUST00000081334 493 ntAPPRIS P1 BASIC12.46□□□□□ -0.41
Pcdhga6Q91XY2 Mast1-201ENSMUST00000109741 4872 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Pcdhga6Q91XY2 Krt31-201ENSMUST00000007318 1581 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.42
Pcdhga6Q91XY2 Kyat1-205ENSMUST00000113662 1850 ntAPPRIS P1 TSL 5 BASIC12.46□□□□□ -0.42
Pcdhga6Q91XY2 Syne3-203ENSMUST00000109927 5263 ntAPPRIS ALT2 TSL 5 BASIC12.46□□□□□ -0.42
Pcdhga6Q91XY2 Spock3-203ENSMUST00000118003 2860 ntAPPRIS P3 TSL 5 BASIC12.46□□□□□ -0.42
Pcdhga6Q91XY2 M6pr-202ENSMUST00000112610 2539 ntAPPRIS P1 TSL 5 BASIC12.46□□□□□ -0.42
Pcdhga6Q91XY2 Minos1-203ENSMUST00000143971 2549 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.42
Pcdhga6Q91XY2 M6pr-201ENSMUST00000007602 2515 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.42
Pcdhga6Q91XY2 Ankrd42-205ENSMUST00000138267 2827 ntTSL 1 (best) BASIC12.46□□□□□ -0.42
Pcdhga6Q91XY2 Hcrtr1-202ENSMUST00000119423 2439 ntAPPRIS P1 TSL 5 BASIC12.46□□□□□ -0.42
Pcdhga6Q91XY2 Tmem201-203ENSMUST00000105687 3697 ntAPPRIS ALT2 TSL 1 (best) BASIC12.46□□□□□ -0.42
Pcdhga6Q91XY2 Anks1b-221ENSMUST00000182786 3042 ntTSL 5 BASIC12.46□□□□□ -0.42
Pcdhga6Q91XY2 Arhgap27-204ENSMUST00000107024 3976 ntAPPRIS ALT2 TSL 5 BASIC12.45□□□□□ -0.42
Pcdhga6Q91XY2 Arl14ep-201ENSMUST00000028536 3337 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Pcdhga6Q91XY2 Rtp3-201ENSMUST00000084922 1425 ntAPPRIS P1 TSL 5 BASIC12.45□□□□□ -0.42
Pcdhga6Q91XY2 Nrf1-210ENSMUST00000115211 3295 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
Pcdhga6Q91XY2 Ubap2l-204ENSMUST00000195995 3516 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
Pcdhga6Q91XY2 9130011E15Rik-201ENSMUST00000045396 2896 ntAPPRIS P1 TSL 5 BASIC12.45□□□□□ -0.42
Pcdhga6Q91XY2 Vsx1-201ENSMUST00000046095 3791 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Pcdhga6Q91XY2 Per2-201ENSMUST00000069620 5833 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Pcdhga6Q91XY2 Aldh6a1-201ENSMUST00000085192 3399 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Pcdhga6Q91XY2 Srp54a-202ENSMUST00000220578 4498 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Pcdhga6Q91XY2 Nfyc-203ENSMUST00000118902 1887 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Pcdhga6Q91XY2 Dnpep-202ENSMUST00000113605 1571 ntAPPRIS P3 TSL 1 (best) BASIC12.45□□□□□ -0.42
Pcdhga6Q91XY2 Park7-202ENSMUST00000105673 919 ntAPPRIS P1 TSL 5 BASIC12.45□□□□□ -0.42
Pcdhga6Q91XY2 Pla2g10-202ENSMUST00000115807 964 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
Pcdhga6Q91XY2 Gm12058-201ENSMUST00000118614 437 ntBASIC12.45□□□□□ -0.42
Pcdhga6Q91XY2 Gm11597-201ENSMUST00000121423 964 ntBASIC12.45□□□□□ -0.42
Pcdhga6Q91XY2 D630024D03Rik-201ENSMUST00000126265 720 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
Pcdhga6Q91XY2 Gimap3-202ENSMUST00000204036 2145 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Pcdhga6Q91XY2 Gm8913-201ENSMUST00000209491 641 ntBASIC12.45□□□□□ -0.42
Pcdhga6Q91XY2 Gm8712-201ENSMUST00000221090 701 ntBASIC12.45□□□□□ -0.42
Pcdhga6Q91XY2 Sst-201ENSMUST00000004480 599 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Pcdhga6Q91XY2 C1qb-201ENSMUST00000046384 1088 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Pcdhga6Q91XY2 Syncrip-210ENSMUST00000174391 6257 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
Pcdhga6Q91XY2 Pik3r1-201ENSMUST00000035532 2923 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
Pcdhga6Q91XY2 Foxd4-201ENSMUST00000058600 2345 ntAPPRIS P1 BASIC12.45□□□□□ -0.42
Pcdhga6Q91XY2 Tollip-204ENSMUST00000151890 1753 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
Pcdhga6Q91XY2 Satb2-202ENSMUST00000114415 5805 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Pcdhga6Q91XY2 Ankrd33-201ENSMUST00000070875 1442 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Pcdhga6Q91XY2 Fgfr3-209ENSMUST00000164207 4150 ntAPPRIS ALT2 TSL 1 (best) BASIC12.44□□□□□ -0.42
Pcdhga6Q91XY2 Fam13c-202ENSMUST00000105436 3380 ntAPPRIS ALT2 TSL 5 BASIC12.44□□□□□ -0.42
Pcdhga6Q91XY2 Gm17089-201ENSMUST00000171098 1394 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
Pcdhga6Q91XY2 Gm43081-201ENSMUST00000199082 1380 ntBASIC12.44□□□□□ -0.42
Retrieved 100 of 76,532 protein–RNA pairs in 47.9 ms