Protein–RNA interactions for Protein: Q91V10

Vsx1, Visual system homeobox 1, mousemouse

Predictions only

Length 363 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vsx1Q91V10 Chrdl1-203ENSMUST00000112878 4050 ntAPPRIS ALT2 TSL 5 BASIC12.36□□□□□ -0.43
Vsx1Q91V10 Tbc1d22a-201ENSMUST00000063414 3229 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Vsx1Q91V10 Mdm2-202ENSMUST00000105263 3145 ntTSL 5 BASIC12.36□□□□□ -0.43
Vsx1Q91V10 Smpd4-206ENSMUST00000163997 1722 ntTSL 5 BASIC12.36□□□□□ -0.43
Vsx1Q91V10 Emp1-206ENSMUST00000205156 2911 ntAPPRIS P1 TSL 5 BASIC12.36□□□□□ -0.43
Vsx1Q91V10 Cd81-201ENSMUST00000037941 1533 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Vsx1Q91V10 Ptpn7-203ENSMUST00000187985 1990 ntAPPRIS P1 TSL 5 BASIC12.36□□□□□ -0.43
Vsx1Q91V10 Vrtn-202ENSMUST00000166772 3098 ntAPPRIS P1 TSL 3 BASIC12.36□□□□□ -0.43
Vsx1Q91V10 Casc4-202ENSMUST00000089912 3602 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
Vsx1Q91V10 Wapl-205ENSMUST00000169910 4066 ntAPPRIS P3 TSL 1 (best) BASIC12.36□□□□□ -0.43
Vsx1Q91V10 Ltbp4-204ENSMUST00000118961 3444 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
Vsx1Q91V10 Map6-205ENSMUST00000207883 3431 ntAPPRIS P3 TSL 1 (best) BASIC12.36□□□□□ -0.43
Vsx1Q91V10 Gm13288-201ENSMUST00000094977 2850 ntAPPRIS P1 BASIC12.36□□□□□ -0.43
Vsx1Q91V10 Gns-201ENSMUST00000040344 3855 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Vsx1Q91V10 Gm14342-201ENSMUST00000137629 2119 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
Vsx1Q91V10 Cep68-201ENSMUST00000050611 4804 ntAPPRIS P2 TSL 1 (best) BASIC12.35□□□□□ -0.43
Vsx1Q91V10 Acoxl-202ENSMUST00000110344 1573 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
Vsx1Q91V10 Asic3-202ENSMUST00000196296 1593 ntAPPRIS P1 TSL 5 BASIC12.35□□□□□ -0.43
Vsx1Q91V10 Fetub-201ENSMUST00000023587 1573 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Vsx1Q91V10 Nup205-204ENSMUST00000201374 6411 ntAPPRIS ALT2 TSL 1 (best) BASIC12.35□□□□□ -0.43
Vsx1Q91V10 Cxcr5-204ENSMUST00000215293 2846 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Vsx1Q91V10 Max-201ENSMUST00000082136 1926 ntAPPRIS ALT1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Vsx1Q91V10 Leng8-203ENSMUST00000121270 3620 ntAPPRIS ALT2 TSL 5 BASIC12.35□□□□□ -0.43
Vsx1Q91V10 Cipc-211ENSMUST00000191463 1499 ntAPPRIS ALT2 TSL 1 (best) BASIC12.35□□□□□ -0.43
Vsx1Q91V10 AC122371.1-201ENSMUST00000220876 1477 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
Vsx1Q91V10 Mpp3-204ENSMUST00000107168 3094 ntAPPRIS P1 TSL 5 BASIC12.35□□□□□ -0.43
Vsx1Q91V10 Itga3-203ENSMUST00000120375 4697 ntAPPRIS ALT2 TSL 1 (best) BASIC12.35□□□□□ -0.43
Vsx1Q91V10 AC087890.1-201ENSMUST00000219321 1823 ntTSL 5 BASIC12.35□□□□□ -0.43
Vsx1Q91V10 Cpq-207ENSMUST00000228916 1842 ntAPPRIS P1 BASIC12.35□□□□□ -0.43
Vsx1Q91V10 AC116503.1-201ENSMUST00000215445 2192 ntBASIC12.35□□□□□ -0.43
Vsx1Q91V10 Clcn6-201ENSMUST00000030879 3306 ntAPPRIS P2 TSL 1 (best) BASIC12.35□□□□□ -0.43
Vsx1Q91V10 Btrc-202ENSMUST00000111936 2064 ntAPPRIS ALT1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Vsx1Q91V10 Magi1-206ENSMUST00000203688 4969 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
Vsx1Q91V10 Srebf2-201ENSMUST00000023100 4989 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Vsx1Q91V10 Inca1-202ENSMUST00000108541 1150 ntAPPRIS P3 TSL 1 (best) BASIC12.35□□□□□ -0.43
Vsx1Q91V10 Cd27-202ENSMUST00000112281 832 ntTSL 3 BASIC12.35□□□□□ -0.43
Vsx1Q91V10 Rps2-ps4-201ENSMUST00000121977 633 ntBASIC12.35□□□□□ -0.43
Vsx1Q91V10 Inca1-205ENSMUST00000126114 1189 ntAPPRIS P3 TSL 1 (best) BASIC12.35□□□□□ -0.43
Vsx1Q91V10 Gm12130-201ENSMUST00000133599 639 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
Vsx1Q91V10 Gm28139-201ENSMUST00000189480 643 ntTSL 5 BASIC12.35□□□□□ -0.43
Vsx1Q91V10 Gm18893-201ENSMUST00000198416 943 ntBASIC12.35□□□□□ -0.43
Vsx1Q91V10 1700128F08Rik-201ENSMUST00000034483 1110 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
Vsx1Q91V10 Inca1-201ENSMUST00000073625 1218 ntAPPRIS P3 TSL 1 (best) BASIC12.35□□□□□ -0.43
Vsx1Q91V10 Gm6992-201ENSMUST00000217973 1607 ntBASIC12.35□□□□□ -0.43
Vsx1Q91V10 Esam-201ENSMUST00000002011 1865 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Vsx1Q91V10 Ate1-204ENSMUST00000178534 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC12.35□□□□□ -0.43
Vsx1Q91V10 Cyp4x1-201ENSMUST00000051400 1524 ntAPPRIS P2 TSL 1 (best) BASIC12.35□□□□□ -0.43
Vsx1Q91V10 Per1-206ENSMUST00000166748 4636 ntAPPRIS P2 TSL 1 (best) BASIC12.35□□□□□ -0.43
Vsx1Q91V10 Ablim2-201ENSMUST00000054598 3564 ntAPPRIS P3 TSL 1 (best) BASIC12.35□□□□□ -0.43
Vsx1Q91V10 Daw1-201ENSMUST00000065403 1651 ntAPPRIS P1 TSL 5 BASIC12.35□□□□□ -0.43
Vsx1Q91V10 Crem-233ENSMUST00000154135 2530 ntTSL 5 BASIC12.35□□□□□ -0.43
Vsx1Q91V10 Adgrv1-206ENSMUST00000128120 1591 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
Vsx1Q91V10 Prkce-201ENSMUST00000097274 3161 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Vsx1Q91V10 Bicd1-202ENSMUST00000086829 9667 ntAPPRIS P2 TSL 1 (best) BASIC12.34□□□□□ -0.43
Vsx1Q91V10 Cd34-201ENSMUST00000016638 2454 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Vsx1Q91V10 Ccdc85a-204ENSMUST00000109502 5220 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Vsx1Q91V10 Gm6580-201ENSMUST00000117504 1357 ntBASIC12.34□□□□□ -0.43
Vsx1Q91V10 Rabggtb-201ENSMUST00000089950 1381 ntAPPRIS P1 TSL 5 BASIC12.34□□□□□ -0.43
Vsx1Q91V10 Zfp385c-201ENSMUST00000103119 2766 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Vsx1Q91V10 2310007B03Rik-201ENSMUST00000043718 2299 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Vsx1Q91V10 Mettl1-201ENSMUST00000006915 1791 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Vsx1Q91V10 Net1-201ENSMUST00000091853 2680 ntAPPRIS P3 TSL 1 (best) BASIC12.34□□□□□ -0.43
Vsx1Q91V10 Gm14058-201ENSMUST00000116082 735 ntBASIC12.34□□□□□ -0.43
Vsx1Q91V10 Gm14460-201ENSMUST00000121511 639 ntBASIC12.34□□□□□ -0.43
Vsx1Q91V10 Gm12798-201ENSMUST00000124786 666 ntTSL 5 BASIC12.34□□□□□ -0.43
Vsx1Q91V10 Cabp2-202ENSMUST00000159556 781 ntAPPRIS ALT2 TSL 1 (best) BASIC12.34□□□□□ -0.43
Vsx1Q91V10 Ccdc127-205ENSMUST00000162672 677 ntTSL 3 BASIC12.34□□□□□ -0.43
Vsx1Q91V10 Omt2a-203ENSMUST00000166056 1167 ntAPPRIS P4 TSL 1 (best) BASIC12.34□□□□□ -0.43
Vsx1Q91V10 Smpd4-223ENSMUST00000172182 516 ntTSL 3 BASIC12.34□□□□□ -0.43
Vsx1Q91V10 Ccdc28a-203ENSMUST00000173243 590 ntTSL 5 BASIC12.34□□□□□ -0.43
Vsx1Q91V10 Gm8018-201ENSMUST00000173536 789 ntBASIC12.34□□□□□ -0.43
Vsx1Q91V10 Gm27627-201ENSMUST00000183644 150 ntBASIC12.34□□□□□ -0.43
Vsx1Q91V10 4930447N08Rik-203ENSMUST00000198879 1157 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Vsx1Q91V10 4933421D24Rik-201ENSMUST00000209302 1286 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Vsx1Q91V10 1700023F06Rik-201ENSMUST00000021323 1199 ntAPPRIS P2 TSL 5 BASIC12.34□□□□□ -0.43
Vsx1Q91V10 Pym1-203ENSMUST00000218218 1143 ntTSL 3 BASIC12.34□□□□□ -0.43
Vsx1Q91V10 AC132901.1-201ENSMUST00000224345 508 ntBASIC12.34□□□□□ -0.43
Vsx1Q91V10 AC159205.5-202ENSMUST00000224849 386 ntBASIC12.34□□□□□ -0.43
Vsx1Q91V10 Pebp4-201ENSMUST00000022678 1079 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Vsx1Q91V10 S100a1-201ENSMUST00000060738 677 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Vsx1Q91V10 Nceh1-202ENSMUST00000091284 830 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Vsx1Q91V10 Tepp-201ENSMUST00000098480 660 ntAPPRIS ALT2 TSL 1 (best) BASIC12.34□□□□□ -0.43
Vsx1Q91V10 Tal1-203ENSMUST00000161601 3703 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Vsx1Q91V10 Gm42748-201ENSMUST00000199354 2341 ntBASIC12.34□□□□□ -0.43
Vsx1Q91V10 AC159308.2-201ENSMUST00000213592 2325 ntBASIC12.34□□□□□ -0.43
Vsx1Q91V10 Ramp1-201ENSMUST00000097648 2325 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Vsx1Q91V10 Nup88-203ENSMUST00000108531 2453 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Vsx1Q91V10 Ankmy2-201ENSMUST00000041640 2456 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Vsx1Q91V10 Gpr107-201ENSMUST00000056433 6134 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Vsx1Q91V10 Ankrd17-201ENSMUST00000014421 10458 ntAPPRIS P4 TSL 5 BASIC12.34□□□□□ -0.43
Vsx1Q91V10 Ywhab-201ENSMUST00000018470 3013 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Vsx1Q91V10 Mlkl-202ENSMUST00000120432 1976 ntAPPRIS P3 TSL 1 (best) BASIC12.34□□□□□ -0.43
Vsx1Q91V10 Cd33-201ENSMUST00000004728 1962 ntAPPRIS ALT2 TSL 1 (best) BASIC12.34□□□□□ -0.43
Vsx1Q91V10 Hdac5-203ENSMUST00000107151 4852 ntTSL 5 BASIC12.34□□□□□ -0.43
Vsx1Q91V10 Hnf1b-201ENSMUST00000021016 2759 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Vsx1Q91V10 Nrf1-211ENSMUST00000115212 3584 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Vsx1Q91V10 Srrm1-202ENSMUST00000084846 3740 ntAPPRIS ALT2 TSL 1 (best) BASIC12.34□□□□□ -0.43
Vsx1Q91V10 Tmed9-203ENSMUST00000224741 1450 ntBASIC12.34□□□□□ -0.43
Vsx1Q91V10 Mb21d1-201ENSMUST00000034898 3231 ntTSL 1 (best) BASIC12.33□□□□□ -0.43
Vsx1Q91V10 Tcf4-204ENSMUST00000114978 2437 ntTSL 1 (best) BASIC12.33□□□□□ -0.43
Retrieved 100 of 76,532 protein–RNA pairs in 89.6 ms