Protein–RNA interactions for Protein: Q8VC31

Ccdc9, Coiled-coil domain-containing protein 9, mousemouse

Known RBP Predictions only

Length 543 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc9Q8VC31 Gm21722-201ENSMUST00000190153 696 ntBASIC15□□□□□ -0.01
Ccdc9Q8VC31 Gm28423-201ENSMUST00000190701 696 ntBASIC15□□□□□ -0.01
Ccdc9Q8VC31 Gm21899-201ENSMUST00000190745 696 ntBASIC15□□□□□ -0.01
Ccdc9Q8VC31 Gm21910-201ENSMUST00000191163 696 ntBASIC15□□□□□ -0.01
Ccdc9Q8VC31 Gm21849-201ENSMUST00000191571 696 ntBASIC15□□□□□ -0.01
Ccdc9Q8VC31 Gm28678-201ENSMUST00000191593 696 ntBASIC15□□□□□ -0.01
Ccdc9Q8VC31 Gm20910-201ENSMUST00000193268 696 ntBASIC15□□□□□ -0.01
Ccdc9Q8VC31 Gm21871-201ENSMUST00000194621 696 ntBASIC15□□□□□ -0.01
Ccdc9Q8VC31 Gm30684-201ENSMUST00000205632 600 ntTSL 3 BASIC15□□□□□ -0.01
Ccdc9Q8VC31 Gm38948-201ENSMUST00000210035 688 ntTSL 3 BASIC15□□□□□ -0.01
Ccdc9Q8VC31 Coa6-202ENSMUST00000211868 564 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Ccdc9Q8VC31 Dsc2-201ENSMUST00000039247 4630 ntAPPRIS P3 TSL 1 (best) BASIC15□□□□□ -0.01
Ccdc9Q8VC31 Adar-204ENSMUST00000118341 2399 ntTSL 1 (best) BASIC15□□□□□ -0.01
Ccdc9Q8VC31 Raver1-201ENSMUST00000115487 3470 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Ccdc9Q8VC31 Lig1-211ENSMUST00000177588 3174 ntAPPRIS P1 TSL 5 BASIC15□□□□□ -0.01
Ccdc9Q8VC31 Olfr279-203ENSMUST00000216822 5605 ntAPPRIS P1 TSL 5 BASIC15□□□□□ -0.01
Ccdc9Q8VC31 Gm6124-201ENSMUST00000188240 2580 ntBASIC15□□□□□ -0.01
Ccdc9Q8VC31 Mapk3-203ENSMUST00000091328 1716 ntTSL 1 (best) BASIC15□□□□□ -0.01
Ccdc9Q8VC31 Rai2-201ENSMUST00000061514 2204 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Ccdc9Q8VC31 Mb21d1-202ENSMUST00000070742 4049 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Ccdc9Q8VC31 Map4-206ENSMUST00000169851 3446 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
Ccdc9Q8VC31 0610006L08Rik-201ENSMUST00000205326 1589 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
Ccdc9Q8VC31 Tmem138-201ENSMUST00000025568 1590 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Ccdc9Q8VC31 Ager-209ENSMUST00000174496 1347 ntAPPRIS ALT2 TSL 1 (best) BASIC14.99□□□□□ -0.01
Ccdc9Q8VC31 Tmub1-201ENSMUST00000030799 1333 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Ccdc9Q8VC31 Bpi-202ENSMUST00000109499 1778 ntAPPRIS ALT2 TSL 1 (best) BASIC14.99□□□□□ -0.01
Ccdc9Q8VC31 Cnga4-202ENSMUST00000210344 1977 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
Ccdc9Q8VC31 Pex11g-202ENSMUST00000111081 666 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
Ccdc9Q8VC31 AC155937.1-202ENSMUST00000156229 621 ntAPPRIS P1 TSL 2 BASIC14.99□□□□□ -0.01
Ccdc9Q8VC31 Gm24158-201ENSMUST00000175263 71 ntBASIC14.99□□□□□ -0.01
Ccdc9Q8VC31 Gm40123-201ENSMUST00000198175 1027 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
Ccdc9Q8VC31 Gm5312-201ENSMUST00000203728 547 ntBASIC14.99□□□□□ -0.01
Ccdc9Q8VC31 AC140397.2-201ENSMUST00000224213 834 ntBASIC14.99□□□□□ -0.01
Ccdc9Q8VC31 AC166997.1-201ENSMUST00000225122 572 ntBASIC14.99□□□□□ -0.01
Ccdc9Q8VC31 Tssk3-201ENSMUST00000000421 1280 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Ccdc9Q8VC31 Gm8396-201ENSMUST00000057361 823 ntBASIC14.99□□□□□ -0.01
Ccdc9Q8VC31 Rnf138rt1-201ENSMUST00000059320 1191 ntAPPRIS P1 BASIC14.99□□□□□ -0.01
Ccdc9Q8VC31 Piwil1-201ENSMUST00000086056 4016 ntAPPRIS P2 TSL 1 (best) BASIC14.99□□□□□ -0.01
Ccdc9Q8VC31 Calr-201ENSMUST00000003912 2184 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Ccdc9Q8VC31 Siglech-206ENSMUST00000171077 1934 ntAPPRIS P3 TSL 5 BASIC14.99□□□□□ -0.01
Ccdc9Q8VC31 Vasn-201ENSMUST00000038770 2829 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Ccdc9Q8VC31 Serhl-205ENSMUST00000166427 2577 ntAPPRIS ALT2 TSL 1 (best) BASIC14.99□□□□□ -0.01
Ccdc9Q8VC31 Sparc-202ENSMUST00000108858 2115 ntAPPRIS ALT2 TSL 1 (best) BASIC14.99□□□□□ -0.01
Ccdc9Q8VC31 Rnh1-202ENSMUST00000167493 1656 ntAPPRIS P3 TSL 1 (best) BASIC14.99□□□□□ -0.01
Ccdc9Q8VC31 Rnh1-204ENSMUST00000210314 1658 ntAPPRIS ALT2 TSL 1 (best) BASIC14.99□□□□□ -0.01
Ccdc9Q8VC31 Adgrl3-214ENSMUST00000120445 5230 ntTSL 5 BASIC14.99□□□□□ -0.01
Ccdc9Q8VC31 Spats2l-211ENSMUST00000169772 2311 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Ccdc9Q8VC31 Acrbp-202ENSMUST00000088294 1883 ntAPPRIS P3 TSL 1 (best) BASIC14.99□□□□□ -0.01
Ccdc9Q8VC31 Gypc-202ENSMUST00000174000 2072 ntAPPRIS ALT2 TSL 3 BASIC14.99□□□□□ -0.01
Ccdc9Q8VC31 Gtf2a1-202ENSMUST00000063314 2265 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
Ccdc9Q8VC31 Slc38a3-203ENSMUST00000177567 2456 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Ccdc9Q8VC31 Slc38a3-209ENSMUST00000193932 2463 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Ccdc9Q8VC31 Trak1-201ENSMUST00000045903 4827 ntAPPRIS P2 TSL 1 (best) BASIC14.99□□□□□ -0.01
Ccdc9Q8VC31 Ppp1r3b-204ENSMUST00000211648 4386 ntAPPRIS P1 TSL 3 BASIC14.99□□□□□ -0.01
Ccdc9Q8VC31 Prok1-202ENSMUST00000197758 3063 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
Ccdc9Q8VC31 Slc22a14-201ENSMUST00000093775 2213 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Ccdc9Q8VC31 Aip-202ENSMUST00000117831 1378 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Ccdc9Q8VC31 Gpc6-202ENSMUST00000088483 3488 ntAPPRIS P3 TSL 5 BASIC14.98□□□□□ -0.01
Ccdc9Q8VC31 Khnyn-201ENSMUST00000022831 3898 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Ccdc9Q8VC31 Lgi4-201ENSMUST00000039775 4037 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Ccdc9Q8VC31 Rasgrp4-212ENSMUST00000204194 2993 ntTSL 5 BASIC14.98□□□□□ -0.01
Ccdc9Q8VC31 Brd3-201ENSMUST00000028282 5419 ntAPPRIS P3 TSL 5 BASIC14.98□□□□□ -0.01
Ccdc9Q8VC31 Bcat2-202ENSMUST00000120864 1536 ntTSL 5 BASIC14.98□□□□□ -0.01
Ccdc9Q8VC31 Cidec-201ENSMUST00000032416 1703 ntAPPRIS P2 TSL 1 (best) BASIC14.98□□□□□ -0.01
Ccdc9Q8VC31 Ppm1g-201ENSMUST00000031032 2307 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Ccdc9Q8VC31 Stab1-201ENSMUST00000036618 7999 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Ccdc9Q8VC31 Tcp11l2-201ENSMUST00000020223 2725 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Ccdc9Q8VC31 Uimc1-201ENSMUST00000026997 2931 ntAPPRIS P2 TSL 1 (best) BASIC14.98□□□□□ -0.01
Ccdc9Q8VC31 AU019823-201ENSMUST00000131351 3316 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Ccdc9Q8VC31 AU019823-205ENSMUST00000171462 3339 ntAPPRIS P1 TSL 3 BASIC14.98□□□□□ -0.01
Ccdc9Q8VC31 Cdh7-202ENSMUST00000112701 4945 ntAPPRIS P1 TSL 5 BASIC14.98□□□□□ -0.01
Ccdc9Q8VC31 Gtf3c4-201ENSMUST00000037117 6941 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Ccdc9Q8VC31 Sars-202ENSMUST00000102625 1866 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
Ccdc9Q8VC31 Ppil3-202ENSMUST00000114345 1175 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
Ccdc9Q8VC31 Gm12201-201ENSMUST00000120657 1234 ntBASIC14.98□□□□□ -0.01
Ccdc9Q8VC31 Gm12264-201ENSMUST00000123949 500 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
Ccdc9Q8VC31 Tmem262-201ENSMUST00000143303 545 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Ccdc9Q8VC31 Cmc4-203ENSMUST00000149863 507 ntAPPRIS P1 TSL 3 BASIC14.98□□□□□ -0.01
Ccdc9Q8VC31 Tmem217-202ENSMUST00000168339 812 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Ccdc9Q8VC31 Gm10253-201ENSMUST00000194270 940 ntBASIC14.98□□□□□ -0.01
Ccdc9Q8VC31 Gm44662-201ENSMUST00000206970 412 ntTSL 5 BASIC14.98□□□□□ -0.01
Ccdc9Q8VC31 Nek4-204ENSMUST00000226833 1252 ntAPPRIS ALT2 BASIC14.98□□□□□ -0.01
Ccdc9Q8VC31 Il31-201ENSMUST00000031389 806 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Ccdc9Q8VC31 Tmem116-201ENSMUST00000031405 1288 ntAPPRIS ALT2 TSL 1 (best) BASIC14.98□□□□□ -0.01
Ccdc9Q8VC31 H2bfm-201ENSMUST00000059808 1052 ntAPPRIS P1 BASIC14.98□□□□□ -0.01
Ccdc9Q8VC31 Erich4-201ENSMUST00000098663 911 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Ccdc9Q8VC31 Stat5a-203ENSMUST00000107357 3605 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
Ccdc9Q8VC31 Zcchc18-202ENSMUST00000101227 2045 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Ccdc9Q8VC31 Olfr582-203ENSMUST00000211036 1849 ntAPPRIS P1 TSL 5 BASIC14.98□□□□□ -0.01
Ccdc9Q8VC31 Dnmt3a-218ENSMUST00000174817 8737 ntAPPRIS ALT2 TSL 1 (best) BASIC14.98□□□□□ -0.01
Ccdc9Q8VC31 4931406C07Rik-201ENSMUST00000034414 2562 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Ccdc9Q8VC31 Ap2b1-206ENSMUST00000176523 2742 ntTSL 5 BASIC14.98□□□□□ -0.01
Ccdc9Q8VC31 Pcdhga10-201ENSMUST00000193404 4732 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Ccdc9Q8VC31 Abcc10-202ENSMUST00000095261 5266 ntAPPRIS P3 TSL 1 (best) BASIC14.98□□□□□ -0.01
Ccdc9Q8VC31 Sirt5-201ENSMUST00000066804 1367 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Ccdc9Q8VC31 Zfp654-202ENSMUST00000207826 6261 ntAPPRIS ALT2 TSL 5 BASIC14.97□□□□□ -0.01
Ccdc9Q8VC31 Zmynd8-220ENSMUST00000170272 5076 ntAPPRIS ALT2 TSL 1 (best) BASIC14.97□□□□□ -0.01
Ccdc9Q8VC31 Tmem56-204ENSMUST00000135818 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC14.97□□□□□ -0.01
Ccdc9Q8VC31 Sec11a-201ENSMUST00000026818 1345 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Ccdc9Q8VC31 Tank-203ENSMUST00000112495 2039 ntAPPRIS ALT2 TSL 1 (best) BASIC14.97□□□□□ -0.01
Retrieved 100 of 76,532 protein–RNA pairs in 50.2 ms