Protein–RNA interactions for Protein: Q8CDG3

Vcpip1, Deubiquitinating protein VCIP135, mousemouse

Predictions only

Length 1,220 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vcpip1Q8CDG3 AC165254.1-201ENSMUST00000220736 599 ntTSL 5 BASIC13.41□□□□□ -0.26
Vcpip1Q8CDG3 Cyb5d1-201ENSMUST00000051620 753 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Vcpip1Q8CDG3 Rbfox2-202ENSMUST00000111581 3072 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
Vcpip1Q8CDG3 4930429D17Rik-201ENSMUST00000198193 1624 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
Vcpip1Q8CDG3 Ccdc85a-204ENSMUST00000109502 5220 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
Vcpip1Q8CDG3 Nab1-204ENSMUST00000170269 1371 ntTSL 5 BASIC13.41□□□□□ -0.26
Vcpip1Q8CDG3 AC159314.1-201ENSMUST00000216917 3485 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
Vcpip1Q8CDG3 Pmp22-204ENSMUST00000108702 1822 ntAPPRIS P1 TSL 3 BASIC13.41□□□□□ -0.26
Vcpip1Q8CDG3 Gm10728-201ENSMUST00000194292 1829 ntBASIC13.41□□□□□ -0.26
Vcpip1Q8CDG3 Cbfa2t2-202ENSMUST00000099178 3247 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
Vcpip1Q8CDG3 Tsku-202ENSMUST00000164726 2620 ntAPPRIS P1 TSL 2 BASIC13.41□□□□□ -0.26
Vcpip1Q8CDG3 Nrg1-206ENSMUST00000208205 2645 ntAPPRIS ALT2 TSL 5 BASIC13.41□□□□□ -0.26
Vcpip1Q8CDG3 B230209E15Rik-201ENSMUST00000209115 1597 ntTSL 5 BASIC13.41□□□□□ -0.26
Vcpip1Q8CDG3 AC091764.2-201ENSMUST00000218190 1590 ntTSL 5 BASIC13.41□□□□□ -0.26
Vcpip1Q8CDG3 4931409K22Rik-201ENSMUST00000088302 2613 ntAPPRIS P1 TSL 5 BASIC13.41□□□□□ -0.26
Vcpip1Q8CDG3 Bcl11a-201ENSMUST00000000881 3061 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
Vcpip1Q8CDG3 AC154517.2-201ENSMUST00000220829 2458 ntBASIC13.4□□□□□ -0.26
Vcpip1Q8CDG3 Maats1-201ENSMUST00000023501 2750 ntAPPRIS P2 TSL 1 (best) BASIC13.4□□□□□ -0.26
Vcpip1Q8CDG3 Shisa9-201ENSMUST00000023138 4326 ntAPPRIS ALT2 TSL 1 (best) BASIC13.4□□□□□ -0.26
Vcpip1Q8CDG3 Gm44260-201ENSMUST00000204946 2094 ntBASIC13.4□□□□□ -0.26
Vcpip1Q8CDG3 Gm28043-201ENSMUST00000130871 6521 ntAPPRIS P1 TSL 2 BASIC13.4□□□□□ -0.26
Vcpip1Q8CDG3 Acsm4-201ENSMUST00000047045 2152 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Vcpip1Q8CDG3 Hnrnpa2b1-203ENSMUST00000114459 1728 ntAPPRIS ALT1 TSL 5 BASIC13.4□□□□□ -0.26
Vcpip1Q8CDG3 Tmem63b-201ENSMUST00000113523 3284 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Vcpip1Q8CDG3 Pkig-203ENSMUST00000109400 1059 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Vcpip1Q8CDG3 Pole-203ENSMUST00000112482 747 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
Vcpip1Q8CDG3 Qdpr-203ENSMUST00000118097 1232 ntTSL 5 BASIC13.4□□□□□ -0.26
Vcpip1Q8CDG3 U2af1l4-206ENSMUST00000163654 781 ntTSL 2 BASIC13.4□□□□□ -0.26
Vcpip1Q8CDG3 U2af1l4-221ENSMUST00000167361 860 ntTSL 2 BASIC13.4□□□□□ -0.26
Vcpip1Q8CDG3 Gm26618-201ENSMUST00000181123 497 ntTSL 2 BASIC13.4□□□□□ -0.26
Vcpip1Q8CDG3 1700065I16Rik-202ENSMUST00000185477 813 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
Vcpip1Q8CDG3 Gm28139-201ENSMUST00000189480 643 ntTSL 5 BASIC13.4□□□□□ -0.26
Vcpip1Q8CDG3 Chd3os-203ENSMUST00000218008 1026 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
Vcpip1Q8CDG3 Net1-207ENSMUST00000223258 597 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
Vcpip1Q8CDG3 AC132317.1-201ENSMUST00000227227 962 ntBASIC13.4□□□□□ -0.26
Vcpip1Q8CDG3 Tpd52-204ENSMUST00000094381 1074 ntTSL 3 BASIC13.4□□□□□ -0.26
Vcpip1Q8CDG3 Lmnb2-204ENSMUST00000179022 3370 ntAPPRIS P2 TSL 1 (best) BASIC13.4□□□□□ -0.26
Vcpip1Q8CDG3 Iba57-201ENSMUST00000054523 4021 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Vcpip1Q8CDG3 Met-202ENSMUST00000115442 4663 ntAPPRIS P1 TSL 5 BASIC13.4□□□□□ -0.26
Vcpip1Q8CDG3 D630014O11Rik-201ENSMUST00000160562 3019 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
Vcpip1Q8CDG3 Tspan14-201ENSMUST00000047652 2475 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Vcpip1Q8CDG3 Gm8038-201ENSMUST00000164674 2044 ntBASIC13.4□□□□□ -0.26
Vcpip1Q8CDG3 Dcaf4-208ENSMUST00000223291 2005 ntAPPRIS ALT2 TSL 1 (best) BASIC13.4□□□□□ -0.26
Vcpip1Q8CDG3 Gm9881-201ENSMUST00000068783 3205 ntAPPRIS P1 BASIC13.4□□□□□ -0.26
Vcpip1Q8CDG3 Tmem168-201ENSMUST00000031554 4587 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Vcpip1Q8CDG3 Acadsb-201ENSMUST00000015829 6081 ntAPPRIS P2 TSL 1 (best) BASIC13.4□□□□□ -0.26
Vcpip1Q8CDG3 Zfp28-201ENSMUST00000081022 4447 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.27
Vcpip1Q8CDG3 Hgs-202ENSMUST00000106203 2901 ntAPPRIS ALT2 TSL 5 BASIC13.4□□□□□ -0.27
Vcpip1Q8CDG3 Slc25a13-203ENSMUST00000188414 3121 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Vcpip1Q8CDG3 Hdac5-201ENSMUST00000008999 4269 ntAPPRIS ALT2 TSL 1 (best) BASIC13.39□□□□□ -0.27
Vcpip1Q8CDG3 Gm17276-201ENSMUST00000180839 2782 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
Vcpip1Q8CDG3 Dnmt3l-205ENSMUST00000138785 1822 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Vcpip1Q8CDG3 Zfp108-201ENSMUST00000072713 1929 ntAPPRIS ALT2 TSL 5 BASIC13.39□□□□□ -0.27
Vcpip1Q8CDG3 Tfdp2-205ENSMUST00000179416 2408 ntAPPRIS P3 TSL 1 (best) BASIC13.39□□□□□ -0.27
Vcpip1Q8CDG3 Htr2c-203ENSMUST00000112831 809 ntTSL 3 BASIC13.39□□□□□ -0.27
Vcpip1Q8CDG3 Cabp2-201ENSMUST00000159148 1030 ntAPPRIS ALT2 TSL 1 (best) BASIC13.39□□□□□ -0.27
Vcpip1Q8CDG3 Nudt17-202ENSMUST00000171249 1110 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Vcpip1Q8CDG3 Txnl4b-202ENSMUST00000178445 830 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Vcpip1Q8CDG3 Gm26721-201ENSMUST00000181723 992 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
Vcpip1Q8CDG3 Aprt-203ENSMUST00000211823 590 ntTSL 3 BASIC13.39□□□□□ -0.27
Vcpip1Q8CDG3 AC165260.3-202ENSMUST00000224550 1031 ntBASIC13.39□□□□□ -0.27
Vcpip1Q8CDG3 Tomm7-201ENSMUST00000030851 1125 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Vcpip1Q8CDG3 Ccdc113-201ENSMUST00000041569 1288 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Vcpip1Q8CDG3 Gatad2a-201ENSMUST00000065169 3812 ntAPPRIS P3 TSL 1 (best) BASIC13.39□□□□□ -0.27
Vcpip1Q8CDG3 Tmem80-204ENSMUST00000128906 1387 ntTSL 2 BASIC13.39□□□□□ -0.27
Vcpip1Q8CDG3 Gm12968-201ENSMUST00000138291 1454 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
Vcpip1Q8CDG3 Acnat2-201ENSMUST00000081541 1664 ntAPPRIS P2 TSL 1 (best) BASIC13.39□□□□□ -0.27
Vcpip1Q8CDG3 Gm10097-201ENSMUST00000180100 2784 ntAPPRIS P1 BASIC13.39□□□□□ -0.27
Vcpip1Q8CDG3 Terb1-201ENSMUST00000064576 2950 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Vcpip1Q8CDG3 Slc22a5-201ENSMUST00000019044 3062 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Vcpip1Q8CDG3 Rgs6-222ENSMUST00000202210 3069 ntAPPRIS ALT2 TSL 5 BASIC13.39□□□□□ -0.27
Vcpip1Q8CDG3 Fads1-201ENSMUST00000010807 3456 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Vcpip1Q8CDG3 Runx3-201ENSMUST00000056977 3884 ntAPPRIS P2 TSL 1 (best) BASIC13.39□□□□□ -0.27
Vcpip1Q8CDG3 Trappc9-204ENSMUST00000170633 4688 ntAPPRIS ALT2 TSL 1 (best) BASIC13.39□□□□□ -0.27
Vcpip1Q8CDG3 Herc4-208ENSMUST00000219577 3914 ntAPPRIS ALT1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Vcpip1Q8CDG3 Prkch-201ENSMUST00000021527 3545 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Vcpip1Q8CDG3 Zscan22-201ENSMUST00000055528 2620 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Vcpip1Q8CDG3 A830082K12Rik-201ENSMUST00000123998 2203 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
Vcpip1Q8CDG3 Prkce-202ENSMUST00000097275 6254 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Vcpip1Q8CDG3 Retreg1-206ENSMUST00000228306 1430 ntBASIC13.39□□□□□ -0.27
Vcpip1Q8CDG3 Chst15-201ENSMUST00000077472 5041 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Vcpip1Q8CDG3 Dysf-213ENSMUST00000203803 6590 ntTSL 5 BASIC13.38□□□□□ -0.27
Vcpip1Q8CDG3 Aff4-201ENSMUST00000060945 10099 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Vcpip1Q8CDG3 Lrp8-206ENSMUST00000126573 2590 ntTSL 5 BASIC13.38□□□□□ -0.27
Vcpip1Q8CDG3 Ints1-201ENSMUST00000072607 7102 ntAPPRIS ALT2 TSL 5 BASIC13.38□□□□□ -0.27
Vcpip1Q8CDG3 B230398E01Rik-201ENSMUST00000125186 1958 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
Vcpip1Q8CDG3 4732471J01Rik-204ENSMUST00000206436 2430 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
Vcpip1Q8CDG3 Sdf4-201ENSMUST00000050078 5177 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Vcpip1Q8CDG3 Tmem159-202ENSMUST00000118737 1395 ntAPPRIS P1 TSL 5 BASIC13.38□□□□□ -0.27
Vcpip1Q8CDG3 Corin-201ENSMUST00000005352 4862 ntAPPRIS P3 TSL 1 (best) BASIC13.38□□□□□ -0.27
Vcpip1Q8CDG3 Blvrb-202ENSMUST00000108357 782 ntTSL 2 BASIC13.38□□□□□ -0.27
Vcpip1Q8CDG3 Apoc1-202ENSMUST00000108451 532 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Vcpip1Q8CDG3 Plekhg5-204ENSMUST00000118648 3818 ntAPPRIS ALT2 TSL 5 BASIC13.38□□□□□ -0.27
Vcpip1Q8CDG3 Mpc1-202ENSMUST00000124023 555 ntTSL 2 BASIC13.38□□□□□ -0.27
Vcpip1Q8CDG3 C87198-201ENSMUST00000173553 1045 ntTSL 3 BASIC13.38□□□□□ -0.27
Vcpip1Q8CDG3 Kcnip4-207ENSMUST00000176191 2116 ntTSL 5 BASIC13.38□□□□□ -0.27
Vcpip1Q8CDG3 Rnf141-207ENSMUST00000176716 1080 ntTSL 2 BASIC13.38□□□□□ -0.27
Vcpip1Q8CDG3 Tmem205-202ENSMUST00000178988 862 ntAPPRIS P1 TSL 2 BASIC13.38□□□□□ -0.27
Vcpip1Q8CDG3 6430590A07Rik-201ENSMUST00000181813 1032 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
Vcpip1Q8CDG3 Gm29127-201ENSMUST00000188304 517 ntBASIC13.38□□□□□ -0.27
Retrieved 100 of 76,532 protein–RNA pairs in 30.7 ms