Protein–RNA interactions for Protein: Q8BY87

Usp47, Ubiquitin carboxyl-terminal hydrolase 47, mousemouse

Predictions only

Length 1,376 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp47Q8BY87 Gm37844-201ENSMUST00000192473 4097 ntBASIC17.51■□□□□ 0.39
Usp47Q8BY87 Pcnx3-201ENSMUST00000068169 5276 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
Usp47Q8BY87 Pbld2-201ENSMUST00000020262 2212 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Usp47Q8BY87 Thap1-201ENSMUST00000036807 2295 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Usp47Q8BY87 Map4k2-201ENSMUST00000025897 4644 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Usp47Q8BY87 Ip6k3-201ENSMUST00000025046 2307 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Usp47Q8BY87 Tnpo2-202ENSMUST00000166592 4884 ntAPPRIS P1 TSL 5 BASIC17.51■□□□□ 0.39
Usp47Q8BY87 Fam110a-202ENSMUST00000109863 1284 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Usp47Q8BY87 Gm14247-201ENSMUST00000120950 237 ntBASIC17.51■□□□□ 0.39
Usp47Q8BY87 Lsm2-207ENSMUST00000173004 870 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
Usp47Q8BY87 Gm4034-201ENSMUST00000187674 480 ntBASIC17.51■□□□□ 0.39
Usp47Q8BY87 Rps4l-202ENSMUST00000204242 789 ntBASIC17.51■□□□□ 0.39
Usp47Q8BY87 AC124171.1-201ENSMUST00000221151 567 ntTSL 5 BASIC17.51■□□□□ 0.39
Usp47Q8BY87 Prorsd1-201ENSMUST00000039900 918 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Usp47Q8BY87 Cryba2-201ENSMUST00000006721 720 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Usp47Q8BY87 Sprr2a2-202ENSMUST00000090871 722 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Usp47Q8BY87 Gm10308-201ENSMUST00000095183 742 ntAPPRIS P1 TSL 2 BASIC17.51■□□□□ 0.39
Usp47Q8BY87 Cd34-202ENSMUST00000110815 2554 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
Usp47Q8BY87 Evc2-201ENSMUST00000056365 4091 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Usp47Q8BY87 Mbp-205ENSMUST00000091789 4797 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
Usp47Q8BY87 Tcn2-201ENSMUST00000020710 1897 ntAPPRIS P1 TSL 5 BASIC17.5■□□□□ 0.39
Usp47Q8BY87 9330162012Rik-201ENSMUST00000154919 3836 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
Usp47Q8BY87 Dbf4-204ENSMUST00000168500 2000 ntTSL 5 BASIC17.5■□□□□ 0.39
Usp47Q8BY87 Gm37513-201ENSMUST00000194830 2268 ntBASIC17.5■□□□□ 0.39
Usp47Q8BY87 Gm38378-201ENSMUST00000195153 2268 ntBASIC17.5■□□□□ 0.39
Usp47Q8BY87 Arhgap11a-203ENSMUST00000110948 4878 ntAPPRIS ALT2 TSL 1 (best) BASIC17.5■□□□□ 0.39
Usp47Q8BY87 Zfp541-202ENSMUST00000209369 4879 ntAPPRIS P2 TSL 5 BASIC17.5■□□□□ 0.39
Usp47Q8BY87 Slc25a25-205ENSMUST00000113310 3278 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
Usp47Q8BY87 Orc2-201ENSMUST00000027198 3561 ntAPPRIS P4 TSL 1 (best) BASIC17.5■□□□□ 0.39
Usp47Q8BY87 Ssc5d-201ENSMUST00000057612 4348 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Usp47Q8BY87 Exoc6b-203ENSMUST00000160197 5439 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Usp47Q8BY87 Ncmap-202ENSMUST00000105857 958 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Usp47Q8BY87 Txlng-203ENSMUST00000112315 2525 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
Usp47Q8BY87 Tcf4-205ENSMUST00000114980 2192 ntAPPRIS P1 TSL 5 BASIC17.5■□□□□ 0.39
Usp47Q8BY87 Gm12217-201ENSMUST00000118858 696 ntBASIC17.5■□□□□ 0.39
Usp47Q8BY87 Gm13187-202ENSMUST00000133873 1321 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
Usp47Q8BY87 Sh2d6-203ENSMUST00000159877 1210 ntAPPRIS ALT2 TSL 1 (best) BASIC17.5■□□□□ 0.39
Usp47Q8BY87 Sh2d6-206ENSMUST00000162561 1251 ntAPPRIS P5 TSL 1 (best) BASIC17.5■□□□□ 0.39
Usp47Q8BY87 Sirt2-209ENSMUST00000170068 1585 ntTSL 5 BASIC17.5■□□□□ 0.39
Usp47Q8BY87 Gm27194-201ENSMUST00000175753 2936 ntBASIC17.5■□□□□ 0.39
Usp47Q8BY87 Ctnnb1-214ENSMUST00000178812 2702 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Usp47Q8BY87 Gm37131-201ENSMUST00000192502 1561 ntBASIC17.5■□□□□ 0.39
Usp47Q8BY87 Gm18711-201ENSMUST00000199341 750 ntBASIC17.5■□□□□ 0.39
Usp47Q8BY87 AY036118-201ENSMUST00000200021 923 ntBASIC17.5■□□□□ 0.39
Usp47Q8BY87 Olfr1347-205ENSMUST00000220413 964 ntBASIC17.5■□□□□ 0.39
Usp47Q8BY87 Chrna9-201ENSMUST00000031108 1843 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Usp47Q8BY87 Olfr1347-201ENSMUST00000036357 964 ntAPPRIS P1 BASIC17.5■□□□□ 0.39
Usp47Q8BY87 Ndufaf5-201ENSMUST00000044825 1166 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Usp47Q8BY87 3300002I08Rik-201ENSMUST00000051153 650 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Usp47Q8BY87 Gm5455-201ENSMUST00000058710 715 ntBASIC17.5■□□□□ 0.39
Usp47Q8BY87 4931429P17Rik-201ENSMUST00000061899 2012 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
Usp47Q8BY87 Serpina11-201ENSMUST00000074693 1447 ntAPPRIS P3 TSL 1 (best) BASIC17.5■□□□□ 0.39
Usp47Q8BY87 Ifi27-205ENSMUST00000085065 977 ntAPPRIS ALT2 TSL 1 (best) BASIC17.5■□□□□ 0.39
Usp47Q8BY87 Kars-202ENSMUST00000093120 2131 ntAPPRIS ALT2 TSL 1 (best) BASIC17.5■□□□□ 0.39
Usp47Q8BY87 Col1a2-201ENSMUST00000031668 5348 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Usp47Q8BY87 Frzb-201ENSMUST00000028389 3149 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Usp47Q8BY87 Crmp1-201ENSMUST00000031004 2906 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Usp47Q8BY87 Mfsd4a-204ENSMUST00000126927 2422 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
Usp47Q8BY87 Acbd5-208ENSMUST00000226571 3802 ntAPPRIS ALT2 BASIC17.49■□□□□ 0.39
Usp47Q8BY87 Trpm4-209ENSMUST00000211743 3673 ntAPPRIS ALT2 TSL 1 (best) BASIC17.49■□□□□ 0.39
Usp47Q8BY87 Rnh1-202ENSMUST00000167493 1656 ntAPPRIS P3 TSL 1 (best) BASIC17.49■□□□□ 0.39
Usp47Q8BY87 Rnh1-204ENSMUST00000210314 1658 ntAPPRIS ALT2 TSL 1 (best) BASIC17.49■□□□□ 0.39
Usp47Q8BY87 Serpinb12-202ENSMUST00000112724 1623 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Usp47Q8BY87 Tbc1d5-205ENSMUST00000224528 4764 ntAPPRIS ALT2 BASIC17.49■□□□□ 0.39
Usp47Q8BY87 Gm38355-201ENSMUST00000192514 1570 ntBASIC17.49■□□□□ 0.39
Usp47Q8BY87 AC154671.1-201ENSMUST00000228617 1578 ntBASIC17.49■□□□□ 0.39
Usp47Q8BY87 Rorc-204ENSMUST00000200009 1543 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
Usp47Q8BY87 Pdp1-203ENSMUST00000108297 4201 ntAPPRIS P3 TSL 1 (best) BASIC17.49■□□□□ 0.39
Usp47Q8BY87 Rpl9-204ENSMUST00000127874 2690 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
Usp47Q8BY87 Calu-202ENSMUST00000090481 2670 ntAPPRIS ALT1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Usp47Q8BY87 Gm29208-205ENSMUST00000214517 1056 ntTSL 5 BASIC17.49■□□□□ 0.39
Usp47Q8BY87 AC167229.2-201ENSMUST00000218902 675 ntTSL 5 BASIC17.49■□□□□ 0.39
Usp47Q8BY87 Ggps1-204ENSMUST00000221713 667 ntTSL 3 BASIC17.49■□□□□ 0.39
Usp47Q8BY87 Mettl6-204ENSMUST00000227595 1027 ntBASIC17.49■□□□□ 0.39
Usp47Q8BY87 Steap2-203ENSMUST00000115425 4550 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Usp47Q8BY87 Asl-202ENSMUST00000159619 2088 ntAPPRIS P1 TSL 5 BASIC17.49■□□□□ 0.39
Usp47Q8BY87 AL732309.1-201ENSMUST00000228627 2045 ntAPPRIS P1 BASIC17.49■□□□□ 0.39
Usp47Q8BY87 Lypd1-202ENSMUST00000159417 6464 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Usp47Q8BY87 Pmp22-204ENSMUST00000108702 1822 ntAPPRIS P1 TSL 3 BASIC17.48■□□□□ 0.39
Usp47Q8BY87 Lhfpl1-201ENSMUST00000040084 1830 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Usp47Q8BY87 Ddhd1-202ENSMUST00000087320 9820 ntAPPRIS ALT2 TSL 1 (best) BASIC17.48■□□□□ 0.39
Usp47Q8BY87 Tbc1d9b-201ENSMUST00000093138 4407 ntAPPRIS P3 TSL 1 (best) BASIC17.48■□□□□ 0.39
Usp47Q8BY87 Aptx-201ENSMUST00000030119 5250 ntAPPRIS ALT2 TSL 1 (best) BASIC17.48■□□□□ 0.39
Usp47Q8BY87 Gnaz-202ENSMUST00000159991 3331 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Usp47Q8BY87 0610037L13Rik-207ENSMUST00000125107 1551 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
Usp47Q8BY87 Ralgds-202ENSMUST00000100241 3102 ntAPPRIS ALT2 TSL 1 (best) BASIC17.48■□□□□ 0.39
Usp47Q8BY87 Aff2-201ENSMUST00000033532 4523 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Usp47Q8BY87 Celf2-225ENSMUST00000183091 2177 ntTSL 5 BASIC17.48■□□□□ 0.39
Usp47Q8BY87 CU062626.3-201ENSMUST00000225522 1411 ntBASIC17.48■□□□□ 0.39
Usp47Q8BY87 BC052040-203ENSMUST00000166472 2770 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
Usp47Q8BY87 1700003D09Rik-201ENSMUST00000141929 1389 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
Usp47Q8BY87 Tle3-204ENSMUST00000159386 4527 ntAPPRIS ALT2 TSL 5 BASIC17.48■□□□□ 0.39
Usp47Q8BY87 Ly6g6c-201ENSMUST00000173207 598 ntAPPRIS ALT2 TSL 3 BASIC17.48■□□□□ 0.39
Usp47Q8BY87 Ly6g6c-202ENSMUST00000173478 962 ntAPPRIS P2 TSL 1 (best) BASIC17.48■□□□□ 0.39
Usp47Q8BY87 Rps13-ps2-201ENSMUST00000182017 453 ntBASIC17.48■□□□□ 0.39
Usp47Q8BY87 Gm28450-201ENSMUST00000187349 638 ntBASIC17.48■□□□□ 0.39
Usp47Q8BY87 4930539M17Rik-201ENSMUST00000194792 846 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
Usp47Q8BY87 Gm45021-201ENSMUST00000204521 369 ntAPPRIS P1 TSL 5 BASIC17.48■□□□□ 0.39
Usp47Q8BY87 Abracl-204ENSMUST00000220110 768 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Usp47Q8BY87 4930578I06Rik-201ENSMUST00000022532 1033 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Retrieved 100 of 76,532 protein–RNA pairs in 38.9 ms