Protein–RNA interactions for Protein: Q8BGH2

Samm50, Sorting and assembly machinery component 50 homolog, mousemouse

Predictions only

Length 469 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Samm50Q8BGH2 Slc33a1-201ENSMUST00000029402 3150 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Samm50Q8BGH2 Gm23931-201ENSMUST00000103842 109 ntBASIC14.62□□□□□ -0.07
Samm50Q8BGH2 4930579D09Rik-201ENSMUST00000132321 469 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
Samm50Q8BGH2 Gm25927-201ENSMUST00000175058 117 ntBASIC14.62□□□□□ -0.07
Samm50Q8BGH2 1700015O11Rik-201ENSMUST00000180964 678 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
Samm50Q8BGH2 Gm9061-201ENSMUST00000182707 1006 ntBASIC14.62□□□□□ -0.07
Samm50Q8BGH2 Rfx7-205ENSMUST00000184015 1554 ntTSL 5 BASIC14.62□□□□□ -0.07
Samm50Q8BGH2 Gm26728-201ENSMUST00000185268 595 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
Samm50Q8BGH2 Gm5896-201ENSMUST00000189662 1024 ntBASIC14.62□□□□□ -0.07
Samm50Q8BGH2 Gm19184-201ENSMUST00000196798 928 ntBASIC14.62□□□□□ -0.07
Samm50Q8BGH2 Gm18916-201ENSMUST00000198264 1246 ntBASIC14.62□□□□□ -0.07
Samm50Q8BGH2 Gm4768-201ENSMUST00000206199 686 ntBASIC14.62□□□□□ -0.07
Samm50Q8BGH2 Msra-205ENSMUST00000210428 1180 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
Samm50Q8BGH2 Sit1-201ENSMUST00000030180 1228 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Samm50Q8BGH2 Dnaic2-202ENSMUST00000092469 2799 ntAPPRIS P1 TSL 5 BASIC14.62□□□□□ -0.07
Samm50Q8BGH2 Axl-202ENSMUST00000085948 3899 ntAPPRIS ALT2 TSL 1 (best) BASIC14.62□□□□□ -0.07
Samm50Q8BGH2 Wdfy2-201ENSMUST00000014691 6646 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Samm50Q8BGH2 Tmem63b-201ENSMUST00000113523 3284 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Samm50Q8BGH2 Ndrg2-201ENSMUST00000004673 2099 ntAPPRIS P3 TSL 1 (best) BASIC14.62□□□□□ -0.07
Samm50Q8BGH2 Fam177a-201ENSMUST00000177768 3922 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Samm50Q8BGH2 Tollip-204ENSMUST00000151890 1753 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
Samm50Q8BGH2 Cmtm6-201ENSMUST00000035007 3383 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Samm50Q8BGH2 Mroh5-202ENSMUST00000110021 2145 ntAPPRIS ALT2 TSL 1 (best) BASIC14.62□□□□□ -0.07
Samm50Q8BGH2 Wnt3-201ENSMUST00000000127 3076 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Samm50Q8BGH2 Lig3-202ENSMUST00000080461 3056 ntTSL 5 BASIC14.62□□□□□ -0.07
Samm50Q8BGH2 Gm5053-201ENSMUST00000208361 1678 ntBASIC14.61□□□□□ -0.07
Samm50Q8BGH2 Rbm12b2-201ENSMUST00000063839 3327 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Samm50Q8BGH2 Nek1-209ENSMUST00000211672 5109 ntAPPRIS ALT2 TSL 1 (best) BASIC14.61□□□□□ -0.07
Samm50Q8BGH2 4933417C20Rik-201ENSMUST00000193962 1874 ntBASIC14.61□□□□□ -0.07
Samm50Q8BGH2 Tmem237-202ENSMUST00000094917 1869 ntAPPRIS P4 TSL 1 (best) BASIC14.61□□□□□ -0.07
Samm50Q8BGH2 Vat1l-201ENSMUST00000049509 3666 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Samm50Q8BGH2 Samd4-202ENSMUST00000100672 4165 ntAPPRIS ALT2 TSL 1 (best) BASIC14.61□□□□□ -0.07
Samm50Q8BGH2 Setd3-202ENSMUST00000109879 2387 ntTSL 3 BASIC14.61□□□□□ -0.07
Samm50Q8BGH2 Zfp354c-202ENSMUST00000109135 5325 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Samm50Q8BGH2 Sgce-201ENSMUST00000004750 1703 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
Samm50Q8BGH2 Slitrk5-201ENSMUST00000042767 4831 ntAPPRIS P1 TSL 2 BASIC14.61□□□□□ -0.07
Samm50Q8BGH2 Lrguk-202ENSMUST00000101564 967 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
Samm50Q8BGH2 Pcp2-206ENSMUST00000144977 534 ntAPPRIS ALT2 TSL 3 BASIC14.61□□□□□ -0.07
Samm50Q8BGH2 Gm17208-201ENSMUST00000168388 535 ntBASIC14.61□□□□□ -0.07
Samm50Q8BGH2 Pyy-204ENSMUST00000177304 551 ntAPPRIS ALT2 TSL 2 BASIC14.61□□□□□ -0.07
Samm50Q8BGH2 Gm3893-201ENSMUST00000178882 909 ntAPPRIS P1 TSL 5 BASIC14.61□□□□□ -0.07
Samm50Q8BGH2 Gm26871-201ENSMUST00000180593 700 ntTSL 3 BASIC14.61□□□□□ -0.07
Samm50Q8BGH2 Crip2-202ENSMUST00000196015 772 ntTSL 3 BASIC14.61□□□□□ -0.07
Samm50Q8BGH2 Gm36634-201ENSMUST00000218356 1259 ntTSL 3 BASIC14.61□□□□□ -0.07
Samm50Q8BGH2 St13-201ENSMUST00000023039 1089 ntTSL 5 BASIC14.61□□□□□ -0.07
Samm50Q8BGH2 Mrto4-201ENSMUST00000030513 930 ntAPPRIS P3 TSL 1 (best) BASIC14.61□□□□□ -0.07
Samm50Q8BGH2 Bcdin3d-201ENSMUST00000040313 1271 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Samm50Q8BGH2 Ccdc113-201ENSMUST00000041569 1288 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Samm50Q8BGH2 Gemin7-201ENSMUST00000051364 763 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Samm50Q8BGH2 4930588K23Rik-201ENSMUST00000156827 1963 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
Samm50Q8BGH2 Trak1-213ENSMUST00000211439 3533 ntAPPRIS ALT2 TSL 1 (best) BASIC14.61□□□□□ -0.07
Samm50Q8BGH2 Ppara-203ENSMUST00000109423 2519 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Samm50Q8BGH2 Dnaic2-201ENSMUST00000069325 2874 ntAPPRIS P1 TSL 5 BASIC14.61□□□□□ -0.07
Samm50Q8BGH2 Myocd-201ENSMUST00000101042 2585 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
Samm50Q8BGH2 Rbm47-204ENSMUST00000113726 4703 ntAPPRIS P3 TSL 1 (best) BASIC14.61□□□□□ -0.07
Samm50Q8BGH2 F3-201ENSMUST00000029771 1872 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Samm50Q8BGH2 Col6a3-208ENSMUST00000188587 8285 ntTSL 5 BASIC14.61□□□□□ -0.07
Samm50Q8BGH2 Gm11766-201ENSMUST00000143428 3018 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
Samm50Q8BGH2 Ahi1-201ENSMUST00000105525 4851 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Samm50Q8BGH2 Usp16-201ENSMUST00000026710 3205 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Samm50Q8BGH2 Fitm2-201ENSMUST00000109418 3967 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Samm50Q8BGH2 Tnn-202ENSMUST00000131919 3987 ntTSL 5 BASIC14.6□□□□□ -0.07
Samm50Q8BGH2 Etv3-205ENSMUST00000170036 5127 ntAPPRIS P2 TSL 1 (best) BASIC14.6□□□□□ -0.07
Samm50Q8BGH2 Ticrr-201ENSMUST00000035977 7199 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Samm50Q8BGH2 Ccpg1-208ENSMUST00000150826 2939 ntAPPRIS ALT2 TSL 1 (best) BASIC14.6□□□□□ -0.07
Samm50Q8BGH2 Txndc5-203ENSMUST00000160653 2586 ntAPPRIS ALT2 TSL 1 (best) BASIC14.6□□□□□ -0.07
Samm50Q8BGH2 Mettl17-201ENSMUST00000047899 1623 ntAPPRIS P2 TSL 1 (best) BASIC14.6□□□□□ -0.07
Samm50Q8BGH2 AU022754-201ENSMUST00000180441 2976 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
Samm50Q8BGH2 Th-201ENSMUST00000000219 1829 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Samm50Q8BGH2 Rgs11-202ENSMUST00000122058 2005 ntAPPRIS ALT2 TSL 2 BASIC14.6□□□□□ -0.07
Samm50Q8BGH2 Nr3c1-201ENSMUST00000025300 4989 ntAPPRIS P2 TSL 1 (best) BASIC14.6□□□□□ -0.07
Samm50Q8BGH2 Pkig-203ENSMUST00000109400 1059 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Samm50Q8BGH2 Ict1os-201ENSMUST00000125653 1052 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
Samm50Q8BGH2 Gm11851-201ENSMUST00000132219 692 ntTSL 5 BASIC14.6□□□□□ -0.07
Samm50Q8BGH2 Ablim2-213ENSMUST00000150146 415 ntTSL 2 BASIC14.6□□□□□ -0.07
Samm50Q8BGH2 1700037C18Rik-205ENSMUST00000177323 915 ntAPPRIS ALT2 TSL 5 BASIC14.6□□□□□ -0.07
Samm50Q8BGH2 Gm28913-201ENSMUST00000186240 364 ntTSL 3 BASIC14.6□□□□□ -0.07
Samm50Q8BGH2 Gm44974-201ENSMUST00000206387 1279 ntBASIC14.6□□□□□ -0.07
Samm50Q8BGH2 Ambp-201ENSMUST00000030041 1268 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Samm50Q8BGH2 A430005L14Rik-201ENSMUST00000058393 1098 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Samm50Q8BGH2 Camk2d-216ENSMUST00000163226 4204 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
Samm50Q8BGH2 2810407A14Rik-201ENSMUST00000069809 1699 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
Samm50Q8BGH2 Nrf1-207ENSMUST00000115206 1879 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Samm50Q8BGH2 Prkar1b-202ENSMUST00000110889 2457 ntTSL 5 BASIC14.6□□□□□ -0.07
Samm50Q8BGH2 Psap-201ENSMUST00000004316 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC14.6□□□□□ -0.07
Samm50Q8BGH2 Ercc2-202ENSMUST00000108460 3485 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
Samm50Q8BGH2 Adck2-204ENSMUST00000140364 3542 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Samm50Q8BGH2 Snap23-203ENSMUST00000116437 2730 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
Samm50Q8BGH2 Olfr763-201ENSMUST00000077460 2523 ntAPPRIS P1 BASIC14.6□□□□□ -0.07
Samm50Q8BGH2 Chrnb2-201ENSMUST00000029562 6399 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Samm50Q8BGH2 Gabrg3-201ENSMUST00000068394 1724 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
Samm50Q8BGH2 6030458C11Rik-201ENSMUST00000057256 3966 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Samm50Q8BGH2 Pygo1-201ENSMUST00000038489 7916 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Samm50Q8BGH2 Gm8206-201ENSMUST00000164139 1956 ntTSL 5 BASIC14.6□□□□□ -0.07
Samm50Q8BGH2 Gm43858-201ENSMUST00000199418 1778 ntBASIC14.6□□□□□ -0.07
Samm50Q8BGH2 Atp1b2-201ENSMUST00000047889 2842 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Samm50Q8BGH2 Pou5f2-201ENSMUST00000175955 1394 ntAPPRIS P1 BASIC14.6□□□□□ -0.07
Samm50Q8BGH2 Adam32-201ENSMUST00000119720 2235 ntAPPRIS ALT2 TSL 1 (best) BASIC14.6□□□□□ -0.07
Samm50Q8BGH2 Gm10544-201ENSMUST00000180516 2239 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
Samm50Q8BGH2 Lig1-201ENSMUST00000098814 3091 ntAPPRIS P1 TSL 5 BASIC14.6□□□□□ -0.07
Retrieved 100 of 76,532 protein–RNA pairs in 47.9 ms