Protein–RNA interactions for Protein: Q8BFW4

Trim65, Tripartite motif-containing protein 65, mousemouse

Predictions only

Length 522 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim65Q8BFW4 Endou-201ENSMUST00000023105 2404 ntAPPRIS P3 TSL 1 (best) BASIC13.35□□□□□ -0.27
Trim65Q8BFW4 Rab11fip1-202ENSMUST00000054212 7965 ntAPPRIS P3 TSL 5 BASIC13.35□□□□□ -0.27
Trim65Q8BFW4 Gm42480-201ENSMUST00000198434 2595 ntBASIC13.35□□□□□ -0.27
Trim65Q8BFW4 Rnf10-201ENSMUST00000040555 3106 ntAPPRIS ALT2 TSL 1 (best) BASIC13.35□□□□□ -0.27
Trim65Q8BFW4 Pde4d-205ENSMUST00000119507 2163 ntTSL 5 BASIC13.35□□□□□ -0.27
Trim65Q8BFW4 Vit-201ENSMUST00000024880 2720 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Trim65Q8BFW4 Dhx57-202ENSMUST00000086555 5077 ntAPPRIS ALT2 TSL 1 (best) BASIC13.35□□□□□ -0.27
Trim65Q8BFW4 Gm26678-201ENSMUST00000181057 3025 ntTSL 5 BASIC13.35□□□□□ -0.27
Trim65Q8BFW4 D630033O11Rik-204ENSMUST00000210588 1358 ntTSL 5 BASIC13.35□□□□□ -0.27
Trim65Q8BFW4 BC024139-201ENSMUST00000054022 2623 ntAPPRIS P2 TSL 1 (best) BASIC13.35□□□□□ -0.27
Trim65Q8BFW4 Plpbp-201ENSMUST00000033875 3603 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Trim65Q8BFW4 Plekhg2-203ENSMUST00000121085 4649 ntAPPRIS ALT2 TSL 2 BASIC13.35□□□□□ -0.27
Trim65Q8BFW4 Ank3-201ENSMUST00000047061 2517 ntTSL 5 BASIC13.35□□□□□ -0.27
Trim65Q8BFW4 Spsb1-202ENSMUST00000105684 1002 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Trim65Q8BFW4 Upk3bl-202ENSMUST00000111137 1119 ntAPPRIS ALT2 TSL 1 (best) BASIC13.35□□□□□ -0.27
Trim65Q8BFW4 Mir1247-201ENSMUST00000116706 82 ntBASIC13.35□□□□□ -0.27
Trim65Q8BFW4 D630024D03Rik-201ENSMUST00000126265 720 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
Trim65Q8BFW4 Atp6v0e-201ENSMUST00000015719 794 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Trim65Q8BFW4 Gm18304-201ENSMUST00000189162 546 ntBASIC13.35□□□□□ -0.27
Trim65Q8BFW4 Gm38158-201ENSMUST00000194617 339 ntBASIC13.35□□□□□ -0.27
Trim65Q8BFW4 Gm6007-201ENSMUST00000208170 823 ntBASIC13.35□□□□□ -0.27
Trim65Q8BFW4 Kdelr1-203ENSMUST00000211234 832 ntTSL 2 BASIC13.35□□□□□ -0.27
Trim65Q8BFW4 AC112680.3-201ENSMUST00000215297 488 ntTSL 3 BASIC13.35□□□□□ -0.27
Trim65Q8BFW4 4930447A16Rik-201ENSMUST00000022897 587 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Trim65Q8BFW4 Gm24136-201ENSMUST00000083374 165 ntBASIC13.35□□□□□ -0.27
Trim65Q8BFW4 Cryba4-201ENSMUST00000086629 746 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Trim65Q8BFW4 Terf2ip-201ENSMUST00000052138 3560 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Trim65Q8BFW4 Ms4a15-201ENSMUST00000087923 1713 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Trim65Q8BFW4 Cct5-201ENSMUST00000022842 1853 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Trim65Q8BFW4 Nek3-201ENSMUST00000033865 2021 ntAPPRIS P3 TSL 1 (best) BASIC13.35□□□□□ -0.27
Trim65Q8BFW4 D230017M19Rik-201ENSMUST00000180722 3096 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
Trim65Q8BFW4 Rps13-203ENSMUST00000205490 1317 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
Trim65Q8BFW4 Serinc2-202ENSMUST00000120126 1452 ntAPPRIS ALT2 TSL 5 BASIC13.35□□□□□ -0.27
Trim65Q8BFW4 Gm29052-201ENSMUST00000187700 1451 ntTSL 5 BASIC13.35□□□□□ -0.27
Trim65Q8BFW4 D730001G18Rik-202ENSMUST00000191407 1494 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Trim65Q8BFW4 Sp4-203ENSMUST00000222314 2677 ntAPPRIS P2 TSL 1 (best) BASIC13.35□□□□□ -0.27
Trim65Q8BFW4 Cstf3-201ENSMUST00000028599 2817 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Trim65Q8BFW4 Matn2-203ENSMUST00000226766 3252 ntBASIC13.35□□□□□ -0.27
Trim65Q8BFW4 Pcdh8-204ENSMUST00000195355 3704 ntAPPRIS ALT2 TSL 1 (best) BASIC13.35□□□□□ -0.27
Trim65Q8BFW4 Olfr95-202ENSMUST00000216318 4917 ntAPPRIS P1 TSL 5 BASIC13.35□□□□□ -0.27
Trim65Q8BFW4 Lzts3-201ENSMUST00000045761 4201 ntAPPRIS P3 TSL 5 BASIC13.34□□□□□ -0.27
Trim65Q8BFW4 Olfr707-203ENSMUST00000210644 1817 ntAPPRIS P1 TSL 3 BASIC13.34□□□□□ -0.27
Trim65Q8BFW4 Chchd3-202ENSMUST00000115091 1363 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
Trim65Q8BFW4 2610507I01Rik-201ENSMUST00000154354 1360 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
Trim65Q8BFW4 Cnmd-203ENSMUST00000165835 1362 ntAPPRIS ALT2 TSL 1 (best) BASIC13.34□□□□□ -0.27
Trim65Q8BFW4 Grk4-202ENSMUST00000074651 3234 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
Trim65Q8BFW4 Bicd1-202ENSMUST00000086829 9667 ntAPPRIS P2 TSL 1 (best) BASIC13.34□□□□□ -0.27
Trim65Q8BFW4 Cyth1-201ENSMUST00000017276 3135 ntAPPRIS ALT1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Trim65Q8BFW4 Gabrg3-202ENSMUST00000068911 9767 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Trim65Q8BFW4 Gtf2ird1-202ENSMUST00000074114 3330 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
Trim65Q8BFW4 Ighv8-9-201ENSMUST00000103533 301 ntAPPRIS P1 BASIC13.34□□□□□ -0.27
Trim65Q8BFW4 Ighv8-13-201ENSMUST00000103542 303 ntAPPRIS ALT2 BASIC13.34□□□□□ -0.27
Trim65Q8BFW4 Pin4-201ENSMUST00000113627 489 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Trim65Q8BFW4 Gm12314-201ENSMUST00000118104 538 ntBASIC13.34□□□□□ -0.27
Trim65Q8BFW4 Gm13342-201ENSMUST00000121055 207 ntBASIC13.34□□□□□ -0.27
Trim65Q8BFW4 Fuom-203ENSMUST00000121115 872 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
Trim65Q8BFW4 Gm16302-201ENSMUST00000159268 428 ntTSL 3 BASIC13.34□□□□□ -0.27
Trim65Q8BFW4 Gm17420-201ENSMUST00000164753 153 ntBASIC13.34□□□□□ -0.27
Trim65Q8BFW4 Pcgf1-202ENSMUST00000165164 918 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Trim65Q8BFW4 Sox2ot-205ENSMUST00000196795 754 ntTSL 3 BASIC13.34□□□□□ -0.27
Trim65Q8BFW4 Rfxank-203ENSMUST00000212320 1121 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
Trim65Q8BFW4 Timm9-203ENSMUST00000220482 859 ntAPPRIS P1 TSL 3 BASIC13.34□□□□□ -0.27
Trim65Q8BFW4 AC125209.1-201ENSMUST00000225812 766 ntBASIC13.34□□□□□ -0.27
Trim65Q8BFW4 4930442H23Rik-201ENSMUST00000056086 1245 ntAPPRIS P1 BASIC13.34□□□□□ -0.27
Trim65Q8BFW4 Spaca4-201ENSMUST00000094424 707 ntAPPRIS P1 BASIC13.34□□□□□ -0.27
Trim65Q8BFW4 Fbf1-202ENSMUST00000106435 4651 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Trim65Q8BFW4 Ppp2r2b-202ENSMUST00000117687 2271 ntAPPRIS ALT1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Trim65Q8BFW4 Colgalt2-201ENSMUST00000044311 4093 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Trim65Q8BFW4 Sowahb-201ENSMUST00000061328 3900 ntAPPRIS P1 BASIC13.34□□□□□ -0.27
Trim65Q8BFW4 Prss30-201ENSMUST00000024936 1470 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Trim65Q8BFW4 2310026I22Rik-201ENSMUST00000180941 1300 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
Trim65Q8BFW4 Rab17-201ENSMUST00000027529 1831 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Trim65Q8BFW4 Akr1d1-201ENSMUST00000040987 2699 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Trim65Q8BFW4 Cpped1-202ENSMUST00000096272 2663 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Trim65Q8BFW4 Lsp1-201ENSMUST00000018963 1695 ntAPPRIS ALT2 TSL 1 (best) BASIC13.34□□□□□ -0.27
Trim65Q8BFW4 Wdr59-201ENSMUST00000034437 4896 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
Trim65Q8BFW4 Rbm20-204ENSMUST00000164202 6592 ntAPPRIS P1 TSL 5 BASIC13.34□□□□□ -0.27
Trim65Q8BFW4 Etf1-201ENSMUST00000025218 3709 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Trim65Q8BFW4 Mgme1-202ENSMUST00000110027 2359 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Trim65Q8BFW4 Ap5b1-201ENSMUST00000096318 3092 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.27
Trim65Q8BFW4 Dppa4-201ENSMUST00000050705 1378 ntAPPRIS ALT2 TSL 5 BASIC13.33□□□□□ -0.27
Trim65Q8BFW4 Nif3l1-206ENSMUST00000171597 2098 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.27
Trim65Q8BFW4 Tmcc2-206ENSMUST00000142609 2769 ntAPPRIS ALT2 TSL 1 (best) BASIC13.33□□□□□ -0.27
Trim65Q8BFW4 Dnmbp-205ENSMUST00000212396 6100 ntAPPRIS P2 TSL 5 BASIC13.33□□□□□ -0.28
Trim65Q8BFW4 Cyp4f39-201ENSMUST00000003413 1599 ntAPPRIS P1 TSL 5 BASIC13.33□□□□□ -0.28
Trim65Q8BFW4 Tonsl-207ENSMUST00000168185 4235 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
Trim65Q8BFW4 Sh2b1-206ENSMUST00000205889 3011 ntAPPRIS ALT2 TSL 1 (best) BASIC13.33□□□□□ -0.28
Trim65Q8BFW4 Tfe3-205ENSMUST00000115678 2658 ntTSL 5 BASIC13.33□□□□□ -0.28
Trim65Q8BFW4 Mynn-202ENSMUST00000192715 5555 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Trim65Q8BFW4 Wdr66-202ENSMUST00000121964 4873 ntAPPRIS P1 TSL 5 BASIC13.33□□□□□ -0.28
Trim65Q8BFW4 Pcdhga9-201ENSMUST00000091935 4724 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Trim65Q8BFW4 Tnfrsf18-202ENSMUST00000103173 1189 ntAPPRIS P4 TSL 1 (best) BASIC13.33□□□□□ -0.28
Trim65Q8BFW4 Tpm1-207ENSMUST00000113687 962 ntTSL 5 BASIC13.33□□□□□ -0.28
Trim65Q8BFW4 Tspan4-202ENSMUST00000117634 1281 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Trim65Q8BFW4 1700012C08Rik-201ENSMUST00000141554 363 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
Trim65Q8BFW4 Pisd-ps1-203ENSMUST00000145164 789 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
Trim65Q8BFW4 Snhg9-201ENSMUST00000161706 183 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
Trim65Q8BFW4 1700069L16Rik-203ENSMUST00000162388 706 ntAPPRIS ALT2 TSL 1 (best) BASIC13.33□□□□□ -0.28
Trim65Q8BFW4 4933436H12Rik-201ENSMUST00000207304 658 ntTSL 5 BASIC13.33□□□□□ -0.28
Trim65Q8BFW4 Gm39404-201ENSMUST00000216350 313 ntBASIC13.33□□□□□ -0.28
Retrieved 100 of 76,532 protein–RNA pairs in 70.8 ms