Protein–RNA interactions for Protein: Q80W14

Prpf40b, Pre-mRNA-processing factor 40 homolog B, mousemouse

Predictions only

Length 870 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Prpf40bQ80W14 Gm10961-201ENSMUST00000106703 144 ntAPPRIS P1 TSL 5 BASIC14.42□□□□□ -0.1
Prpf40bQ80W14 Igfbp2-202ENSMUST00000120564 991 ntTSL 3 BASIC14.42□□□□□ -0.1
Prpf40bQ80W14 Gm15891-201ENSMUST00000127307 611 ntTSL 5 BASIC14.42□□□□□ -0.1
Prpf40bQ80W14 Snhg17-206ENSMUST00000152125 1046 ntTSL 3 BASIC14.42□□□□□ -0.1
Prpf40bQ80W14 Gm7003-201ENSMUST00000195089 312 ntBASIC14.42□□□□□ -0.1
Prpf40bQ80W14 Gm43050-201ENSMUST00000201062 338 ntTSL 2 BASIC14.42□□□□□ -0.1
Prpf40bQ80W14 Gm21057-202ENSMUST00000206111 512 ntTSL 2 BASIC14.42□□□□□ -0.1
Prpf40bQ80W14 Gm44551-201ENSMUST00000208804 171 ntBASIC14.42□□□□□ -0.1
Prpf40bQ80W14 Gm45433-201ENSMUST00000209386 247 ntBASIC14.42□□□□□ -0.1
Prpf40bQ80W14 Gm42067-201ENSMUST00000209642 647 ntTSL 2 BASIC14.42□□□□□ -0.1
Prpf40bQ80W14 Riiad1-201ENSMUST00000029785 630 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Prpf40bQ80W14 Asb9-201ENSMUST00000033756 1139 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Prpf40bQ80W14 Shank2-203ENSMUST00000105902 8988 ntAPPRIS P1 TSL 5 BASIC14.42□□□□□ -0.1
Prpf40bQ80W14 AC117194.1-201ENSMUST00000224847 3002 ntBASIC14.42□□□□□ -0.1
Prpf40bQ80W14 Ficd-201ENSMUST00000065698 3133 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Prpf40bQ80W14 Kdm5c-203ENSMUST00000112588 6449 ntAPPRIS P2 TSL 1 (best) BASIC14.42□□□□□ -0.1
Prpf40bQ80W14 Dcaf7-201ENSMUST00000058438 5750 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Prpf40bQ80W14 Bcl11a-202ENSMUST00000109514 5989 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Prpf40bQ80W14 Cops4-201ENSMUST00000045993 1755 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Prpf40bQ80W14 Rnps1-201ENSMUST00000088512 1798 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Prpf40bQ80W14 Daglb-201ENSMUST00000045593 4651 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Prpf40bQ80W14 Tspan1-201ENSMUST00000030465 1985 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Prpf40bQ80W14 Gm8228-201ENSMUST00000189949 2192 ntBASIC14.41□□□□□ -0.1
Prpf40bQ80W14 Kif1c-204ENSMUST00000137119 6596 ntAPPRIS P2 TSL 5 BASIC14.41□□□□□ -0.1
Prpf40bQ80W14 Kif13a-201ENSMUST00000056978 6866 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Prpf40bQ80W14 Rbm11-203ENSMUST00000114253 2699 ntAPPRIS P2 TSL 1 (best) BASIC14.41□□□□□ -0.1
Prpf40bQ80W14 Mest-202ENSMUST00000124665 2665 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Prpf40bQ80W14 Tepsin-201ENSMUST00000026442 2752 ntAPPRIS ALT2 TSL 1 (best) BASIC14.41□□□□□ -0.1
Prpf40bQ80W14 Gm10392-201ENSMUST00000100807 1732 ntAPPRIS P1 TSL 2 BASIC14.41□□□□□ -0.1
Prpf40bQ80W14 Gm45495-201ENSMUST00000200940 1700 ntBASIC14.41□□□□□ -0.1
Prpf40bQ80W14 Eya1-201ENSMUST00000027066 4347 ntAPPRIS P1 TSL 5 BASIC14.41□□□□□ -0.1
Prpf40bQ80W14 Acadl-201ENSMUST00000027153 1916 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Prpf40bQ80W14 Zfp248-205ENSMUST00000161519 2243 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Prpf40bQ80W14 Tcf4-249ENSMUST00000202435 2427 ntTSL 5 BASIC14.41□□□□□ -0.1
Prpf40bQ80W14 Cstl1-202ENSMUST00000109954 454 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Prpf40bQ80W14 Sumo2-203ENSMUST00000117589 987 ntTSL 3 BASIC14.41□□□□□ -0.1
Prpf40bQ80W14 Retn-201ENSMUST00000012849 874 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Prpf40bQ80W14 Hcfc1r1-203ENSMUST00000180140 693 ntAPPRIS P2 TSL 2 BASIC14.41□□□□□ -0.1
Prpf40bQ80W14 Gm29707-202ENSMUST00000198744 659 ntTSL 3 BASIC14.41□□□□□ -0.1
Prpf40bQ80W14 Gm4598-201ENSMUST00000206756 1080 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Prpf40bQ80W14 Acsm5-207ENSMUST00000207813 1084 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Prpf40bQ80W14 Olfr398-201ENSMUST00000053874 945 ntAPPRIS P1 BASIC14.41□□□□□ -0.1
Prpf40bQ80W14 Krtap19-1-201ENSMUST00000081334 493 ntAPPRIS P1 BASIC14.41□□□□□ -0.1
Prpf40bQ80W14 Gm8798-201ENSMUST00000211877 1661 ntBASIC14.41□□□□□ -0.1
Prpf40bQ80W14 AC241621.2-201ENSMUST00000223991 2151 ntBASIC14.41□□□□□ -0.1
Prpf40bQ80W14 Acin1-202ENSMUST00000022794 2365 ntAPPRIS ALT2 TSL 5 BASIC14.41□□□□□ -0.1
Prpf40bQ80W14 Flcn-202ENSMUST00000091246 2768 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Prpf40bQ80W14 Vcl-201ENSMUST00000022369 5267 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Prpf40bQ80W14 Bach2-202ENSMUST00000108180 8882 ntAPPRIS P2 TSL 5 BASIC14.41□□□□□ -0.1
Prpf40bQ80W14 Lmf2-201ENSMUST00000023283 2906 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Prpf40bQ80W14 Dnm2-206ENSMUST00000172482 2613 ntAPPRIS P4 TSL 5 BASIC14.41□□□□□ -0.1
Prpf40bQ80W14 Stx3-203ENSMUST00000075304 2430 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Prpf40bQ80W14 Gm26519-201ENSMUST00000181193 2249 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Prpf40bQ80W14 Gm44414-201ENSMUST00000203660 2109 ntBASIC14.41□□□□□ -0.1
Prpf40bQ80W14 Tpm3-rs7-201ENSMUST00000072359 2147 ntAPPRIS P1 BASIC14.41□□□□□ -0.1
Prpf40bQ80W14 Mrap2-201ENSMUST00000049457 1931 ntAPPRIS P1 TSL 3 BASIC14.41□□□□□ -0.1
Prpf40bQ80W14 Trp53-202ENSMUST00000108657 1822 ntAPPRIS ALT2 TSL 1 (best) BASIC14.41□□□□□ -0.1
Prpf40bQ80W14 Ptprk-203ENSMUST00000218359 4669 ntAPPRIS ALT2 TSL 1 (best) BASIC14.41□□□□□ -0.1
Prpf40bQ80W14 Spatc1l-201ENSMUST00000009259 1332 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Prpf40bQ80W14 Mlh1-201ENSMUST00000035079 2754 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Prpf40bQ80W14 Kcnj12-203ENSMUST00000108717 2463 ntAPPRIS P3 TSL 1 (best) BASIC14.4□□□□□ -0.1
Prpf40bQ80W14 Washc5-201ENSMUST00000022976 4033 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Prpf40bQ80W14 Cops7b-202ENSMUST00000121534 5383 ntAPPRIS P1 TSL 5 BASIC14.4□□□□□ -0.1
Prpf40bQ80W14 Lzts3-202ENSMUST00000089561 4169 ntAPPRIS P3 TSL 5 BASIC14.4□□□□□ -0.1
Prpf40bQ80W14 Ddx39b-202ENSMUST00000172549 1770 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Prpf40bQ80W14 C77080-203ENSMUST00000106051 5049 ntAPPRIS ALT2 TSL 1 (best) BASIC14.4□□□□□ -0.1
Prpf40bQ80W14 Gm5592-202ENSMUST00000206490 2623 ntAPPRIS P1 TSL 5 BASIC14.4□□□□□ -0.1
Prpf40bQ80W14 Capn9-201ENSMUST00000093033 2330 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Prpf40bQ80W14 Tmem206-201ENSMUST00000027940 2246 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Prpf40bQ80W14 Copb2-201ENSMUST00000035033 3050 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Prpf40bQ80W14 Urad-201ENSMUST00000100433 766 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Prpf40bQ80W14 Gm6890-201ENSMUST00000114117 776 ntAPPRIS P1 TSL 5 BASIC14.4□□□□□ -0.1
Prpf40bQ80W14 Gm8194-201ENSMUST00000159783 859 ntBASIC14.4□□□□□ -0.1
Prpf40bQ80W14 Gm17040-202ENSMUST00000170597 889 ntBASIC14.4□□□□□ -0.1
Prpf40bQ80W14 Gm45219-201ENSMUST00000205602 465 ntBASIC14.4□□□□□ -0.1
Prpf40bQ80W14 Gm44968-201ENSMUST00000207652 1171 ntTSL 5 BASIC14.4□□□□□ -0.1
Prpf40bQ80W14 Gm35082-202ENSMUST00000208164 525 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Prpf40bQ80W14 Gm45338-203ENSMUST00000210371 1009 ntTSL 5 BASIC14.4□□□□□ -0.1
Prpf40bQ80W14 Gm34466-201ENSMUST00000222218 505 ntTSL 2 BASIC14.4□□□□□ -0.1
Prpf40bQ80W14 Pf4-201ENSMUST00000031320 588 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Prpf40bQ80W14 C1qb-201ENSMUST00000046384 1088 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Prpf40bQ80W14 Gm42957-201ENSMUST00000137564 3624 ntAPPRIS P1 TSL 2 BASIC14.4□□□□□ -0.1
Prpf40bQ80W14 Zfp142-203ENSMUST00000113737 7473 ntAPPRIS P3 TSL 1 (best) BASIC14.4□□□□□ -0.1
Prpf40bQ80W14 Msh4-201ENSMUST00000005630 3325 ntAPPRIS P3 TSL 1 (best) BASIC14.4□□□□□ -0.1
Prpf40bQ80W14 Gcom1-201ENSMUST00000163998 1726 ntAPPRIS P5 TSL 5 BASIC14.4□□□□□ -0.1
Prpf40bQ80W14 Gm33543-203ENSMUST00000211096 1722 ntAPPRIS P5 TSL 5 BASIC14.4□□□□□ -0.1
Prpf40bQ80W14 Zmiz1os1-201ENSMUST00000156682 3469 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Prpf40bQ80W14 Adamtsl4-202ENSMUST00000117782 4036 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Prpf40bQ80W14 Rnf17-202ENSMUST00000223627 2077 ntBASIC14.4□□□□□ -0.1
Prpf40bQ80W14 Chodl-202ENSMUST00000069148 2051 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Prpf40bQ80W14 Dennd2d-201ENSMUST00000029508 4050 ntAPPRIS ALT2 TSL 1 (best) BASIC14.4□□□□□ -0.1
Prpf40bQ80W14 Osgepl1-201ENSMUST00000027265 1868 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Prpf40bQ80W14 Srl-201ENSMUST00000023161 5000 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Prpf40bQ80W14 Ctgf-203ENSMUST00000176228 2490 ntTSL 2 BASIC14.39□□□□□ -0.11
Prpf40bQ80W14 Fancc-218ENSMUST00000220684 2006 ntTSL 5 BASIC14.39□□□□□ -0.11
Prpf40bQ80W14 Cpa1-201ENSMUST00000031806 1583 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Prpf40bQ80W14 Oraov1-201ENSMUST00000033388 2015 ntAPPRIS P3 TSL 1 (best) BASIC14.39□□□□□ -0.11
Prpf40bQ80W14 A230072I06Rik-201ENSMUST00000098935 1839 ntAPPRIS P1 BASIC14.39□□□□□ -0.11
Prpf40bQ80W14 Ap3m2-201ENSMUST00000163739 3417 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Prpf40bQ80W14 Eif5b-201ENSMUST00000027252 7797 ntAPPRIS P1 TSL 2 BASIC14.39□□□□□ -0.11
Retrieved 100 of 76,532 protein–RNA pairs in 27.5 ms