Protein–RNA interactions for Protein: Q6PFE3

Rad54b, DNA repair and recombination protein RAD54B, mousemouse

Predictions only

Length 886 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rad54bQ6PFE3 Alkbh2-202ENSMUST00000112279 899 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Rad54bQ6PFE3 Oprm1-229ENSMUST00000152674 1179 ntTSL 3 BASIC12.56□□□□□ -0.4
Rad54bQ6PFE3 Gm27486-201ENSMUST00000184923 80 ntBASIC12.56□□□□□ -0.4
Rad54bQ6PFE3 Dnm3os-203ENSMUST00000185878 557 ntTSL 5 BASIC12.56□□□□□ -0.4
Rad54bQ6PFE3 Sox2ot-207ENSMUST00000196987 727 ntTSL 3 BASIC12.56□□□□□ -0.4
Rad54bQ6PFE3 Gm4598-201ENSMUST00000206756 1080 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Rad54bQ6PFE3 4921530L21Rik-201ENSMUST00000045892 1161 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Rad54bQ6PFE3 Sprr2a2-202ENSMUST00000090871 722 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Rad54bQ6PFE3 Zc3hc1-210ENSMUST00000152391 1673 ntTSL 5 BASIC12.56□□□□□ -0.4
Rad54bQ6PFE3 AC154404.1-201ENSMUST00000223601 2077 ntBASIC12.56□□□□□ -0.4
Rad54bQ6PFE3 Calu-202ENSMUST00000090481 2670 ntAPPRIS ALT1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Rad54bQ6PFE3 Gm11494-201ENSMUST00000142279 1738 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Rad54bQ6PFE3 Dusp26-203ENSMUST00000161713 1524 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Rad54bQ6PFE3 Gm37827-201ENSMUST00000194486 1542 ntBASIC12.56□□□□□ -0.4
Rad54bQ6PFE3 Eif4enif1-204ENSMUST00000120721 2952 ntTSL 5 BASIC12.56□□□□□ -0.4
Rad54bQ6PFE3 Tmem181a-201ENSMUST00000088940 4405 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Rad54bQ6PFE3 Zfp810-201ENSMUST00000086278 3238 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Rad54bQ6PFE3 Tmem159-202ENSMUST00000118737 1395 ntAPPRIS P1 TSL 5 BASIC12.56□□□□□ -0.4
Rad54bQ6PFE3 Wdr20rt-201ENSMUST00000046331 2228 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Rad54bQ6PFE3 Slc31a2-201ENSMUST00000084530 1820 ntAPPRIS P3 TSL 1 (best) BASIC12.55□□□□□ -0.4
Rad54bQ6PFE3 Shtn1-202ENSMUST00000163821 3767 ntAPPRIS ALT2 TSL 1 (best) BASIC12.55□□□□□ -0.4
Rad54bQ6PFE3 Dcaf7-201ENSMUST00000058438 5750 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Rad54bQ6PFE3 Cib2-201ENSMUST00000041901 1433 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Rad54bQ6PFE3 Nlrc3-203ENSMUST00000177551 5403 ntAPPRIS P1 TSL 2 BASIC12.55□□□□□ -0.4
Rad54bQ6PFE3 1700030J22Rik-202ENSMUST00000213068 1482 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Rad54bQ6PFE3 Spata20-201ENSMUST00000041705 2627 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Rad54bQ6PFE3 Iqcc-201ENSMUST00000046675 2639 ntAPPRIS P2 TSL 2 BASIC12.55□□□□□ -0.4
Rad54bQ6PFE3 Fam126a-203ENSMUST00000115109 2195 ntTSL 5 BASIC12.55□□□□□ -0.4
Rad54bQ6PFE3 9330199G10Rik-202ENSMUST00000221607 1728 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Rad54bQ6PFE3 Nsg2-203ENSMUST00000109409 641 ntTSL 2 BASIC12.55□□□□□ -0.4
Rad54bQ6PFE3 Gm13315-201ENSMUST00000120376 991 ntBASIC12.55□□□□□ -0.4
Rad54bQ6PFE3 Gm11597-201ENSMUST00000121423 964 ntBASIC12.55□□□□□ -0.4
Rad54bQ6PFE3 Gm11261-203ENSMUST00000132470 838 ntTSL 5 BASIC12.55□□□□□ -0.4
Rad54bQ6PFE3 Pfdn6-204ENSMUST00000174048 560 ntAPPRIS P1 TSL 2 BASIC12.55□□□□□ -0.4
Rad54bQ6PFE3 Gm4034-201ENSMUST00000187674 480 ntBASIC12.55□□□□□ -0.4
Rad54bQ6PFE3 Gm42442-201ENSMUST00000197951 1133 ntBASIC12.55□□□□□ -0.4
Rad54bQ6PFE3 Dera-204ENSMUST00000203216 688 ntTSL 5 BASIC12.55□□□□□ -0.4
Rad54bQ6PFE3 Gm35549-203ENSMUST00000204619 644 ntAPPRIS P1 TSL 5 BASIC12.55□□□□□ -0.4
Rad54bQ6PFE3 Cartpt-201ENSMUST00000022150 827 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Rad54bQ6PFE3 Cartpt-202ENSMUST00000224142 1238 ntAPPRIS P1 BASIC12.55□□□□□ -0.4
Rad54bQ6PFE3 Dmac1-201ENSMUST00000030103 741 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Rad54bQ6PFE3 Mrps17-201ENSMUST00000042191 832 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Rad54bQ6PFE3 Spaca4-201ENSMUST00000094424 707 ntAPPRIS P1 BASIC12.55□□□□□ -0.4
Rad54bQ6PFE3 Pml-211ENSMUST00000153820 2652 ntAPPRIS ALT2 TSL 1 (best) BASIC12.55□□□□□ -0.4
Rad54bQ6PFE3 Gm2822-201ENSMUST00000164299 2910 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Rad54bQ6PFE3 Iqsec3-203ENSMUST00000151397 8067 ntTSL 2 BASIC12.55□□□□□ -0.4
Rad54bQ6PFE3 Plekhg2-202ENSMUST00000119990 4880 ntAPPRIS ALT2 TSL 1 (best) BASIC12.55□□□□□ -0.4
Rad54bQ6PFE3 Vamp1-203ENSMUST00000100942 3011 ntAPPRIS ALT1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Rad54bQ6PFE3 Ppnr-201ENSMUST00000190974 3525 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Rad54bQ6PFE3 Tle1-201ENSMUST00000030095 2569 ntTSL 5 BASIC12.55□□□□□ -0.4
Rad54bQ6PFE3 Ptger4-202ENSMUST00000120563 3312 ntAPPRIS ALT2 TSL 1 (best) BASIC12.55□□□□□ -0.4
Rad54bQ6PFE3 Ankrd17-201ENSMUST00000014421 10458 ntAPPRIS P4 TSL 5 BASIC12.55□□□□□ -0.4
Rad54bQ6PFE3 Pik3cd-203ENSMUST00000105689 3132 ntAPPRIS ALT1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Rad54bQ6PFE3 Myo18a-221ENSMUST00000167856 6132 ntTSL 5 BASIC12.55□□□□□ -0.4
Rad54bQ6PFE3 Gm26703-201ENSMUST00000181370 2864 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Rad54bQ6PFE3 Tcf4-254ENSMUST00000202674 2615 ntTSL 5 BASIC12.55□□□□□ -0.4
Rad54bQ6PFE3 Esco2-201ENSMUST00000022613 2913 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Rad54bQ6PFE3 Slc44a1-204ENSMUST00000107647 2176 ntTSL 2 BASIC12.54□□□□□ -0.4
Rad54bQ6PFE3 Tardbp-204ENSMUST00000105699 1904 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Rad54bQ6PFE3 Pcdhb18-201ENSMUST00000055949 5041 ntAPPRIS P1 BASIC12.54□□□□□ -0.4
Rad54bQ6PFE3 Nsf-202ENSMUST00000103075 3766 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Rad54bQ6PFE3 Nxph2-201ENSMUST00000102945 2579 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Rad54bQ6PFE3 Pla2g4f-201ENSMUST00000054651 3116 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Rad54bQ6PFE3 Bub1-201ENSMUST00000028858 3421 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Rad54bQ6PFE3 Ahi1-201ENSMUST00000105525 4851 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Rad54bQ6PFE3 Gm28578-201ENSMUST00000187727 2698 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Rad54bQ6PFE3 Atp5d-202ENSMUST00000105366 781 ntTSL 2 BASIC12.54□□□□□ -0.4
Rad54bQ6PFE3 Spsb1-202ENSMUST00000105684 1002 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Rad54bQ6PFE3 Mrps17-205ENSMUST00000119985 859 ntAPPRIS P1 TSL 2 BASIC12.54□□□□□ -0.4
Rad54bQ6PFE3 Gm15806-201ENSMUST00000120696 955 ntBASIC12.54□□□□□ -0.4
Rad54bQ6PFE3 4930579D09Rik-201ENSMUST00000132321 469 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Rad54bQ6PFE3 Gm10863-204ENSMUST00000147620 776 ntTSL 3 BASIC12.54□□□□□ -0.4
Rad54bQ6PFE3 Acat3-202ENSMUST00000160378 987 ntTSL 5 BASIC12.54□□□□□ -0.4
Rad54bQ6PFE3 Ube2i-208ENSMUST00000173084 1286 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Rad54bQ6PFE3 Gm44934-201ENSMUST00000208941 238 ntTSL 5 BASIC12.54□□□□□ -0.4
Rad54bQ6PFE3 AC155813.1-201ENSMUST00000213224 590 ntTSL 3 BASIC12.54□□□□□ -0.4
Rad54bQ6PFE3 Rps12-203ENSMUST00000218107 584 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Rad54bQ6PFE3 AC153974.2-201ENSMUST00000218577 1025 ntBASIC12.54□□□□□ -0.4
Rad54bQ6PFE3 AC022775.2-201ENSMUST00000227885 646 ntBASIC12.54□□□□□ -0.4
Rad54bQ6PFE3 Ttc4-201ENSMUST00000026480 2121 ntAPPRIS P2 TSL 1 (best) BASIC12.54□□□□□ -0.4
Rad54bQ6PFE3 U2af1l4-201ENSMUST00000043273 884 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Rad54bQ6PFE3 Zfp28-201ENSMUST00000081022 4447 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Rad54bQ6PFE3 Arid3b-209ENSMUST00000171444 4171 ntAPPRIS P2 TSL 5 BASIC12.54□□□□□ -0.4
Rad54bQ6PFE3 Stx11-201ENSMUST00000042861 4173 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Rad54bQ6PFE3 Gm45650-201ENSMUST00000211162 2169 ntTSL 5 BASIC12.54□□□□□ -0.4
Rad54bQ6PFE3 Fam83h-201ENSMUST00000060807 4502 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Rad54bQ6PFE3 Rnf152-202ENSMUST00000172299 8406 ntAPPRIS P1 TSL 2 BASIC12.54□□□□□ -0.4
Rad54bQ6PFE3 Oprd1-201ENSMUST00000056336 4021 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Rad54bQ6PFE3 Dnajb1-202ENSMUST00000212300 2854 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Rad54bQ6PFE3 Akr1b3-201ENSMUST00000102980 1387 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Rad54bQ6PFE3 Gm26735-201ENSMUST00000180992 2649 ntTSL 5 BASIC12.54□□□□□ -0.4
Rad54bQ6PFE3 Asxl1-205ENSMUST00000227428 6981 ntAPPRIS ALT2 BASIC12.54□□□□□ -0.4
Rad54bQ6PFE3 Zfp568-201ENSMUST00000074322 2016 ntAPPRIS P3 TSL 5 BASIC12.54□□□□□ -0.4
Rad54bQ6PFE3 Rps6kb1-202ENSMUST00000058286 3250 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Rad54bQ6PFE3 Oxct1-205ENSMUST00000138927 1743 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Rad54bQ6PFE3 Gm7537-201ENSMUST00000221660 1414 ntBASIC12.54□□□□□ -0.4
Rad54bQ6PFE3 Slc38a6-206ENSMUST00000140523 3032 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Rad54bQ6PFE3 Kif1a-202ENSMUST00000112958 5931 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Rad54bQ6PFE3 Rbm4b-201ENSMUST00000036744 1783 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Rad54bQ6PFE3 Prc1-211ENSMUST00000174199 2128 ntTSL 5 BASIC12.53□□□□□ -0.4
Retrieved 100 of 76,532 protein–RNA pairs in 37.6 ms