Protein–RNA interactions for Protein: Q6PE01

Snrnp40, U5 small nuclear ribonucleoprotein 40 kDa protein, mousemouse

Predictions only

Length 358 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Snrnp40Q6PE01 Ankrd61-203ENSMUST00000110718 1774 ntAPPRIS ALT2 TSL 1 (best) BASIC10.95□□□□□ -0.66
Snrnp40Q6PE01 Emb-201ENSMUST00000022242 2923 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Snrnp40Q6PE01 4930513N10Rik-204ENSMUST00000212647 3957 ntBASIC10.95□□□□□ -0.66
Snrnp40Q6PE01 Cdc42se1-201ENSMUST00000053872 2805 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Snrnp40Q6PE01 Ttc33-203ENSMUST00000118193 1671 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Snrnp40Q6PE01 Trappc2l-201ENSMUST00000015157 1659 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Snrnp40Q6PE01 Dusp19-201ENSMUST00000028384 1632 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Snrnp40Q6PE01 Agrn-201ENSMUST00000071248 4831 ntTSL 5 BASIC10.95□□□□□ -0.66
Snrnp40Q6PE01 4931414P19Rik-201ENSMUST00000022786 2670 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Snrnp40Q6PE01 Tspan32-201ENSMUST00000009396 1582 ntAPPRIS ALT2 TSL 1 (best) BASIC10.95□□□□□ -0.66
Snrnp40Q6PE01 Eef1e1-201ENSMUST00000001757 2553 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Snrnp40Q6PE01 Esrrb-202ENSMUST00000110203 2363 ntTSL 1 (best) BASIC10.95□□□□□ -0.66
Snrnp40Q6PE01 Art3-202ENSMUST00000117108 1408 ntAPPRIS ALT2 TSL 5 BASIC10.95□□□□□ -0.66
Snrnp40Q6PE01 Art3-203ENSMUST00000118106 1401 ntAPPRIS ALT2 TSL 1 (best) BASIC10.95□□□□□ -0.66
Snrnp40Q6PE01 Zfp346-201ENSMUST00000021937 3333 ntAPPRIS P2 TSL 1 (best) BASIC10.95□□□□□ -0.66
Snrnp40Q6PE01 Pmp2-201ENSMUST00000029034 1408 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Snrnp40Q6PE01 Sbk1-201ENSMUST00000056028 4109 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Snrnp40Q6PE01 Tectb-202ENSMUST00000120936 1349 ntTSL 5 BASIC10.95□□□□□ -0.66
Snrnp40Q6PE01 Rtfdc1-201ENSMUST00000029005 2173 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Snrnp40Q6PE01 Pcgf2-203ENSMUST00000103149 817 ntTSL 5 BASIC10.95□□□□□ -0.66
Snrnp40Q6PE01 Cdc42se1-204ENSMUST00000107201 907 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Snrnp40Q6PE01 Otx2-201ENSMUST00000118578 2144 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Snrnp40Q6PE01 Gm17099-201ENSMUST00000166780 412 ntTSL 3 BASIC10.95□□□□□ -0.66
Snrnp40Q6PE01 1110038B12Rik-208ENSMUST00000174714 520 ntTSL 2 BASIC10.95□□□□□ -0.66
Snrnp40Q6PE01 Rpl41-203ENSMUST00000176683 437 ntAPPRIS P2 TSL 2 BASIC10.95□□□□□ -0.66
Snrnp40Q6PE01 Gm8100-201ENSMUST00000182906 988 ntBASIC10.95□□□□□ -0.66
Snrnp40Q6PE01 Fgf5-202ENSMUST00000200059 600 ntTSL 1 (best) BASIC10.95□□□□□ -0.66
Snrnp40Q6PE01 Mir7686-201ENSMUST00000200604 57 ntBASIC10.95□□□□□ -0.66
Snrnp40Q6PE01 C530044C16Rik-202ENSMUST00000205217 1239 ntTSL 1 (best) BASIC10.95□□□□□ -0.66
Snrnp40Q6PE01 Gm45398-201ENSMUST00000210561 165 ntBASIC10.95□□□□□ -0.66
Snrnp40Q6PE01 Gm45799-208ENSMUST00000211054 490 ntAPPRIS P2 TSL 3 BASIC10.95□□□□□ -0.66
Snrnp40Q6PE01 Cbx3-ps8-201ENSMUST00000214564 548 ntBASIC10.95□□□□□ -0.66
Snrnp40Q6PE01 Olfr1347-205ENSMUST00000220413 964 ntBASIC10.95□□□□□ -0.66
Snrnp40Q6PE01 Olfr1347-201ENSMUST00000036357 964 ntAPPRIS P1 BASIC10.95□□□□□ -0.66
Snrnp40Q6PE01 U2af1l4-201ENSMUST00000043273 884 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Snrnp40Q6PE01 Gm17080-201ENSMUST00000087588 811 ntTSL 5 BASIC10.95□□□□□ -0.66
Snrnp40Q6PE01 Arid3a-201ENSMUST00000019708 5361 ntAPPRIS P3 TSL 1 (best) BASIC10.95□□□□□ -0.66
Snrnp40Q6PE01 Ahcyl2-205ENSMUST00000125911 2039 ntTSL 5 BASIC10.95□□□□□ -0.66
Snrnp40Q6PE01 Nrf1-211ENSMUST00000115212 3584 ntTSL 1 (best) BASIC10.95□□□□□ -0.66
Snrnp40Q6PE01 Cd33-201ENSMUST00000004728 1962 ntAPPRIS ALT2 TSL 1 (best) BASIC10.95□□□□□ -0.66
Snrnp40Q6PE01 Nrxn1-202ENSMUST00000072671 8118 ntTSL 5 BASIC10.95□□□□□ -0.66
Snrnp40Q6PE01 Hnrnpm-202ENSMUST00000114385 2550 ntTSL 2 BASIC10.95□□□□□ -0.66
Snrnp40Q6PE01 Egr3-204ENSMUST00000225200 3940 ntAPPRIS P2 BASIC10.95□□□□□ -0.66
Snrnp40Q6PE01 4930488B22Rik-201ENSMUST00000172500 1722 ntTSL 1 (best) BASIC10.95□□□□□ -0.66
Snrnp40Q6PE01 Gm20605-201ENSMUST00000177545 4464 ntAPPRIS P1 TSL 2 BASIC10.95□□□□□ -0.66
Snrnp40Q6PE01 Shank2-203ENSMUST00000105902 8988 ntAPPRIS P1 TSL 5 BASIC10.95□□□□□ -0.66
Snrnp40Q6PE01 Actr8-204ENSMUST00000224797 2328 ntAPPRIS P1 BASIC10.95□□□□□ -0.66
Snrnp40Q6PE01 Ncor2-205ENSMUST00000111398 8808 ntAPPRIS ALT2 TSL 5 BASIC10.95□□□□□ -0.66
Snrnp40Q6PE01 Hdac5-203ENSMUST00000107151 4852 ntTSL 5 BASIC10.95□□□□□ -0.66
Snrnp40Q6PE01 Smarcb1-202ENSMUST00000121304 1622 ntAPPRIS ALT1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Snrnp40Q6PE01 4731419I09Rik-201ENSMUST00000180791 2820 ntTSL 2 BASIC10.94□□□□□ -0.66
Snrnp40Q6PE01 Qsox1-202ENSMUST00000111764 2722 ntAPPRIS ALT2 TSL 1 (best) BASIC10.94□□□□□ -0.66
Snrnp40Q6PE01 C530008M17Rik-204ENSMUST00000121160 6921 ntAPPRIS ALT2 TSL 5 BASIC10.94□□□□□ -0.66
Snrnp40Q6PE01 Znrf1-203ENSMUST00000168428 4451 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Snrnp40Q6PE01 Grb2-203ENSMUST00000106497 2683 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Snrnp40Q6PE01 Taf6-203ENSMUST00000110937 2093 ntTSL 5 BASIC10.94□□□□□ -0.66
Snrnp40Q6PE01 Ccdc27-201ENSMUST00000047207 2089 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Snrnp40Q6PE01 Gm36855-203ENSMUST00000216660 1406 ntTSL 5 BASIC10.94□□□□□ -0.66
Snrnp40Q6PE01 Retreg1-206ENSMUST00000228306 1430 ntBASIC10.94□□□□□ -0.66
Snrnp40Q6PE01 Bcl11a-202ENSMUST00000109514 5989 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Snrnp40Q6PE01 2810402E24Rik-201ENSMUST00000190699 3040 ntBASIC10.94□□□□□ -0.66
Snrnp40Q6PE01 Spg7-202ENSMUST00000125975 2408 ntAPPRIS ALT2 TSL 5 BASIC10.94□□□□□ -0.66
Snrnp40Q6PE01 Eif5b-201ENSMUST00000027252 7797 ntAPPRIS P1 TSL 2 BASIC10.94□□□□□ -0.66
Snrnp40Q6PE01 Mzf1-204ENSMUST00000182490 2872 ntAPPRIS ALT2 TSL 1 (best) BASIC10.94□□□□□ -0.66
Snrnp40Q6PE01 Gm43721-201ENSMUST00000199677 2313 ntBASIC10.94□□□□□ -0.66
Snrnp40Q6PE01 Cela3b-201ENSMUST00000102522 926 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Snrnp40Q6PE01 Ifna15-201ENSMUST00000102809 573 ntAPPRIS P1 BASIC10.94□□□□□ -0.66
Snrnp40Q6PE01 Gm24231-201ENSMUST00000104315 133 ntBASIC10.94□□□□□ -0.66
Snrnp40Q6PE01 Timm10b-204ENSMUST00000106784 494 ntTSL 3 BASIC10.94□□□□□ -0.66
Snrnp40Q6PE01 Ccl1-202ENSMUST00000108189 514 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Snrnp40Q6PE01 Rab15-202ENSMUST00000118604 778 ntTSL 3 BASIC10.94□□□□□ -0.66
Snrnp40Q6PE01 Gm5638-201ENSMUST00000118618 1258 ntBASIC10.94□□□□□ -0.66
Snrnp40Q6PE01 Gm15573-201ENSMUST00000119487 540 ntBASIC10.94□□□□□ -0.66
Snrnp40Q6PE01 Gm16195-201ENSMUST00000130607 442 ntTSL 2 BASIC10.94□□□□□ -0.66
Snrnp40Q6PE01 Immp2l-202ENSMUST00000132121 1147 ntAPPRIS P1 TSL 5 BASIC10.94□□□□□ -0.66
Snrnp40Q6PE01 4930538E20Rik-202ENSMUST00000146717 497 ntTSL 1 (best) BASIC10.94□□□□□ -0.66
Snrnp40Q6PE01 Gm16251-201ENSMUST00000162649 338 ntTSL 3 BASIC10.94□□□□□ -0.66
Snrnp40Q6PE01 Gm17135-201ENSMUST00000167009 564 ntTSL 3 BASIC10.94□□□□□ -0.66
Snrnp40Q6PE01 Pcgf1-207ENSMUST00000177177 854 ntTSL 1 (best) BASIC10.94□□□□□ -0.66
Snrnp40Q6PE01 Insig2-214ENSMUST00000186915 674 ntTSL 3 BASIC10.94□□□□□ -0.66
Snrnp40Q6PE01 Rpl36-ps9-201ENSMUST00000196458 277 ntBASIC10.94□□□□□ -0.66
Snrnp40Q6PE01 Gng8-204ENSMUST00000205716 432 ntAPPRIS P1 TSL 3 BASIC10.94□□□□□ -0.66
Snrnp40Q6PE01 Ccl1-201ENSMUST00000021043 611 ntTSL 1 (best) BASIC10.94□□□□□ -0.66
Snrnp40Q6PE01 Gm4797-201ENSMUST00000219075 1283 ntBASIC10.94□□□□□ -0.66
Snrnp40Q6PE01 Gm18974-201ENSMUST00000221478 1031 ntBASIC10.94□□□□□ -0.66
Snrnp40Q6PE01 CT025551.1-201ENSMUST00000223996 692 ntBASIC10.94□□□□□ -0.66
Snrnp40Q6PE01 Foxred2-202ENSMUST00000117725 4347 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Snrnp40Q6PE01 Hmg20a-204ENSMUST00000214869 1782 ntTSL 1 (best) BASIC10.94□□□□□ -0.66
Snrnp40Q6PE01 Srrm1-203ENSMUST00000105861 3797 ntAPPRIS ALT2 TSL 5 BASIC10.94□□□□□ -0.66
Snrnp40Q6PE01 Oxct1-205ENSMUST00000138927 1743 ntTSL 1 (best) BASIC10.94□□□□□ -0.66
Snrnp40Q6PE01 Ints3-202ENSMUST00000071488 4038 ntAPPRIS P2 TSL 1 (best) BASIC10.94□□□□□ -0.66
Snrnp40Q6PE01 Ltbp2-203ENSMUST00000163189 6470 ntAPPRIS ALT2 TSL 1 (best) BASIC10.94□□□□□ -0.66
Snrnp40Q6PE01 Igsf9b-202ENSMUST00000133213 4239 ntAPPRIS P2 TSL 5 BASIC10.94□□□□□ -0.66
Snrnp40Q6PE01 Il11ra1-203ENSMUST00000108041 1953 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Snrnp40Q6PE01 Heatr3-201ENSMUST00000034079 3251 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Snrnp40Q6PE01 Wwox-202ENSMUST00000109107 2383 ntTSL 1 (best) BASIC10.94□□□□□ -0.66
Snrnp40Q6PE01 Cpt2-201ENSMUST00000030345 2372 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Snrnp40Q6PE01 Rpsa-201ENSMUST00000035105 1938 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Snrnp40Q6PE01 Snrpn-201ENSMUST00000059305 1932 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Snrnp40Q6PE01 Ntn4-201ENSMUST00000020204 3646 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Retrieved 100 of 76,532 protein–RNA pairs in 61 ms