Protein–RNA interactions for Protein: Q62205

Scn9a, Sodium channel protein type 9 subunit alpha, mousemouse

Predictions only

Length 1,984 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scn9aQ62205 Gm13022-201ENSMUST00000121181 285 ntBASIC14.39□□□□□ -0.11
Scn9aQ62205 Rps19-ps9-201ENSMUST00000161787 414 ntBASIC14.39□□□□□ -0.11
Scn9aQ62205 Gm29418-201ENSMUST00000186162 647 ntTSL 5 BASIC14.39□□□□□ -0.11
Scn9aQ62205 Gm43610-201ENSMUST00000199117 365 ntBASIC14.39□□□□□ -0.11
Scn9aQ62205 Gm44759-201ENSMUST00000206057 430 ntTSL 3 BASIC14.39□□□□□ -0.11
Scn9aQ62205 AC112945.1-201ENSMUST00000226413 514 ntBASIC14.39□□□□□ -0.11
Scn9aQ62205 Dnmt3b-201ENSMUST00000056495 4318 ntAPPRIS ALT2 TSL 5 BASIC14.39□□□□□ -0.11
Scn9aQ62205 Rab9b-201ENSMUST00000058814 3980 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Scn9aQ62205 Gm14123-201ENSMUST00000156345 2658 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Scn9aQ62205 Thumpd1-201ENSMUST00000033236 2689 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Scn9aQ62205 Rabep1-201ENSMUST00000076270 5408 ntAPPRIS P2 TSL 1 (best) BASIC14.39□□□□□ -0.11
Scn9aQ62205 Wscd2-201ENSMUST00000094452 4302 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Scn9aQ62205 Arl14ep-201ENSMUST00000028536 3337 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Scn9aQ62205 Nxf2-202ENSMUST00000113187 2316 ntAPPRIS ALT2 TSL 1 (best) BASIC14.39□□□□□ -0.11
Scn9aQ62205 Tctn2-207ENSMUST00000185820 2733 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Scn9aQ62205 Cacna1b-201ENSMUST00000041342 6984 ntAPPRIS ALT2 TSL 1 (best) BASIC14.39□□□□□ -0.11
Scn9aQ62205 Fam126a-201ENSMUST00000030849 5659 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Scn9aQ62205 Ednrb-203ENSMUST00000227824 2669 ntAPPRIS P1 BASIC14.39□□□□□ -0.11
Scn9aQ62205 Sgpl1-202ENSMUST00000122259 4102 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Scn9aQ62205 Hspa14-201ENSMUST00000027961 1795 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Scn9aQ62205 Gm37691-201ENSMUST00000192147 2573 ntBASIC14.38□□□□□ -0.11
Scn9aQ62205 Cdk11b-201ENSMUST00000067081 2595 ntAPPRIS P3 TSL 1 (best) BASIC14.38□□□□□ -0.11
Scn9aQ62205 Klc2-202ENSMUST00000113727 2874 ntTSL 5 BASIC14.38□□□□□ -0.11
Scn9aQ62205 Rbbp5-207ENSMUST00000190997 2856 ntAPPRIS P2 TSL 1 (best) BASIC14.38□□□□□ -0.11
Scn9aQ62205 Hcrtr1-204ENSMUST00000164887 1251 ntAPPRIS P1 TSL 5 BASIC14.38□□□□□ -0.11
Scn9aQ62205 Gm15469-201ENSMUST00000201750 961 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Scn9aQ62205 AC168279.1-201ENSMUST00000214611 382 ntBASIC14.38□□□□□ -0.11
Scn9aQ62205 Olfr1047-201ENSMUST00000099901 960 ntAPPRIS P1 BASIC14.38□□□□□ -0.11
Scn9aQ62205 Lyplal1-201ENSMUST00000045388 1578 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Scn9aQ62205 Gm2420-201ENSMUST00000119864 2149 ntBASIC14.38□□□□□ -0.11
Scn9aQ62205 Shroom3-201ENSMUST00000113051 6435 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Scn9aQ62205 Wdr47-201ENSMUST00000051145 4222 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Scn9aQ62205 Sema3b-205ENSMUST00000102532 3191 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Scn9aQ62205 Hpse2-201ENSMUST00000099428 1779 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Scn9aQ62205 Hvcn1-201ENSMUST00000072602 2790 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Scn9aQ62205 Duoxa1-202ENSMUST00000110537 1506 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Scn9aQ62205 Kcnn1-201ENSMUST00000110078 4047 ntAPPRIS P2 TSL 1 (best) BASIC14.38□□□□□ -0.11
Scn9aQ62205 Stk33-202ENSMUST00000106745 2410 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Scn9aQ62205 Gsdma-201ENSMUST00000017348 2726 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Scn9aQ62205 Gpsm2-201ENSMUST00000029482 3498 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Scn9aQ62205 Enpp7-202ENSMUST00000106273 1408 ntAPPRIS ALT2 TSL 5 BASIC14.38□□□□□ -0.11
Scn9aQ62205 Smim11-202ENSMUST00000118064 782 ntAPPRIS P1 TSL 2 BASIC14.38□□□□□ -0.11
Scn9aQ62205 Mfsd11-212ENSMUST00000153084 1194 ntTSL 5 BASIC14.38□□□□□ -0.11
Scn9aQ62205 BC016548-202ENSMUST00000153797 805 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Scn9aQ62205 Rfx7-202ENSMUST00000163401 7880 ntAPPRIS P1 TSL 2 BASIC14.38□□□□□ -0.11
Scn9aQ62205 Iqcf3-202ENSMUST00000186668 633 ntAPPRIS ALT2 TSL 5 BASIC14.38□□□□□ -0.11
Scn9aQ62205 Gm44882-201ENSMUST00000205702 802 ntBASIC14.38□□□□□ -0.11
Scn9aQ62205 Pgpep1l-202ENSMUST00000207874 677 ntAPPRIS P1 TSL 5 BASIC14.38□□□□□ -0.11
Scn9aQ62205 Gm35625-201ENSMUST00000210416 316 ntTSL 3 BASIC14.38□□□□□ -0.11
Scn9aQ62205 Stt3a-209ENSMUST00000217599 285 ntTSL 5 BASIC14.38□□□□□ -0.11
Scn9aQ62205 Gm32635-201ENSMUST00000221493 1162 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Scn9aQ62205 Mcee-201ENSMUST00000037205 828 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Scn9aQ62205 Taar9-201ENSMUST00000041180 1047 ntAPPRIS P1 BASIC14.38□□□□□ -0.11
Scn9aQ62205 BC030499-201ENSMUST00000046361 959 ntAPPRIS P1 TSL 5 BASIC14.38□□□□□ -0.11
Scn9aQ62205 Sgsm2-202ENSMUST00000081799 4873 ntAPPRIS ALT2 TSL 5 BASIC14.38□□□□□ -0.11
Scn9aQ62205 Lgals1-201ENSMUST00000089377 800 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Scn9aQ62205 Foxp1-205ENSMUST00000113324 2121 ntTSL 5 BASIC14.37□□□□□ -0.11
Scn9aQ62205 Foxp1-207ENSMUST00000113328 2121 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Scn9aQ62205 Foxp1-228ENSMUST00000177307 2121 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Scn9aQ62205 Dlst-201ENSMUST00000053811 2764 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Scn9aQ62205 Parp3-203ENSMUST00000123555 2495 ntAPPRIS P3 TSL 1 (best) BASIC14.37□□□□□ -0.11
Scn9aQ62205 BC003331-205ENSMUST00000111913 3273 ntAPPRIS P3 TSL 5 BASIC14.37□□□□□ -0.11
Scn9aQ62205 Bean1-206ENSMUST00000213077 1373 ntAPPRIS ALT2 TSL 3 BASIC14.37□□□□□ -0.11
Scn9aQ62205 Spata21-201ENSMUST00000051907 2526 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Scn9aQ62205 Setdb2-201ENSMUST00000095775 3034 ntAPPRIS ALT2 TSL 5 BASIC14.37□□□□□ -0.11
Scn9aQ62205 Ptbp2-201ENSMUST00000029780 3364 ntAPPRIS P3 TSL 1 (best) BASIC14.37□□□□□ -0.11
Scn9aQ62205 Snap23-202ENSMUST00000110711 2723 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Scn9aQ62205 Pex2-206ENSMUST00000195855 1587 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Scn9aQ62205 2610301B20Rik-202ENSMUST00000101504 2053 ntAPPRIS ALT2 TSL 5 BASIC14.37□□□□□ -0.11
Scn9aQ62205 Rnf183-203ENSMUST00000107455 1432 ntAPPRIS P1 TSL 3 BASIC14.37□□□□□ -0.11
Scn9aQ62205 Tub-201ENSMUST00000033341 5997 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Scn9aQ62205 Foxo1-201ENSMUST00000053764 8665 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Scn9aQ62205 Rpl19-ps1-201ENSMUST00000121059 591 ntBASIC14.37□□□□□ -0.11
Scn9aQ62205 Gm16081-201ENSMUST00000155992 684 ntTSL 3 BASIC14.37□□□□□ -0.11
Scn9aQ62205 Gm44867-201ENSMUST00000205675 530 ntTSL 3 BASIC14.37□□□□□ -0.11
Scn9aQ62205 Gm18204-201ENSMUST00000209835 793 ntBASIC14.37□□□□□ -0.11
Scn9aQ62205 Il1rn-204ENSMUST00000114487 2474 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Scn9aQ62205 Irf9-205ENSMUST00000138037 2343 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
Scn9aQ62205 A430034D21Rik-201ENSMUST00000194339 1802 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Scn9aQ62205 Rnf133-202ENSMUST00000115354 1333 ntAPPRIS P1 BASIC14.37□□□□□ -0.11
Scn9aQ62205 Tubb4a-201ENSMUST00000071135 2228 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Scn9aQ62205 Gm28323-201ENSMUST00000186817 2499 ntBASIC14.37□□□□□ -0.11
Scn9aQ62205 M6pr-202ENSMUST00000112610 2539 ntAPPRIS P1 TSL 5 BASIC14.37□□□□□ -0.11
Scn9aQ62205 Ank-201ENSMUST00000022875 3498 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Scn9aQ62205 Col16a1-201ENSMUST00000044565 5206 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Scn9aQ62205 Bcl6-201ENSMUST00000023151 3525 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Scn9aQ62205 Ccdc163-202ENSMUST00000106462 1112 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
Scn9aQ62205 Uqcc1-202ENSMUST00000109631 1091 ntAPPRIS ALT2 TSL 5 BASIC14.36□□□□□ -0.11
Scn9aQ62205 Gm15036-201ENSMUST00000118880 400 ntBASIC14.36□□□□□ -0.11
Scn9aQ62205 Fxyd4-203ENSMUST00000203082 815 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Scn9aQ62205 Gm35713-201ENSMUST00000210516 199 ntBASIC14.36□□□□□ -0.11
Scn9aQ62205 Sprr2a2-202ENSMUST00000090871 722 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Scn9aQ62205 Gm10775-201ENSMUST00000099425 1203 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Scn9aQ62205 Adcyap1r1-204ENSMUST00000165857 1491 ntAPPRIS ALT2 TSL 5 BASIC14.36□□□□□ -0.11
Scn9aQ62205 Snhg18-201ENSMUST00000181536 1486 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Scn9aQ62205 Zfp628-201ENSMUST00000116354 3523 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Scn9aQ62205 Dgkg-201ENSMUST00000023578 2725 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
Scn9aQ62205 Txlng-203ENSMUST00000112315 2525 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Scn9aQ62205 N4bp2l1-201ENSMUST00000016279 1905 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Scn9aQ62205 Psmd12-202ENSMUST00000106750 1311 ntTSL 5 BASIC14.36□□□□□ -0.11
Retrieved 100 of 76,532 protein–RNA pairs in 117.6 ms