Protein–RNA interactions for Protein: Q3UPR0

Shisa3, Protein shisa-3 homolog, mousemouse

Predictions only

Length 238 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Shisa3Q3UPR0 CT030657.3-201ENSMUST00000222707 1200 ntBASIC10.82□□□□□ -0.68
Shisa3Q3UPR0 Rps15-201ENSMUST00000062674 572 ntTSL 1 (best) BASIC10.82□□□□□ -0.68
Shisa3Q3UPR0 Rpl13a-ps1-201ENSMUST00000071866 612 ntAPPRIS P1 BASIC10.82□□□□□ -0.68
Shisa3Q3UPR0 Ndufa3-201ENSMUST00000076657 515 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Shisa3Q3UPR0 Vmn1r217-201ENSMUST00000091721 897 ntAPPRIS P1 BASIC10.82□□□□□ -0.68
Shisa3Q3UPR0 Gm8206-201ENSMUST00000164139 1956 ntTSL 5 BASIC10.82□□□□□ -0.68
Shisa3Q3UPR0 Gusb-201ENSMUST00000026613 2687 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Shisa3Q3UPR0 Esrp1-201ENSMUST00000043781 3743 ntTSL 5 BASIC10.82□□□□□ -0.68
Shisa3Q3UPR0 Acly-203ENSMUST00000107389 4426 ntAPPRIS ALT1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Shisa3Q3UPR0 Tbc1d14-205ENSMUST00000136189 4436 ntTSL 1 (best) BASIC10.82□□□□□ -0.68
Shisa3Q3UPR0 4933417C20Rik-201ENSMUST00000193962 1874 ntBASIC10.82□□□□□ -0.68
Shisa3Q3UPR0 Setd1b-206ENSMUST00000174836 7515 ntAPPRIS ALT2 TSL 5 BASIC10.82□□□□□ -0.68
Shisa3Q3UPR0 Trim2-203ENSMUST00000107691 7428 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Shisa3Q3UPR0 Plxnb2-202ENSMUST00000109331 6377 ntAPPRIS P1 TSL 5 BASIC10.82□□□□□ -0.68
Shisa3Q3UPR0 Pla2g5-201ENSMUST00000030524 2131 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Shisa3Q3UPR0 Gm45338-207ENSMUST00000211499 1405 ntTSL 5 BASIC10.82□□□□□ -0.68
Shisa3Q3UPR0 Dusp6-204ENSMUST00000220291 2359 ntTSL 5 BASIC10.82□□□□□ -0.68
Shisa3Q3UPR0 Gm43666-201ENSMUST00000197116 2989 ntTSL 1 (best) BASIC10.82□□□□□ -0.68
Shisa3Q3UPR0 Gm10851-201ENSMUST00000192087 1685 ntTSL 1 (best) BASIC10.82□□□□□ -0.68
Shisa3Q3UPR0 Sdf4-201ENSMUST00000050078 5177 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Shisa3Q3UPR0 Tmem56-204ENSMUST00000135818 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC10.82□□□□□ -0.68
Shisa3Q3UPR0 Adcyap1r1-208ENSMUST00000172084 1344 ntAPPRIS ALT2 TSL 5 BASIC10.82□□□□□ -0.68
Shisa3Q3UPR0 Gm39204-201ENSMUST00000210045 1307 ntTSL 5 BASIC10.82□□□□□ -0.68
Shisa3Q3UPR0 Epha5-202ENSMUST00000113398 4830 ntTSL 5 BASIC10.82□□□□□ -0.68
Shisa3Q3UPR0 Vldlr-207ENSMUST00000167487 7971 ntAPPRIS P3 TSL 1 (best) BASIC10.82□□□□□ -0.68
Shisa3Q3UPR0 Ncor2-205ENSMUST00000111398 8808 ntAPPRIS ALT2 TSL 5 BASIC10.82□□□□□ -0.68
Shisa3Q3UPR0 Pars2-202ENSMUST00000106781 3046 ntAPPRIS ALT2 TSL 1 (best) BASIC10.82□□□□□ -0.68
Shisa3Q3UPR0 Runx3-201ENSMUST00000056977 3884 ntAPPRIS P2 TSL 1 (best) BASIC10.82□□□□□ -0.68
Shisa3Q3UPR0 Dab2ip-209ENSMUST00000135741 4128 ntAPPRIS ALT2 TSL 1 (best) BASIC10.82□□□□□ -0.68
Shisa3Q3UPR0 Lmo7-201ENSMUST00000100337 6092 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Shisa3Q3UPR0 B930036N10Rik-202ENSMUST00000181170 3544 ntBASIC10.81□□□□□ -0.68
Shisa3Q3UPR0 Dnajc13-201ENSMUST00000035170 8012 ntAPPRIS P1 TSL 5 BASIC10.81□□□□□ -0.68
Shisa3Q3UPR0 Pde9a-201ENSMUST00000047168 2065 ntAPPRIS P2 TSL 1 (best) BASIC10.81□□□□□ -0.68
Shisa3Q3UPR0 Dlgap1-210ENSMUST00000146730 3936 ntTSL 1 (best) BASIC10.81□□□□□ -0.68
Shisa3Q3UPR0 Tacc2-201ENSMUST00000033141 3940 ntAPPRIS ALT2 TSL 5 BASIC10.81□□□□□ -0.68
Shisa3Q3UPR0 Grm7-202ENSMUST00000172951 4197 ntAPPRIS P3 TSL 1 (best) BASIC10.81□□□□□ -0.68
Shisa3Q3UPR0 Kcnh6-202ENSMUST00000106903 2816 ntTSL 5 BASIC10.81□□□□□ -0.68
Shisa3Q3UPR0 Serpina1f-202ENSMUST00000117053 2830 ntTSL 1 (best) BASIC10.81□□□□□ -0.68
Shisa3Q3UPR0 Haus8-202ENSMUST00000110071 1452 ntAPPRIS P3 TSL 1 (best) BASIC10.81□□□□□ -0.68
Shisa3Q3UPR0 Sall4-201ENSMUST00000029061 5073 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Shisa3Q3UPR0 Gm29609-201ENSMUST00000101411 3223 ntAPPRIS P1 TSL 2 BASIC10.81□□□□□ -0.68
Shisa3Q3UPR0 Myh3-203ENSMUST00000165221 5994 ntAPPRIS P1 TSL 5 BASIC10.81□□□□□ -0.68
Shisa3Q3UPR0 Arfgap1-204ENSMUST00000108861 1885 ntAPPRIS ALT2 TSL 1 (best) BASIC10.81□□□□□ -0.68
Shisa3Q3UPR0 Smim1-208ENSMUST00000143047 3373 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Shisa3Q3UPR0 Ttc4-201ENSMUST00000026480 2121 ntAPPRIS P2 TSL 1 (best) BASIC10.81□□□□□ -0.68
Shisa3Q3UPR0 Kifc2-201ENSMUST00000004294 3143 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Shisa3Q3UPR0 Pag1-204ENSMUST00000161949 8256 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Shisa3Q3UPR0 Eef2k-203ENSMUST00000106488 2537 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Shisa3Q3UPR0 Immt-203ENSMUST00000114151 2518 ntAPPRIS ALT2 TSL 1 (best) BASIC10.81□□□□□ -0.68
Shisa3Q3UPR0 Nfasc-207ENSMUST00000187861 4927 ntTSL 5 BASIC10.81□□□□□ -0.68
Shisa3Q3UPR0 Ttc25-201ENSMUST00000006976 2673 ntAPPRIS ALT2 TSL 1 (best) BASIC10.81□□□□□ -0.68
Shisa3Q3UPR0 Mir692-1-201ENSMUST00000102263 109 ntBASIC10.81□□□□□ -0.68
Shisa3Q3UPR0 Fgf18-202ENSMUST00000109363 991 ntTSL 3 BASIC10.81□□□□□ -0.68
Shisa3Q3UPR0 Kctd17-202ENSMUST00000159771 986 ntAPPRIS ALT2 TSL 2 BASIC10.81□□□□□ -0.68
Shisa3Q3UPR0 Gm26894-201ENSMUST00000180828 1134 ntTSL 1 (best) BASIC10.81□□□□□ -0.68
Shisa3Q3UPR0 Gm9061-201ENSMUST00000182707 1006 ntBASIC10.81□□□□□ -0.68
Shisa3Q3UPR0 Gm2495-201ENSMUST00000191160 466 ntBASIC10.81□□□□□ -0.68
Shisa3Q3UPR0 Gm42599-201ENSMUST00000201308 469 ntBASIC10.81□□□□□ -0.68
Shisa3Q3UPR0 6430710M23Rik-201ENSMUST00000210843 1191 ntBASIC10.81□□□□□ -0.68
Shisa3Q3UPR0 Gm6983-201ENSMUST00000214912 628 ntBASIC10.81□□□□□ -0.68
Shisa3Q3UPR0 Txn1-201ENSMUST00000030051 1051 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Shisa3Q3UPR0 Stard8-201ENSMUST00000036606 4963 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Shisa3Q3UPR0 3830432H09Rik-202ENSMUST00000188909 2414 ntTSL 1 (best) BASIC10.81□□□□□ -0.68
Shisa3Q3UPR0 Insrr-201ENSMUST00000029711 5102 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Shisa3Q3UPR0 Epb41-203ENSMUST00000084253 5141 ntAPPRIS ALT2 TSL 1 (best) BASIC10.81□□□□□ -0.68
Shisa3Q3UPR0 Usp3-211ENSMUST00000174387 1901 ntTSL 5 BASIC10.81□□□□□ -0.68
Shisa3Q3UPR0 Etl4-201ENSMUST00000045555 5931 ntAPPRIS ALT2 TSL 1 (best) BASIC10.81□□□□□ -0.68
Shisa3Q3UPR0 Prickle1-202ENSMUST00000109255 4144 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Shisa3Q3UPR0 Entpd8-203ENSMUST00000114380 2301 ntAPPRIS P2 TSL 1 (best) BASIC10.81□□□□□ -0.68
Shisa3Q3UPR0 Crkl-201ENSMUST00000006293 3863 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Shisa3Q3UPR0 Ly6e-210ENSMUST00000188866 2068 ntAPPRIS P1 TSL 3 BASIC10.81□□□□□ -0.68
Shisa3Q3UPR0 Stra6-202ENSMUST00000085677 2725 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Shisa3Q3UPR0 Prkar1a-201ENSMUST00000049527 3359 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Shisa3Q3UPR0 Ppp1r16b-201ENSMUST00000045503 6408 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Shisa3Q3UPR0 Txndc5-204ENSMUST00000162075 2619 ntTSL 1 (best) BASIC10.81□□□□□ -0.68
Shisa3Q3UPR0 Celrr-202ENSMUST00000181433 1561 ntTSL 1 (best) BASIC10.81□□□□□ -0.68
Shisa3Q3UPR0 Nr2c2-201ENSMUST00000113460 7647 ntAPPRIS P3 TSL 1 (best) BASIC10.81□□□□□ -0.68
Shisa3Q3UPR0 Osgin1-201ENSMUST00000098365 1959 ntTSL 1 (best) BASIC10.81□□□□□ -0.68
Shisa3Q3UPR0 Rad54l-202ENSMUST00000102705 2780 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Shisa3Q3UPR0 Ablim1-202ENSMUST00000099294 6232 ntAPPRIS ALT2 TSL 5 BASIC10.81□□□□□ -0.68
Shisa3Q3UPR0 Spag8-202ENSMUST00000107870 1342 ntAPPRIS P3 TSL 1 (best) BASIC10.81□□□□□ -0.68
Shisa3Q3UPR0 Epb41-208ENSMUST00000105981 5303 ntAPPRIS P3 TSL 5 BASIC10.81□□□□□ -0.68
Shisa3Q3UPR0 Msi2-203ENSMUST00000107909 6436 ntAPPRIS ALT2 TSL 1 (best) BASIC10.81□□□□□ -0.68
Shisa3Q3UPR0 Ccdc85a-204ENSMUST00000109502 5220 ntTSL 1 (best) BASIC10.81□□□□□ -0.68
Shisa3Q3UPR0 Pdss2-202ENSMUST00000159139 1467 ntTSL 1 (best) BASIC10.81□□□□□ -0.68
Shisa3Q3UPR0 Rbms2-201ENSMUST00000092033 1481 ntAPPRIS P4 TSL 1 (best) BASIC10.81□□□□□ -0.68
Shisa3Q3UPR0 Stat5a-203ENSMUST00000107357 3605 ntTSL 1 (best) BASIC10.81□□□□□ -0.68
Shisa3Q3UPR0 Asap3-201ENSMUST00000047526 4225 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Shisa3Q3UPR0 Aamp-202ENSMUST00000178235 1756 ntAPPRIS ALT1 TSL 5 BASIC10.8□□□□□ -0.68
Shisa3Q3UPR0 Ippk-201ENSMUST00000021817 2856 ntTSL 1 (best) BASIC10.8□□□□□ -0.68
Shisa3Q3UPR0 Rgs6-204ENSMUST00000185674 1362 ntTSL 5 BASIC10.8□□□□□ -0.68
Shisa3Q3UPR0 Gm18630-201ENSMUST00000222109 1397 ntBASIC10.8□□□□□ -0.68
Shisa3Q3UPR0 Wipf3-201ENSMUST00000126637 4414 ntAPPRIS ALT2 TSL 5 BASIC10.8□□□□□ -0.68
Shisa3Q3UPR0 Gfra1-203ENSMUST00000129100 4415 ntTSL 1 (best) BASIC10.8□□□□□ -0.68
Shisa3Q3UPR0 Wdr45-203ENSMUST00000115688 1510 ntTSL 1 (best) BASIC10.8□□□□□ -0.68
Shisa3Q3UPR0 Slc6a13-201ENSMUST00000064580 2234 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Shisa3Q3UPR0 Hdac5-204ENSMUST00000107152 3788 ntAPPRIS P3 TSL 1 (best) BASIC10.8□□□□□ -0.68
Shisa3Q3UPR0 Mmgt2-203ENSMUST00000129162 1828 ntAPPRIS P1 TSL 5 BASIC10.8□□□□□ -0.68
Shisa3Q3UPR0 Alg13-202ENSMUST00000070801 1802 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Shisa3Q3UPR0 Lgr5-206ENSMUST00000172806 2652 ntTSL 5 BASIC10.8□□□□□ -0.68
Retrieved 100 of 76,532 protein–RNA pairs in 47.7 ms