Protein–RNA interactions for Protein: Q3TJD7

Pdlim7, PDZ and LIM domain protein 7, mousemouse

Predictions only

Length 457 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pdlim7Q3TJD7 Trpm4-201ENSMUST00000042194 4234 ntAPPRIS P2 TSL 1 (best) BASIC13.93□□□□□ -0.18
Pdlim7Q3TJD7 Yes1-201ENSMUST00000072311 4586 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Pdlim7Q3TJD7 Itgav-202ENSMUST00000111740 6788 ntAPPRIS ALT2 TSL 5 BASIC13.93□□□□□ -0.18
Pdlim7Q3TJD7 4933406P04Rik-201ENSMUST00000092680 1789 ntBASIC13.93□□□□□ -0.18
Pdlim7Q3TJD7 Zfp64-203ENSMUST00000109162 2848 ntAPPRIS P1 TSL 2 BASIC13.93□□□□□ -0.18
Pdlim7Q3TJD7 Tspan11-201ENSMUST00000032501 5188 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Pdlim7Q3TJD7 Pcnx3-201ENSMUST00000068169 5276 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
Pdlim7Q3TJD7 Btaf1-201ENSMUST00000099494 7204 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Pdlim7Q3TJD7 Chrnd-202ENSMUST00000186373 2949 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
Pdlim7Q3TJD7 Nup98-201ENSMUST00000070165 4052 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
Pdlim7Q3TJD7 4933439K11Rik-203ENSMUST00000169111 1869 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
Pdlim7Q3TJD7 Rgs20-202ENSMUST00000118000 2125 ntAPPRIS ALT2 TSL 5 BASIC13.93□□□□□ -0.18
Pdlim7Q3TJD7 Wiz-201ENSMUST00000064694 2871 ntAPPRIS P4 TSL 1 (best) BASIC13.93□□□□□ -0.18
Pdlim7Q3TJD7 Nmral1-203ENSMUST00000115851 1306 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
Pdlim7Q3TJD7 Fam110a-203ENSMUST00000109864 1591 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Pdlim7Q3TJD7 Sec14l5-201ENSMUST00000165810 2337 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Pdlim7Q3TJD7 Neurl3-201ENSMUST00000056946 2598 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Pdlim7Q3TJD7 Zbtb4-202ENSMUST00000108639 7811 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Pdlim7Q3TJD7 Ubxn4-201ENSMUST00000027592 4113 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Pdlim7Q3TJD7 Fnbp1-202ENSMUST00000075326 1761 ntTSL 5 BASIC13.92□□□□□ -0.18
Pdlim7Q3TJD7 Gm11509-201ENSMUST00000117358 325 ntBASIC13.92□□□□□ -0.18
Pdlim7Q3TJD7 Gm14724-201ENSMUST00000118400 537 ntBASIC13.92□□□□□ -0.18
Pdlim7Q3TJD7 Pcnp-203ENSMUST00000119981 901 ntTSL 3 BASIC13.92□□□□□ -0.18
Pdlim7Q3TJD7 Asb8-202ENSMUST00000123626 1100 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Pdlim7Q3TJD7 Asb8-203ENSMUST00000123922 1162 ntAPPRIS P1 TSL 3 BASIC13.92□□□□□ -0.18
Pdlim7Q3TJD7 Gm22144-201ENSMUST00000157402 102 ntBASIC13.92□□□□□ -0.18
Pdlim7Q3TJD7 Rpl41-203ENSMUST00000176683 437 ntAPPRIS P2 TSL 2 BASIC13.92□□□□□ -0.18
Pdlim7Q3TJD7 Mir6998-201ENSMUST00000183343 64 ntBASIC13.92□□□□□ -0.18
Pdlim7Q3TJD7 Timm10b-210ENSMUST00000209588 373 ntTSL 3 BASIC13.92□□□□□ -0.18
Pdlim7Q3TJD7 Gm3028-201ENSMUST00000213805 1119 ntBASIC13.92□□□□□ -0.18
Pdlim7Q3TJD7 Prss52-201ENSMUST00000022537 1064 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Pdlim7Q3TJD7 Gm9785-201ENSMUST00000062642 1006 ntBASIC13.92□□□□□ -0.18
Pdlim7Q3TJD7 Gm10288-201ENSMUST00000084614 537 ntBASIC13.92□□□□□ -0.18
Pdlim7Q3TJD7 Ifi27-205ENSMUST00000085065 977 ntAPPRIS ALT2 TSL 1 (best) BASIC13.92□□□□□ -0.18
Pdlim7Q3TJD7 F7-201ENSMUST00000033820 1859 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Pdlim7Q3TJD7 Hspa12b-201ENSMUST00000099349 3413 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Pdlim7Q3TJD7 Mcm8-201ENSMUST00000028831 3179 ntAPPRIS ALT2 TSL 1 (best) BASIC13.92□□□□□ -0.18
Pdlim7Q3TJD7 Mthfsd-210ENSMUST00000139782 1366 ntTSL 5 BASIC13.92□□□□□ -0.18
Pdlim7Q3TJD7 Arnt-203ENSMUST00000102749 2699 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Pdlim7Q3TJD7 Sec24a-204ENSMUST00000109097 6581 ntAPPRIS P3 TSL 1 (best) BASIC13.92□□□□□ -0.18
Pdlim7Q3TJD7 Col26a1-202ENSMUST00000111103 2781 ntAPPRIS ALT2 TSL 1 (best) BASIC13.92□□□□□ -0.18
Pdlim7Q3TJD7 Rgs6-209ENSMUST00000186848 1472 ntTSL 5 BASIC13.92□□□□□ -0.18
Pdlim7Q3TJD7 Gm12248-202ENSMUST00000218429 1462 ntAPPRIS ALT2 TSL 5 BASIC13.92□□□□□ -0.18
Pdlim7Q3TJD7 Gm7002-201ENSMUST00000221386 2165 ntBASIC13.92□□□□□ -0.18
Pdlim7Q3TJD7 Gm38577-201ENSMUST00000221531 4545 ntBASIC13.92□□□□□ -0.18
Pdlim7Q3TJD7 Baiap2l1-201ENSMUST00000055190 3247 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Pdlim7Q3TJD7 Egr3-204ENSMUST00000225200 3940 ntAPPRIS P2 BASIC13.92□□□□□ -0.18
Pdlim7Q3TJD7 Tspan32-201ENSMUST00000009396 1582 ntAPPRIS ALT2 TSL 1 (best) BASIC13.92□□□□□ -0.18
Pdlim7Q3TJD7 Slc5a11-201ENSMUST00000033035 2396 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Pdlim7Q3TJD7 2700080J24Rik-201ENSMUST00000205314 1662 ntBASIC13.91□□□□□ -0.18
Pdlim7Q3TJD7 Rab15-201ENSMUST00000021459 3158 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Pdlim7Q3TJD7 Ddx23-201ENSMUST00000003450 3187 ntAPPRIS P1 TSL 5 BASIC13.91□□□□□ -0.18
Pdlim7Q3TJD7 Necap1-201ENSMUST00000032477 2476 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Pdlim7Q3TJD7 Zkscan3-207ENSMUST00000223831 2101 ntBASIC13.91□□□□□ -0.18
Pdlim7Q3TJD7 Ubn1-201ENSMUST00000052449 6455 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Pdlim7Q3TJD7 Gm28719-201ENSMUST00000187779 1757 ntBASIC13.91□□□□□ -0.18
Pdlim7Q3TJD7 Ube3b-201ENSMUST00000074002 5194 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Pdlim7Q3TJD7 D930019O06Rik-201ENSMUST00000181841 3663 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
Pdlim7Q3TJD7 Notch3-201ENSMUST00000087723 8044 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Pdlim7Q3TJD7 Lins1-202ENSMUST00000077967 2647 ntAPPRIS ALT2 TSL 2 BASIC13.91□□□□□ -0.18
Pdlim7Q3TJD7 Chrdl1-203ENSMUST00000112878 4050 ntAPPRIS ALT2 TSL 5 BASIC13.91□□□□□ -0.18
Pdlim7Q3TJD7 Cdk5rap1-203ENSMUST00000109731 2160 ntAPPRIS P1 TSL 5 BASIC13.91□□□□□ -0.18
Pdlim7Q3TJD7 Dlgap1-211ENSMUST00000148486 5276 ntAPPRIS ALT2 TSL 1 (best) BASIC13.91□□□□□ -0.18
Pdlim7Q3TJD7 Gm14585-201ENSMUST00000120713 634 ntBASIC13.91□□□□□ -0.18
Pdlim7Q3TJD7 Agtpbp1-216ENSMUST00000168821 721 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
Pdlim7Q3TJD7 Ighv1-48-201ENSMUST00000191795 294 ntBASIC13.91□□□□□ -0.18
Pdlim7Q3TJD7 8030442B05Rik-201ENSMUST00000192626 1035 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
Pdlim7Q3TJD7 Gm5852-201ENSMUST00000194119 1021 ntBASIC13.91□□□□□ -0.18
Pdlim7Q3TJD7 Gm5542-201ENSMUST00000195485 1089 ntBASIC13.91□□□□□ -0.18
Pdlim7Q3TJD7 Gm2965-201ENSMUST00000198365 343 ntBASIC13.91□□□□□ -0.18
Pdlim7Q3TJD7 Gm34821-201ENSMUST00000208399 1031 ntTSL 5 BASIC13.91□□□□□ -0.18
Pdlim7Q3TJD7 Gm45338-201ENSMUST00000209198 820 ntTSL 5 BASIC13.91□□□□□ -0.18
Pdlim7Q3TJD7 AC122408.1-201ENSMUST00000218949 218 ntBASIC13.91□□□□□ -0.18
Pdlim7Q3TJD7 Polr2d-201ENSMUST00000025106 956 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Pdlim7Q3TJD7 1810009A15Rik-201ENSMUST00000096251 806 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Pdlim7Q3TJD7 Gm815-201ENSMUST00000099536 610 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Pdlim7Q3TJD7 Gm6210-201ENSMUST00000204734 1942 ntBASIC13.91□□□□□ -0.18
Pdlim7Q3TJD7 Gm45342-201ENSMUST00000210903 1363 ntBASIC13.91□□□□□ -0.18
Pdlim7Q3TJD7 Klk1b16-201ENSMUST00000005933 1387 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Pdlim7Q3TJD7 Gm13003-201ENSMUST00000151040 2904 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
Pdlim7Q3TJD7 Dhx9-201ENSMUST00000042141 4616 ntAPPRIS ALT2 TSL 5 BASIC13.91□□□□□ -0.18
Pdlim7Q3TJD7 Prss36-202ENSMUST00000118755 3028 ntAPPRIS P2 TSL 5 BASIC13.9□□□□□ -0.18
Pdlim7Q3TJD7 Tectb-202ENSMUST00000120936 1349 ntTSL 5 BASIC13.9□□□□□ -0.18
Pdlim7Q3TJD7 Cyp2c53-ps-203ENSMUST00000176493 1443 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
Pdlim7Q3TJD7 Gm36855-203ENSMUST00000216660 1406 ntTSL 5 BASIC13.9□□□□□ -0.18
Pdlim7Q3TJD7 Pmp2-201ENSMUST00000029034 1408 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Pdlim7Q3TJD7 Dmtn-201ENSMUST00000022694 5418 ntAPPRIS ALT1 TSL 5 BASIC13.9□□□□□ -0.18
Pdlim7Q3TJD7 Efcab14-203ENSMUST00000106524 1544 ntAPPRIS ALT2 TSL 5 BASIC13.9□□□□□ -0.18
Pdlim7Q3TJD7 Anks1b-231ENSMUST00000183136 2786 ntTSL 5 BASIC13.9□□□□□ -0.18
Pdlim7Q3TJD7 Hvcn1-201ENSMUST00000072602 2790 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Pdlim7Q3TJD7 Luc7l2-207ENSMUST00000161227 2405 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
Pdlim7Q3TJD7 Tpgs2-201ENSMUST00000115817 4159 ntAPPRIS P3 TSL 1 (best) BASIC13.9□□□□□ -0.18
Pdlim7Q3TJD7 Ska1-202ENSMUST00000177604 2605 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Pdlim7Q3TJD7 Tcf25-201ENSMUST00000057934 2738 ntAPPRIS P3 TSL 1 (best) BASIC13.9□□□□□ -0.18
Pdlim7Q3TJD7 Usp16-201ENSMUST00000026710 3205 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Pdlim7Q3TJD7 Ddi2-202ENSMUST00000177592 3539 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
Pdlim7Q3TJD7 Zfp367-201ENSMUST00000059817 3532 ntAPPRIS P2 TSL 1 (best) BASIC13.9□□□□□ -0.18
Pdlim7Q3TJD7 Rab3d-201ENSMUST00000115351 3835 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Pdlim7Q3TJD7 Gm12857-201ENSMUST00000117678 592 ntBASIC13.9□□□□□ -0.18
Pdlim7Q3TJD7 Cd63-ps-202ENSMUST00000154992 717 ntBASIC13.9□□□□□ -0.18
Retrieved 100 of 76,532 protein–RNA pairs in 27.3 ms