Protein–RNA interactions for Protein: P68404

Prkcb, Protein kinase C beta type, mousemouse

Predictions only

Length 671 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PrkcbP68404 Tspyl3-201ENSMUST00000099194 3072 ntAPPRIS P1 BASIC13.48□□□□□ -0.25
PrkcbP68404 Tmem25-201ENSMUST00000002100 2448 ntAPPRIS P2 TSL 1 (best) BASIC13.48□□□□□ -0.25
PrkcbP68404 Taok2-202ENSMUST00000117394 4985 ntAPPRIS P4 TSL 1 (best) BASIC13.48□□□□□ -0.25
PrkcbP68404 Dpm2-203ENSMUST00000140592 1412 ntTSL 5 BASIC13.47□□□□□ -0.25
PrkcbP68404 Gm44929-202ENSMUST00000209134 1653 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
PrkcbP68404 Smad4-202ENSMUST00000114939 2233 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
PrkcbP68404 Aida-201ENSMUST00000109166 4279 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
PrkcbP68404 Gm4735-201ENSMUST00000138679 1302 ntBASIC13.47□□□□□ -0.25
PrkcbP68404 Gm5855-201ENSMUST00000200240 1305 ntBASIC13.47□□□□□ -0.25
PrkcbP68404 Prr15l-201ENSMUST00000054311 1342 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
PrkcbP68404 Dnmbp-202ENSMUST00000212032 5074 ntAPPRIS ALT2 TSL 5 BASIC13.47□□□□□ -0.25
PrkcbP68404 Tbkbp1-201ENSMUST00000066078 3338 ntAPPRIS ALT2 TSL 5 BASIC13.47□□□□□ -0.25
PrkcbP68404 Synpo-209ENSMUST00000143275 5040 ntAPPRIS ALT2 TSL 5 BASIC13.47□□□□□ -0.25
PrkcbP68404 Gm24934-201ENSMUST00000103764 111 ntBASIC13.47□□□□□ -0.25
PrkcbP68404 Gm25700-201ENSMUST00000177693 110 ntBASIC13.47□□□□□ -0.25
PrkcbP68404 Gm11523-203ENSMUST00000184482 802 ntTSL 3 BASIC13.47□□□□□ -0.25
PrkcbP68404 Ralgps2-214ENSMUST00000191605 2958 ntAPPRIS P3 TSL 1 (best) BASIC13.47□□□□□ -0.25
PrkcbP68404 Gm9678-201ENSMUST00000198979 1149 ntBASIC13.47□□□□□ -0.25
PrkcbP68404 Gm43050-201ENSMUST00000201062 338 ntTSL 2 BASIC13.47□□□□□ -0.25
PrkcbP68404 Gm45691-201ENSMUST00000206905 1120 ntBASIC13.47□□□□□ -0.25
PrkcbP68404 Gm44651-201ENSMUST00000207343 372 ntBASIC13.47□□□□□ -0.25
PrkcbP68404 Gm7293-201ENSMUST00000216682 1007 ntBASIC13.47□□□□□ -0.25
PrkcbP68404 Gm3898-202ENSMUST00000216905 328 ntTSL 2 BASIC13.47□□□□□ -0.25
PrkcbP68404 CT573034.1-201ENSMUST00000222983 313 ntBASIC13.47□□□□□ -0.25
PrkcbP68404 AC123665.1-201ENSMUST00000228204 438 ntBASIC13.47□□□□□ -0.25
PrkcbP68404 Pglyrp1-201ENSMUST00000032573 694 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
PrkcbP68404 Elovl1-202ENSMUST00000067896 1137 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
PrkcbP68404 Nme8-202ENSMUST00000091763 2122 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
PrkcbP68404 Ppfia4-201ENSMUST00000168515 6067 ntAPPRIS P2 TSL 1 (best) BASIC13.47□□□□□ -0.25
PrkcbP68404 Gm44942-201ENSMUST00000096093 2072 ntBASIC13.47□□□□□ -0.25
PrkcbP68404 Lins1-202ENSMUST00000077967 2647 ntAPPRIS ALT2 TSL 2 BASIC13.47□□□□□ -0.25
PrkcbP68404 Cdv3-203ENSMUST00000116517 3741 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
PrkcbP68404 Leprot-202ENSMUST00000106927 1754 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
PrkcbP68404 Gm16958-201ENSMUST00000180603 1765 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
PrkcbP68404 Scube1-203ENSMUST00000076060 3913 ntAPPRIS ALT2 TSL 1 (best) BASIC13.47□□□□□ -0.25
PrkcbP68404 Trim50-202ENSMUST00000111180 1456 ntAPPRIS ALT2 TSL 1 (best) BASIC13.47□□□□□ -0.25
PrkcbP68404 Trp63-204ENSMUST00000115305 1729 ntAPPRIS ALT1 TSL 1 (best) BASIC13.47□□□□□ -0.25
PrkcbP68404 Eif1ax-201ENSMUST00000087143 5172 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
PrkcbP68404 Brwd1-201ENSMUST00000023631 8209 ntAPPRIS ALT2 TSL 1 (best) BASIC13.47□□□□□ -0.25
PrkcbP68404 Cd34-201ENSMUST00000016638 2454 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
PrkcbP68404 Gm18626-201ENSMUST00000221512 1409 ntBASIC13.47□□□□□ -0.25
PrkcbP68404 Tctn3-203ENSMUST00000135795 1686 ntAPPRIS ALT2 TSL 1 (best) BASIC13.47□□□□□ -0.25
PrkcbP68404 D330041H03Rik-205ENSMUST00000181014 1903 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
PrkcbP68404 AC126262.1-201ENSMUST00000221802 1904 ntBASIC13.47□□□□□ -0.25
PrkcbP68404 Dcaf7-201ENSMUST00000058438 5750 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
PrkcbP68404 Igf2-204ENSMUST00000105936 3970 ntAPPRIS P1 TSL 2 BASIC13.47□□□□□ -0.25
PrkcbP68404 Gm14123-201ENSMUST00000156345 2658 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
PrkcbP68404 Prickle1-202ENSMUST00000109255 4144 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
PrkcbP68404 Dtnb-223ENSMUST00000174547 2112 ntTSL 5 BASIC13.46□□□□□ -0.25
PrkcbP68404 Gm45765-202ENSMUST00000212921 1313 ntTSL 5 BASIC13.46□□□□□ -0.25
PrkcbP68404 Tbc1d22a-201ENSMUST00000063414 3229 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
PrkcbP68404 Stau2-214ENSMUST00000162007 2964 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
PrkcbP68404 Cbarp-214ENSMUST00000169546 2980 ntAPPRIS ALT2 TSL 5 BASIC13.46□□□□□ -0.25
PrkcbP68404 Kcnj12-203ENSMUST00000108717 2463 ntAPPRIS P3 TSL 1 (best) BASIC13.46□□□□□ -0.25
PrkcbP68404 Abca3-201ENSMUST00000039013 6476 ntAPPRIS P2 TSL 1 (best) BASIC13.46□□□□□ -0.25
PrkcbP68404 Cela2a-201ENSMUST00000102481 1070 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
PrkcbP68404 Rbm3-202ENSMUST00000115615 1183 ntAPPRIS ALT1 TSL 1 (best) BASIC13.46□□□□□ -0.25
PrkcbP68404 Rbm3-203ENSMUST00000115616 1225 ntAPPRIS P3 TSL 1 (best) BASIC13.46□□□□□ -0.25
PrkcbP68404 Gm12015-201ENSMUST00000117065 843 ntBASIC13.46□□□□□ -0.25
PrkcbP68404 Gm4760-201ENSMUST00000119663 1030 ntBASIC13.46□□□□□ -0.25
PrkcbP68404 Dnajc25-204ENSMUST00000152199 1141 ntTSL 5 BASIC13.46□□□□□ -0.25
PrkcbP68404 Gm5070-201ENSMUST00000177599 862 ntBASIC13.46□□□□□ -0.25
PrkcbP68404 Gm2383-201ENSMUST00000181461 807 ntBASIC13.46□□□□□ -0.25
PrkcbP68404 Gm8856-201ENSMUST00000185254 1144 ntBASIC13.46□□□□□ -0.25
PrkcbP68404 Gm28511-201ENSMUST00000191594 450 ntTSL 3 BASIC13.46□□□□□ -0.25
PrkcbP68404 Sox2ot-207ENSMUST00000196987 727 ntTSL 3 BASIC13.46□□□□□ -0.25
PrkcbP68404 Treml1-205ENSMUST00000225849 974 ntAPPRIS ALT2 BASIC13.46□□□□□ -0.25
PrkcbP68404 Nppc-201ENSMUST00000027449 1042 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
PrkcbP68404 Klk1b27-201ENSMUST00000079859 889 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
PrkcbP68404 Vmn1r197-201ENSMUST00000091734 897 ntAPPRIS P1 BASIC13.46□□□□□ -0.25
PrkcbP68404 Msh4-201ENSMUST00000005630 3325 ntAPPRIS P3 TSL 1 (best) BASIC13.46□□□□□ -0.25
PrkcbP68404 Cep164-201ENSMUST00000117194 5541 ntAPPRIS P2 TSL 5 BASIC13.46□□□□□ -0.25
PrkcbP68404 Cavin1-201ENSMUST00000060792 3491 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.26
PrkcbP68404 Rph3al-201ENSMUST00000021208 1690 ntTSL 1 (best) BASIC13.46□□□□□ -0.26
PrkcbP68404 Ccdc85a-204ENSMUST00000109502 5220 ntTSL 1 (best) BASIC13.46□□□□□ -0.26
PrkcbP68404 Hacd2-201ENSMUST00000061156 3603 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.26
PrkcbP68404 Ext1-201ENSMUST00000077273 7663 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.26
PrkcbP68404 Bcl6-201ENSMUST00000023151 3525 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.26
PrkcbP68404 Myh13-202ENSMUST00000108684 6062 ntAPPRIS P1 TSL 5 BASIC13.46□□□□□ -0.26
PrkcbP68404 Tmem104-202ENSMUST00000100235 4561 ntAPPRIS ALT1 TSL 1 (best) BASIC13.46□□□□□ -0.26
PrkcbP68404 Inpp5e-205ENSMUST00000145701 4147 ntAPPRIS P3 TSL 1 (best) BASIC13.45□□□□□ -0.26
PrkcbP68404 Ints5-201ENSMUST00000096249 3294 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
PrkcbP68404 Zfp369-203ENSMUST00000130799 1580 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
PrkcbP68404 Zp1-201ENSMUST00000025641 1963 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
PrkcbP68404 Nfe2l1-204ENSMUST00000107659 2351 ntAPPRIS ALT2 TSL 1 (best) BASIC13.45□□□□□ -0.26
PrkcbP68404 Sesn3-204ENSMUST00000208222 9125 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
PrkcbP68404 Usp53-202ENSMUST00000197314 3586 ntTSL 5 BASIC13.45□□□□□ -0.26
PrkcbP68404 Urgcp-204ENSMUST00000120306 3972 ntAPPRIS ALT2 TSL 1 (best) BASIC13.45□□□□□ -0.26
PrkcbP68404 Pggt1b-201ENSMUST00000025354 2736 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
PrkcbP68404 Cacna2d1-209ENSMUST00000199704 3861 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
PrkcbP68404 Gm42416-201ENSMUST00000115661 2856 ntAPPRIS P1 TSL 2 BASIC13.45□□□□□ -0.26
PrkcbP68404 Rnf4-201ENSMUST00000030992 2895 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
PrkcbP68404 Phyhd1-212ENSMUST00000154647 1678 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
PrkcbP68404 Gm43908-201ENSMUST00000205074 1472 ntBASIC13.45□□□□□ -0.26
PrkcbP68404 Eif3i-201ENSMUST00000102593 1123 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
PrkcbP68404 Pom121l12-201ENSMUST00000117584 1039 ntAPPRIS P1 BASIC13.45□□□□□ -0.26
PrkcbP68404 Gm14130-201ENSMUST00000118417 987 ntBASIC13.45□□□□□ -0.26
PrkcbP68404 Rap1a-ps2-201ENSMUST00000118467 559 ntBASIC13.45□□□□□ -0.26
PrkcbP68404 Dctn6-203ENSMUST00000118811 934 ntTSL 3 BASIC13.45□□□□□ -0.26
PrkcbP68404 Gm14508-201ENSMUST00000127049 901 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
Retrieved 100 of 76,532 protein–RNA pairs in 47 ms