Protein–RNA interactions for Protein: P62311

Lsm3, U6 snRNA-associated Sm-like protein LSm3, mousemouse

Known RBP Predictions only

Length 102 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lsm3P62311 Mark3-208ENSMUST00000221753 2394 ntTSL 5 BASIC11.32□□□□□ -0.6
Lsm3P62311 Zfp235-201ENSMUST00000056549 3373 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Lsm3P62311 Jak3-202ENSMUST00000110012 3774 ntAPPRIS P1 TSL 5 BASIC11.32□□□□□ -0.6
Lsm3P62311 Hoxb9-202ENSMUST00000174042 2269 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
Lsm3P62311 Tnfaip8l3-201ENSMUST00000098760 4403 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Lsm3P62311 Scaf4-202ENSMUST00000163419 4169 ntAPPRIS ALT2 TSL 1 (best) BASIC11.32□□□□□ -0.6
Lsm3P62311 Hao1-201ENSMUST00000028704 2045 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Lsm3P62311 Ntng1-208ENSMUST00000133268 5587 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
Lsm3P62311 Aamp-202ENSMUST00000178235 1756 ntAPPRIS ALT1 TSL 5 BASIC11.32□□□□□ -0.6
Lsm3P62311 Gm45776-201ENSMUST00000212366 1522 ntBASIC11.32□□□□□ -0.6
Lsm3P62311 Dixdc1-203ENSMUST00000117646 5719 ntAPPRIS P1 TSL 5 BASIC11.32□□□□□ -0.6
Lsm3P62311 Nudt1-203ENSMUST00000110825 599 ntTSL 2 BASIC11.32□□□□□ -0.6
Lsm3P62311 Olfr1564-201ENSMUST00000112162 1091 ntAPPRIS P2 BASIC11.32□□□□□ -0.6
Lsm3P62311 Gm8410-201ENSMUST00000117225 605 ntBASIC11.32□□□□□ -0.6
Lsm3P62311 Cmc2-202ENSMUST00000128304 394 ntTSL 5 BASIC11.32□□□□□ -0.6
Lsm3P62311 Rpl18a-ps1-201ENSMUST00000161190 523 ntBASIC11.32□□□□□ -0.6
Lsm3P62311 Rims3-204ENSMUST00000171363 977 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Lsm3P62311 Hoga1-204ENSMUST00000172244 631 ntTSL 5 BASIC11.32□□□□□ -0.6
Lsm3P62311 Nnat-209ENSMUST00000173793 386 ntTSL 5 BASIC11.32□□□□□ -0.6
Lsm3P62311 Gm36972-201ENSMUST00000194000 676 ntTSL 3 BASIC11.32□□□□□ -0.6
Lsm3P62311 AC073947.2-201ENSMUST00000215888 1130 ntBASIC11.32□□□□□ -0.6
Lsm3P62311 Olfr272-201ENSMUST00000051600 962 ntAPPRIS P1 BASIC11.32□□□□□ -0.6
Lsm3P62311 Pdzk1-201ENSMUST00000058865 2406 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Lsm3P62311 Hap1-202ENSMUST00000138603 3316 ntAPPRIS ALT2 TSL 5 BASIC11.32□□□□□ -0.6
Lsm3P62311 Cdk5rap1-203ENSMUST00000109731 2160 ntAPPRIS P1 TSL 5 BASIC11.32□□□□□ -0.6
Lsm3P62311 Fam214a-205ENSMUST00000215370 4205 ntAPPRIS ALT2 TSL 5 BASIC11.32□□□□□ -0.6
Lsm3P62311 Hexim1-201ENSMUST00000053063 3495 ntAPPRIS P1 BASIC11.32□□□□□ -0.6
Lsm3P62311 Sox9-201ENSMUST00000000579 4135 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Lsm3P62311 Gm10371-201ENSMUST00000127429 1411 ntTSL 2 BASIC11.32□□□□□ -0.6
Lsm3P62311 Scml2-206ENSMUST00000112345 4847 ntAPPRIS ALT2 TSL 5 BASIC11.32□□□□□ -0.6
Lsm3P62311 Tmcc1-210ENSMUST00000204353 2851 ntAPPRIS ALT2 TSL 1 (best) BASIC11.32□□□□□ -0.6
Lsm3P62311 Trim35-201ENSMUST00000022623 3678 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Lsm3P62311 Cdc42ep4-202ENSMUST00000106616 3405 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Lsm3P62311 Psmc5-201ENSMUST00000021049 1316 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Lsm3P62311 Gabrg3-201ENSMUST00000068394 1724 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
Lsm3P62311 Gper1-201ENSMUST00000066211 2537 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Lsm3P62311 Rspo2-201ENSMUST00000063492 3338 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Lsm3P62311 Rnf25-202ENSMUST00000113721 1451 ntAPPRIS ALT1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Lsm3P62311 Cdh20-201ENSMUST00000062528 4012 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Lsm3P62311 AC211878.3-201ENSMUST00000222629 2018 ntBASIC11.31□□□□□ -0.6
Lsm3P62311 Klhl29-202ENSMUST00000218384 2716 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
Lsm3P62311 Knop1-206ENSMUST00000126792 3253 ntAPPRIS ALT2 TSL 1 (best) BASIC11.31□□□□□ -0.6
Lsm3P62311 Sema5b-201ENSMUST00000050625 4350 ntAPPRIS P2 TSL 1 (best) BASIC11.31□□□□□ -0.6
Lsm3P62311 Plekha1-202ENSMUST00000075181 2301 ntAPPRIS P2 TSL 1 (best) BASIC11.31□□□□□ -0.6
Lsm3P62311 Eef2k-201ENSMUST00000047875 6580 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Lsm3P62311 Phactr2-201ENSMUST00000079698 1934 ntAPPRIS ALT2 TSL 5 BASIC11.31□□□□□ -0.6
Lsm3P62311 Slc29a1-213ENSMUST00000167692 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC11.31□□□□□ -0.6
Lsm3P62311 Gm44260-201ENSMUST00000204946 2094 ntBASIC11.31□□□□□ -0.6
Lsm3P62311 Mmel1-202ENSMUST00000080559 2926 ntAPPRIS ALT2 TSL 5 BASIC11.31□□□□□ -0.6
Lsm3P62311 Gm43720-201ENSMUST00000159067 6411 ntAPPRIS P1 TSL 5 BASIC11.31□□□□□ -0.6
Lsm3P62311 Col24a1-201ENSMUST00000029848 7143 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Lsm3P62311 Ripk3-202ENSMUST00000168716 1964 ntTSL 5 BASIC11.31□□□□□ -0.6
Lsm3P62311 Ptpn4-201ENSMUST00000064091 10874 ntAPPRIS P1 TSL 5 BASIC11.31□□□□□ -0.6
Lsm3P62311 Gm15317-201ENSMUST00000129569 699 ntTSL 3 BASIC11.31□□□□□ -0.6
Lsm3P62311 Mroh1-217ENSMUST00000162319 1244 ntAPPRIS ALT2 TSL 5 BASIC11.31□□□□□ -0.6
Lsm3P62311 Thap4-205ENSMUST00000189728 713 ntTSL 2 BASIC11.31□□□□□ -0.6
Lsm3P62311 Gm17795-201ENSMUST00000214505 757 ntBASIC11.31□□□□□ -0.6
Lsm3P62311 Cela1-201ENSMUST00000023775 1103 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Lsm3P62311 Ucn-201ENSMUST00000043475 504 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Lsm3P62311 Pdlim7-203ENSMUST00000069968 1006 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
Lsm3P62311 Gtpbp10-201ENSMUST00000088842 941 ntTSL 5 BASIC11.31□□□□□ -0.6
Lsm3P62311 Gm815-201ENSMUST00000099536 610 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Lsm3P62311 Nek1-208ENSMUST00000211256 4810 ntAPPRIS ALT2 TSL 1 (best) BASIC11.31□□□□□ -0.6
Lsm3P62311 Rnf144a-202ENSMUST00000062149 4812 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Lsm3P62311 Wif1-201ENSMUST00000020439 2294 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Lsm3P62311 1700019D03Rik-202ENSMUST00000114492 3565 ntAPPRIS P1 TSL 3 BASIC11.31□□□□□ -0.6
Lsm3P62311 5031434O11Rik-201ENSMUST00000180404 3731 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
Lsm3P62311 Ppp4r1-201ENSMUST00000073104 3850 ntAPPRIS P3 TSL 1 (best) BASIC11.31□□□□□ -0.6
Lsm3P62311 Eml5-201ENSMUST00000065716 9482 ntTSL 5 BASIC11.31□□□□□ -0.6
Lsm3P62311 Galr1-201ENSMUST00000065224 2871 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Lsm3P62311 Tnc-201ENSMUST00000030056 6833 ntAPPRIS P2 TSL 1 (best) BASIC11.31□□□□□ -0.6
Lsm3P62311 Plekhm1-201ENSMUST00000041272 5968 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Lsm3P62311 Slc9a3-203ENSMUST00000221703 5118 ntAPPRIS ALT2 TSL 5 BASIC11.31□□□□□ -0.6
Lsm3P62311 Fam110b-201ENSMUST00000054857 3210 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Lsm3P62311 Miga2-201ENSMUST00000077977 3381 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Lsm3P62311 Cnbp-209ENSMUST00000204890 1614 ntAPPRIS ALT1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Lsm3P62311 Ccdc89-201ENSMUST00000061391 2093 ntAPPRIS P1 BASIC11.31□□□□□ -0.6
Lsm3P62311 Cald1-205ENSMUST00000115027 4777 ntTSL 5 BASIC11.31□□□□□ -0.6
Lsm3P62311 Mob3b-201ENSMUST00000102975 6030 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Lsm3P62311 Tonsl-207ENSMUST00000168185 4235 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
Lsm3P62311 Tmem168-206ENSMUST00000149123 3337 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
Lsm3P62311 Zfp108-203ENSMUST00000206777 2562 ntAPPRIS P2 TSL 1 (best) BASIC11.3□□□□□ -0.6
Lsm3P62311 Gm21038-201ENSMUST00000222205 1383 ntBASIC11.3□□□□□ -0.6
Lsm3P62311 Tmem116-203ENSMUST00000094357 1366 ntAPPRIS ALT2 TSL 5 BASIC11.3□□□□□ -0.6
Lsm3P62311 AC153506.1-201ENSMUST00000218768 2915 ntBASIC11.3□□□□□ -0.6
Lsm3P62311 Abcb8-201ENSMUST00000073076 2939 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Lsm3P62311 Accs-201ENSMUST00000041593 2036 ntAPPRIS P3 TSL 1 (best) BASIC11.3□□□□□ -0.6
Lsm3P62311 Cryz-208ENSMUST00000192462 2505 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Lsm3P62311 Vcp-201ENSMUST00000030164 3316 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Lsm3P62311 Nubp2-201ENSMUST00000044252 1430 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Lsm3P62311 Arpp21-223ENSMUST00000162097 3952 ntAPPRIS P1 TSL 5 BASIC11.3□□□□□ -0.6
Lsm3P62311 H2af-ps-201ENSMUST00000119066 295 ntBASIC11.3□□□□□ -0.6
Lsm3P62311 Ecscr-204ENSMUST00000133064 1055 ntAPPRIS ALT2 TSL 2 BASIC11.3□□□□□ -0.6
Lsm3P62311 Gm11788-201ENSMUST00000142520 562 ntTSL 3 BASIC11.3□□□□□ -0.6
Lsm3P62311 Mir6990-201ENSMUST00000183724 91 ntBASIC11.3□□□□□ -0.6
Lsm3P62311 Gm27533-201ENSMUST00000183800 152 ntBASIC11.3□□□□□ -0.6
Lsm3P62311 Gm27494-201ENSMUST00000184735 189 ntBASIC11.3□□□□□ -0.6
Lsm3P62311 Gm4610-201ENSMUST00000198222 905 ntTSL 5 BASIC11.3□□□□□ -0.6
Lsm3P62311 Nmur1-202ENSMUST00000212058 1287 ntAPPRIS P3 TSL 5 BASIC11.3□□□□□ -0.6
Lsm3P62311 Rps10-201ENSMUST00000025052 519 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
Retrieved 100 of 76,532 protein–RNA pairs in 31.1 ms