Protein–RNA interactions for Protein: P56873

Sssca1, Sjoegren syndrome/scleroderma autoantigen 1 homolog, mousemouse

Predictions only

Length 199 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sssca1P56873 Retreg1-206ENSMUST00000228306 1430 ntBASIC10.07□□□□□ -0.8
Sssca1P56873 Hnrnpf-209ENSMUST00000180020 2280 ntAPPRIS P1 TSL 1 (best) BASIC10.07□□□□□ -0.8
Sssca1P56873 Robo3-201ENSMUST00000034643 4712 ntAPPRIS ALT2 TSL 5 BASIC10.07□□□□□ -0.8
Sssca1P56873 Ehd3-201ENSMUST00000024860 3658 ntAPPRIS P1 TSL 1 (best) BASIC10.06□□□□□ -0.8
Sssca1P56873 Frmpd2-203ENSMUST00000208577 5192 ntAPPRIS P1 TSL 5 BASIC10.06□□□□□ -0.8
Sssca1P56873 Gm45833-201ENSMUST00000211931 2730 ntTSL 5 BASIC10.06□□□□□ -0.8
Sssca1P56873 Plekhg5-204ENSMUST00000118648 3818 ntAPPRIS ALT2 TSL 5 BASIC10.06□□□□□ -0.8
Sssca1P56873 Gtf2ird1-224ENSMUST00000202280 3052 ntAPPRIS ALT2 TSL 5 BASIC10.06□□□□□ -0.8
Sssca1P56873 Rbm6-207ENSMUST00000183032 3716 ntAPPRIS ALT2 TSL 1 (best) BASIC10.06□□□□□ -0.8
Sssca1P56873 Dnmt3l-201ENSMUST00000000746 1676 ntAPPRIS P1 TSL 1 (best) BASIC10.06□□□□□ -0.8
Sssca1P56873 Epb41l2-204ENSMUST00000217929 3621 ntTSL 1 (best) BASIC10.06□□□□□ -0.8
Sssca1P56873 Dnaic2-201ENSMUST00000069325 2874 ntAPPRIS P1 TSL 5 BASIC10.06□□□□□ -0.8
Sssca1P56873 Chchd3-201ENSMUST00000066379 1550 ntAPPRIS P1 TSL 1 (best) BASIC10.06□□□□□ -0.8
Sssca1P56873 Als2cl-206ENSMUST00000155014 5150 ntAPPRIS P1 TSL 1 (best) BASIC10.06□□□□□ -0.8
Sssca1P56873 Mroh5-202ENSMUST00000110021 2145 ntAPPRIS ALT2 TSL 1 (best) BASIC10.06□□□□□ -0.8
Sssca1P56873 Sh3tc1-201ENSMUST00000070203 4549 ntAPPRIS P1 TSL 1 (best) BASIC10.06□□□□□ -0.8
Sssca1P56873 Sema3g-201ENSMUST00000090180 4540 ntAPPRIS P1 TSL 1 (best) BASIC10.06□□□□□ -0.8
Sssca1P56873 Emilin1-201ENSMUST00000031055 3852 ntAPPRIS P1 TSL 1 (best) BASIC10.06□□□□□ -0.8
Sssca1P56873 Gm12968-201ENSMUST00000138291 1454 ntTSL 1 (best) BASIC10.06□□□□□ -0.8
Sssca1P56873 Dnd1-201ENSMUST00000061522 1451 ntAPPRIS P1 TSL 1 (best) BASIC10.06□□□□□ -0.8
Sssca1P56873 Gm19434-201ENSMUST00000204330 2573 ntTSL 1 (best) BASIC10.06□□□□□ -0.8
Sssca1P56873 Fosb-202ENSMUST00000207334 3664 ntTSL 5 BASIC10.06□□□□□ -0.8
Sssca1P56873 Ube2j2-204ENSMUST00000105582 1394 ntTSL 1 (best) BASIC10.06□□□□□ -0.8
Sssca1P56873 Drd1-202ENSMUST00000221470 3576 ntAPPRIS ALT2 TSL 1 (best) BASIC10.06□□□□□ -0.8
Sssca1P56873 Tenm3-201ENSMUST00000033965 8961 ntAPPRIS P3 TSL 1 (best) BASIC10.06□□□□□ -0.8
Sssca1P56873 Prc1-206ENSMUST00000173824 2912 ntTSL 1 (best) BASIC10.06□□□□□ -0.8
Sssca1P56873 Ambra1-203ENSMUST00000099712 5021 ntAPPRIS P1 TSL 1 (best) BASIC10.06□□□□□ -0.8
Sssca1P56873 Mtmr12-202ENSMUST00000071993 3351 ntTSL 1 (best) BASIC10.06□□□□□ -0.8
Sssca1P56873 Cpsf4l-203ENSMUST00000106617 1123 ntTSL 1 (best) BASIC10.06□□□□□ -0.8
Sssca1P56873 Zfp637-202ENSMUST00000112859 421 ntTSL 2 BASIC10.06□□□□□ -0.8
Sssca1P56873 Gm8805-201ENSMUST00000117848 313 ntBASIC10.06□□□□□ -0.8
Sssca1P56873 Gm15920-201ENSMUST00000118998 402 ntBASIC10.06□□□□□ -0.8
Sssca1P56873 Gm14224-201ENSMUST00000147187 864 ntTSL 3 BASIC10.06□□□□□ -0.8
Sssca1P56873 2010015M23Rik-201ENSMUST00000181900 1199 ntTSL 1 (best) BASIC10.06□□□□□ -0.8
Sssca1P56873 Gm42921-201ENSMUST00000196670 655 ntTSL 2 BASIC10.06□□□□□ -0.8
Sssca1P56873 2310001H17Rik-206ENSMUST00000205051 676 ntTSL 3 BASIC10.06□□□□□ -0.8
Sssca1P56873 Gm8227-201ENSMUST00000223306 571 ntBASIC10.06□□□□□ -0.8
Sssca1P56873 Majin-201ENSMUST00000025699 1239 ntTSL 1 (best) BASIC10.06□□□□□ -0.8
Sssca1P56873 Hfe-201ENSMUST00000006787 516 ntTSL 5 BASIC10.06□□□□□ -0.8
Sssca1P56873 Hfe-203ENSMUST00000091707 816 ntTSL 5 BASIC10.06□□□□□ -0.8
Sssca1P56873 Rpl10-ps2-201ENSMUST00000098432 645 ntBASIC10.06□□□□□ -0.8
Sssca1P56873 Ebp-201ENSMUST00000033509 1743 ntAPPRIS P1 TSL 1 (best) BASIC10.06□□□□□ -0.8
Sssca1P56873 Pofut1-201ENSMUST00000049863 5600 ntAPPRIS P1 TSL 1 (best) BASIC10.06□□□□□ -0.8
Sssca1P56873 Mfsd9-201ENSMUST00000039672 3160 ntAPPRIS P1 TSL 1 (best) BASIC10.06□□□□□ -0.8
Sssca1P56873 Rbm6-201ENSMUST00000035201 3999 ntAPPRIS P3 TSL 1 (best) BASIC10.06□□□□□ -0.8
Sssca1P56873 Rsph3b-201ENSMUST00000024572 1614 ntAPPRIS P1 TSL 1 (best) BASIC10.06□□□□□ -0.8
Sssca1P56873 Pdhx-201ENSMUST00000011058 2506 ntAPPRIS P1 TSL 1 (best) BASIC10.06□□□□□ -0.8
Sssca1P56873 Exd1-201ENSMUST00000060009 6042 ntAPPRIS P1 TSL 1 (best) BASIC10.06□□□□□ -0.8
Sssca1P56873 Abi1-211ENSMUST00000149719 3303 ntAPPRIS ALT1 TSL 1 (best) BASIC10.06□□□□□ -0.8
Sssca1P56873 AC156031.2-201ENSMUST00000213107 3310 ntBASIC10.06□□□□□ -0.8
Sssca1P56873 Ccdc160-201ENSMUST00000101588 1536 ntAPPRIS P1 TSL 1 (best) BASIC10.06□□□□□ -0.8
Sssca1P56873 Ppp1r3b-204ENSMUST00000211648 4386 ntAPPRIS P1 TSL 3 BASIC10.06□□□□□ -0.8
Sssca1P56873 Arhgap33-201ENSMUST00000044338 4280 ntAPPRIS P3 TSL 1 (best) BASIC10.06□□□□□ -0.8
Sssca1P56873 Ush1c-209ENSMUST00000222454 2580 ntAPPRIS ALT2 TSL 5 BASIC10.06□□□□□ -0.8
Sssca1P56873 Chtop-201ENSMUST00000001043 3257 ntTSL 1 (best) BASIC10.06□□□□□ -0.8
Sssca1P56873 Pla2g2f-201ENSMUST00000030526 2465 ntAPPRIS P1 TSL 1 (best) BASIC10.06□□□□□ -0.8
Sssca1P56873 Spag8-202ENSMUST00000107870 1342 ntAPPRIS P3 TSL 1 (best) BASIC10.06□□□□□ -0.8
Sssca1P56873 Nmral1-203ENSMUST00000115851 1306 ntTSL 1 (best) BASIC10.06□□□□□ -0.8
Sssca1P56873 Dsc2-202ENSMUST00000075214 4508 ntAPPRIS ALT2 TSL 5 BASIC10.05□□□□□ -0.8
Sssca1P56873 Serpinf2-202ENSMUST00000108437 2179 ntAPPRIS P1 TSL 1 (best) BASIC10.05□□□□□ -0.8
Sssca1P56873 Gm14685-202ENSMUST00000179117 2773 ntAPPRIS P1 TSL 1 (best) BASIC10.05□□□□□ -0.8
Sssca1P56873 Gng7-203ENSMUST00000117805 3382 ntAPPRIS ALT1 TSL 1 (best) BASIC10.05□□□□□ -0.8
Sssca1P56873 Aff3-203ENSMUST00000095027 5857 ntAPPRIS P2 TSL 5 BASIC10.05□□□□□ -0.8
Sssca1P56873 Cdip1-203ENSMUST00000118703 2554 ntAPPRIS P1 TSL 1 (best) BASIC10.05□□□□□ -0.8
Sssca1P56873 Wasf2-202ENSMUST00000105912 2236 ntAPPRIS P1 TSL 1 (best) BASIC10.05□□□□□ -0.8
Sssca1P56873 Slc22a5-201ENSMUST00000019044 3062 ntAPPRIS P1 TSL 1 (best) BASIC10.05□□□□□ -0.8
Sssca1P56873 Bicra-204ENSMUST00000210781 5975 ntAPPRIS P1 TSL 5 BASIC10.05□□□□□ -0.8
Sssca1P56873 Tspan32-202ENSMUST00000075172 1876 ntAPPRIS P3 TSL 1 (best) BASIC10.05□□□□□ -0.8
Sssca1P56873 Gm18983-201ENSMUST00000222884 2729 ntBASIC10.05□□□□□ -0.8
Sssca1P56873 Nynrin-201ENSMUST00000100529 6990 ntAPPRIS P1 TSL 1 (best) BASIC10.05□□□□□ -0.8
Sssca1P56873 Boll-202ENSMUST00000114423 1106 ntTSL 1 (best) BASIC10.05□□□□□ -0.8
Sssca1P56873 Gm14760-201ENSMUST00000121831 999 ntBASIC10.05□□□□□ -0.8
Sssca1P56873 Gm15479-201ENSMUST00000139309 1133 ntTSL 1 (best) BASIC10.05□□□□□ -0.8
Sssca1P56873 Fbxw4-204ENSMUST00000160018 931 ntTSL 3 BASIC10.05□□□□□ -0.8
Sssca1P56873 Atp5j2-202ENSMUST00000161741 955 ntAPPRIS P1 TSL 1 (best) BASIC10.05□□□□□ -0.8
Sssca1P56873 Cryaa-201ENSMUST00000019192 1176 ntTSL 1 (best) BASIC10.05□□□□□ -0.8
Sssca1P56873 Ighv1-60-201ENSMUST00000195816 405 ntBASIC10.05□□□□□ -0.8
Sssca1P56873 Gm38671-201ENSMUST00000200573 130 ntBASIC10.05□□□□□ -0.8
Sssca1P56873 AC134254.1-201ENSMUST00000221362 167 ntBASIC10.05□□□□□ -0.8
Sssca1P56873 Dpm3-201ENSMUST00000040824 404 ntAPPRIS P1 TSL 1 (best) BASIC10.05□□□□□ -0.8
Sssca1P56873 Hilpda-201ENSMUST00000054445 982 ntAPPRIS P1 TSL 1 (best) BASIC10.05□□□□□ -0.8
Sssca1P56873 Uqcr10-201ENSMUST00000058407 434 ntAPPRIS P1 TSL 1 (best) BASIC10.05□□□□□ -0.8
Sssca1P56873 Shtn1-201ENSMUST00000047511 4081 ntAPPRIS P4 TSL 1 (best) BASIC10.05□□□□□ -0.8
Sssca1P56873 Tmcc3-204ENSMUST00000121471 2614 ntTSL 1 (best) BASIC10.05□□□□□ -0.8
Sssca1P56873 Egr2-202ENSMUST00000105438 2864 ntAPPRIS ALT2 TSL 1 (best) BASIC10.05□□□□□ -0.8
Sssca1P56873 Tas1r1-201ENSMUST00000030792 2863 ntAPPRIS P1 TSL 1 (best) BASIC10.05□□□□□ -0.8
Sssca1P56873 Chd5-201ENSMUST00000005175 9122 ntAPPRIS ALT2 TSL 5 BASIC10.05□□□□□ -0.8
Sssca1P56873 Clec4g-201ENSMUST00000058040 1441 ntTSL 5 BASIC10.05□□□□□ -0.8
Sssca1P56873 Igf1-203ENSMUST00000105300 1673 ntTSL 1 (best) BASIC10.05□□□□□ -0.8
Sssca1P56873 Adi1-201ENSMUST00000020957 1652 ntAPPRIS P1 TSL 1 (best) BASIC10.05□□□□□ -0.8
Sssca1P56873 Rps6ka6-202ENSMUST00000082034 4170 ntAPPRIS P2 TSL 5 BASIC10.05□□□□□ -0.8
Sssca1P56873 Lig1-201ENSMUST00000098814 3091 ntAPPRIS P1 TSL 5 BASIC10.05□□□□□ -0.8
Sssca1P56873 Lrp1-202ENSMUST00000118455 2097 ntTSL 5 BASIC10.05□□□□□ -0.8
Sssca1P56873 Pmp22-204ENSMUST00000108702 1822 ntAPPRIS P1 TSL 3 BASIC10.05□□□□□ -0.8
Sssca1P56873 Gprc5c-208ENSMUST00000177952 1809 ntAPPRIS P3 TSL 1 (best) BASIC10.05□□□□□ -0.8
Sssca1P56873 Gm38569-201ENSMUST00000205476 2228 ntTSL 1 (best) BASIC10.05□□□□□ -0.8
Sssca1P56873 C530043K16Rik-201ENSMUST00000201865 3109 ntBASIC10.05□□□□□ -0.8
Sssca1P56873 Rfx7-203ENSMUST00000183372 1457 ntTSL 1 (best) BASIC10.04□□□□□ -0.8
Sssca1P56873 Lysmd1-201ENSMUST00000066386 2394 ntAPPRIS P1 TSL 1 (best) BASIC10.04□□□□□ -0.8
Sssca1P56873 Plekhg6-201ENSMUST00000042647 3299 ntAPPRIS P1 TSL 1 (best) BASIC10.04□□□□□ -0.8
Retrieved 100 of 76,532 protein–RNA pairs in 43.5 ms