Protein–RNA interactions for Protein: P53783

Sox1, Transcription factor SOX-1, mousemouse

Predictions only

Length 391 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox1P53783 Fam169b-202ENSMUST00000125685 2821 ntAPPRIS P2 TSL 1 (best) BASIC12.72□□□□□ -0.37
Sox1P53783 Nynrin-202ENSMUST00000168479 7511 ntAPPRIS P1 TSL 5 BASIC12.72□□□□□ -0.37
Sox1P53783 Fbn1-201ENSMUST00000028633 9847 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Sox1P53783 Gm12503-201ENSMUST00000146576 3127 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Sox1P53783 Scin-202ENSMUST00000078481 2654 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Sox1P53783 Stx5a-201ENSMUST00000010254 1780 ntAPPRIS ALT2 TSL 5 BASIC12.72□□□□□ -0.37
Sox1P53783 Adamts7-208ENSMUST00000167122 5338 ntAPPRIS ALT2 TSL 5 BASIC12.72□□□□□ -0.37
Sox1P53783 n-R5s64-201ENSMUST00000102019 119 ntBASIC12.72□□□□□ -0.37
Sox1P53783 Gm24791-201ENSMUST00000104284 131 ntBASIC12.72□□□□□ -0.37
Sox1P53783 Gm13523-201ENSMUST00000151820 488 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Sox1P53783 Gm17116-201ENSMUST00000169175 1013 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Sox1P53783 Ctdspl-202ENSMUST00000172464 798 ntAPPRIS ALT1 TSL 5 BASIC12.72□□□□□ -0.37
Sox1P53783 Rpl41-203ENSMUST00000176683 437 ntAPPRIS P2 TSL 2 BASIC12.72□□□□□ -0.37
Sox1P53783 A630035G10Rik-202ENSMUST00000194468 1065 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Sox1P53783 Gm35960-201ENSMUST00000202712 767 ntBASIC12.72□□□□□ -0.37
Sox1P53783 Gm45410-201ENSMUST00000211331 1093 ntBASIC12.72□□□□□ -0.37
Sox1P53783 Olfr1347-205ENSMUST00000220413 964 ntBASIC12.72□□□□□ -0.37
Sox1P53783 AC151275.1-201ENSMUST00000224870 585 ntBASIC12.72□□□□□ -0.37
Sox1P53783 Odf3-201ENSMUST00000026555 1128 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Sox1P53783 Olfr1347-201ENSMUST00000036357 964 ntAPPRIS P1 BASIC12.72□□□□□ -0.37
Sox1P53783 Ano7-201ENSMUST00000058682 2963 ntAPPRIS ALT2 TSL 1 (best) BASIC12.72□□□□□ -0.37
Sox1P53783 Aatk-201ENSMUST00000064307 5336 ntAPPRIS ALT2 TSL 1 (best) BASIC12.72□□□□□ -0.37
Sox1P53783 Awat2-201ENSMUST00000033567 1619 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Sox1P53783 Gm12623-201ENSMUST00000119849 1983 ntBASIC12.72□□□□□ -0.37
Sox1P53783 Zc3h7b-201ENSMUST00000109554 5958 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Sox1P53783 A930033H14Rik-201ENSMUST00000170048 2969 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Sox1P53783 Zfp236-201ENSMUST00000171071 9626 ntAPPRIS P2 TSL 1 (best) BASIC12.72□□□□□ -0.37
Sox1P53783 Gbe1-207ENSMUST00000171132 3303 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Sox1P53783 Cecr2-202ENSMUST00000112686 9212 ntAPPRIS P2 TSL 5 BASIC12.72□□□□□ -0.37
Sox1P53783 Gm5641-201ENSMUST00000091130 1488 ntBASIC12.72□□□□□ -0.37
Sox1P53783 Kif1c-204ENSMUST00000137119 6596 ntAPPRIS P2 TSL 5 BASIC12.72□□□□□ -0.37
Sox1P53783 Mdfic-203ENSMUST00000125326 3635 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
Sox1P53783 Mcoln2-201ENSMUST00000011152 2520 ntAPPRIS P4 TSL 1 (best) BASIC12.71□□□□□ -0.37
Sox1P53783 Zmym3-205ENSMUST00000119699 1750 ntTSL 5 BASIC12.71□□□□□ -0.37
Sox1P53783 Amz2-202ENSMUST00000092500 2816 ntAPPRIS P2 TSL 1 (best) BASIC12.71□□□□□ -0.37
Sox1P53783 Iffo2-201ENSMUST00000040023 5227 ntAPPRIS P3 TSL 5 BASIC12.71□□□□□ -0.37
Sox1P53783 Prkaca-202ENSMUST00000211558 1399 ntTSL 5 BASIC12.71□□□□□ -0.37
Sox1P53783 Cage1-202ENSMUST00000089840 3449 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
Sox1P53783 Peli3-202ENSMUST00000120475 2988 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
Sox1P53783 Kcnj3-201ENSMUST00000067101 5215 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Sox1P53783 Gm37240-203ENSMUST00000154148 2913 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Sox1P53783 Iws1-206ENSMUST00000212675 2936 ntAPPRIS ALT2 TSL 5 BASIC12.71□□□□□ -0.37
Sox1P53783 Ecm1-202ENSMUST00000117507 1900 ntAPPRIS P3 TSL 1 (best) BASIC12.71□□□□□ -0.37
Sox1P53783 Mrpl55-202ENSMUST00000108784 729 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
Sox1P53783 Isg20-203ENSMUST00000120331 845 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Sox1P53783 Gm7722-201ENSMUST00000120646 741 ntBASIC12.71□□□□□ -0.37
Sox1P53783 Gm12291-201ENSMUST00000121627 311 ntBASIC12.71□□□□□ -0.37
Sox1P53783 Apobr-203ENSMUST00000137646 457 ntAPPRIS ALT2 TSL 2 BASIC12.71□□□□□ -0.37
Sox1P53783 Gm16876-201ENSMUST00000151945 760 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
Sox1P53783 Gm24398-201ENSMUST00000157870 109 ntBASIC12.71□□□□□ -0.37
Sox1P53783 Hmgn3-201ENSMUST00000161796 862 ntAPPRIS ALT1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Sox1P53783 Fxyd5-209ENSMUST00000162087 762 ntAPPRIS P3 TSL 3 BASIC12.71□□□□□ -0.37
Sox1P53783 9330159M07Rik-202ENSMUST00000180783 1044 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
Sox1P53783 Mir6407-201ENSMUST00000184510 101 ntBASIC12.71□□□□□ -0.37
Sox1P53783 Gm37458-201ENSMUST00000194055 410 ntBASIC12.71□□□□□ -0.37
Sox1P53783 Gm31048-201ENSMUST00000196103 1061 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
Sox1P53783 Gm43854-201ENSMUST00000200418 394 ntBASIC12.71□□□□□ -0.37
Sox1P53783 Gm35549-201ENSMUST00000203176 735 ntAPPRIS P1 TSL 5 BASIC12.71□□□□□ -0.37
Sox1P53783 Chn2-212ENSMUST00000204115 783 ntTSL 5 BASIC12.71□□□□□ -0.37
Sox1P53783 Gm32390-201ENSMUST00000212713 1172 ntBASIC12.71□□□□□ -0.37
Sox1P53783 AC153954.1-201ENSMUST00000216959 255 ntBASIC12.71□□□□□ -0.37
Sox1P53783 Olfr692-202ENSMUST00000217827 1126 ntBASIC12.71□□□□□ -0.37
Sox1P53783 AC131743.2-201ENSMUST00000221031 968 ntTSL 5 BASIC12.71□□□□□ -0.37
Sox1P53783 AC166344.1-201ENSMUST00000223745 674 ntBASIC12.71□□□□□ -0.37
Sox1P53783 AC154257.1-202ENSMUST00000224729 843 ntBASIC12.71□□□□□ -0.37
Sox1P53783 AC154361.2-201ENSMUST00000224747 943 ntBASIC12.71□□□□□ -0.37
Sox1P53783 Cxcl1-201ENSMUST00000031327 953 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Sox1P53783 Mir339-201ENSMUST00000083659 96 ntBASIC12.71□□□□□ -0.37
Sox1P53783 Olfr692-201ENSMUST00000098152 1126 ntAPPRIS P1 BASIC12.71□□□□□ -0.37
Sox1P53783 Samd13-202ENSMUST00000125965 1590 ntAPPRIS P1 TSL 5 BASIC12.71□□□□□ -0.37
Sox1P53783 Gm9072-201ENSMUST00000218390 1514 ntBASIC12.71□□□□□ -0.38
Sox1P53783 Mapk1ip1-201ENSMUST00000075667 1502 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
Sox1P53783 Lzts1-201ENSMUST00000037049 1800 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
Sox1P53783 Cpeb3-204ENSMUST00000126188 4224 ntAPPRIS ALT2 TSL 1 (best) BASIC12.71□□□□□ -0.38
Sox1P53783 Sh3bp5-201ENSMUST00000091903 2684 ntAPPRIS P3 TSL 1 (best) BASIC12.71□□□□□ -0.38
Sox1P53783 Aff4-201ENSMUST00000060945 10099 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
Sox1P53783 Ntpcr-202ENSMUST00000065135 1497 ntTSL 1 (best) BASIC12.71□□□□□ -0.38
Sox1P53783 Lhx1-201ENSMUST00000018842 3846 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
Sox1P53783 Wapl-205ENSMUST00000169910 4066 ntAPPRIS P3 TSL 1 (best) BASIC12.71□□□□□ -0.38
Sox1P53783 Phka2-202ENSMUST00000112376 2310 ntTSL 1 (best) BASIC12.71□□□□□ -0.38
Sox1P53783 Gm2895-201ENSMUST00000171591 3194 ntTSL 1 (best) BASIC12.71□□□□□ -0.38
Sox1P53783 Atf7-202ENSMUST00000108828 2887 ntTSL 1 (best) BASIC12.71□□□□□ -0.38
Sox1P53783 Gm44056-201ENSMUST00000204623 1427 ntBASIC12.71□□□□□ -0.38
Sox1P53783 Slc6a21-206ENSMUST00000210861 2838 ntAPPRIS P1 TSL 5 BASIC12.7□□□□□ -0.38
Sox1P53783 Ctsl-201ENSMUST00000021933 1971 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Sox1P53783 Nr2f2-201ENSMUST00000032768 4222 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Sox1P53783 Hdac7-202ENSMUST00000088402 4223 ntAPPRIS P3 TSL 1 (best) BASIC12.7□□□□□ -0.38
Sox1P53783 Acot6-202ENSMUST00000222921 3622 ntBASIC12.7□□□□□ -0.38
Sox1P53783 Irf7-203ENSMUST00000106023 2237 ntAPPRIS ALT2 TSL 1 (best) BASIC12.7□□□□□ -0.38
Sox1P53783 Slc25a21-205ENSMUST00000217690 1388 ntAPPRIS ALT2 TSL 1 (best) BASIC12.7□□□□□ -0.38
Sox1P53783 Sec13-201ENSMUST00000032440 1353 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Sox1P53783 1300017J02Rik-202ENSMUST00000123530 1874 ntTSL 5 BASIC12.7□□□□□ -0.38
Sox1P53783 Dysf-201ENSMUST00000081904 6660 ntAPPRIS P4 TSL 1 (best) BASIC12.7□□□□□ -0.38
Sox1P53783 Slc5a6-202ENSMUST00000114668 3436 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Sox1P53783 Nfatc2-204ENSMUST00000109184 6828 ntAPPRIS ALT2 TSL 1 (best) BASIC12.7□□□□□ -0.38
Sox1P53783 Dusp14-201ENSMUST00000018792 1571 ntAPPRIS P1 TSL 2 BASIC12.7□□□□□ -0.38
Sox1P53783 Erc1-207ENSMUST00000183911 3865 ntTSL 5 BASIC12.7□□□□□ -0.38
Sox1P53783 Gm25076-201ENSMUST00000104098 132 ntBASIC12.7□□□□□ -0.38
Sox1P53783 Smim8-204ENSMUST00000108133 935 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Sox1P53783 Gm9166-201ENSMUST00000120293 561 ntBASIC12.7□□□□□ -0.38
Retrieved 100 of 76,532 protein–RNA pairs in 56.2 ms