Protein–RNA interactions for Protein: P43680

Sox18, Transcription factor SOX-18, mousemouse

Predictions only

Length 377 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox18P43680 C730045M19Rik-201ENSMUST00000201944 1315 ntBASIC12.11□□□□□ -0.47
Sox18P43680 Rcan1-201ENSMUST00000023672 2192 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Sox18P43680 Wdr36-202ENSMUST00000166214 2942 ntAPPRIS ALT2 TSL 1 (best) BASIC12.1□□□□□ -0.47
Sox18P43680 Got1-201ENSMUST00000026196 2058 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Sox18P43680 Sema6c-203ENSMUST00000107217 3595 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Sox18P43680 Sh3bp4-201ENSMUST00000066279 4995 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Sox18P43680 Fhl4-202ENSMUST00000216889 1860 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Sox18P43680 Ggt7-201ENSMUST00000029131 2614 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Sox18P43680 Fam57b-202ENSMUST00000098032 1894 ntTSL 5 BASIC12.1□□□□□ -0.47
Sox18P43680 Olfr279-202ENSMUST00000205772 5330 ntAPPRIS P1 TSL 3 BASIC12.1□□□□□ -0.47
Sox18P43680 Mpi-201ENSMUST00000034856 1780 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Sox18P43680 Sema3b-205ENSMUST00000102532 3191 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Sox18P43680 Ext1-201ENSMUST00000077273 7663 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Sox18P43680 Smarca4-204ENSMUST00000174008 5405 ntAPPRIS ALT1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Sox18P43680 AC091458.1-201ENSMUST00000220902 1361 ntBASIC12.1□□□□□ -0.47
Sox18P43680 Gm12380-201ENSMUST00000119012 544 ntBASIC12.1□□□□□ -0.47
Sox18P43680 Sec11a-204ENSMUST00000120285 875 ntTSL 3 BASIC12.1□□□□□ -0.47
Sox18P43680 Gm13658-201ENSMUST00000135329 929 ntTSL 5 BASIC12.1□□□□□ -0.47
Sox18P43680 9430021M05Rik-201ENSMUST00000145985 1201 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Sox18P43680 Gm29615-201ENSMUST00000185371 697 ntBASIC12.1□□□□□ -0.47
Sox18P43680 Gm28224-201ENSMUST00000186078 697 ntBASIC12.1□□□□□ -0.47
Sox18P43680 Gm29001-201ENSMUST00000186177 697 ntBASIC12.1□□□□□ -0.47
Sox18P43680 Gm28292-201ENSMUST00000186593 697 ntBASIC12.1□□□□□ -0.47
Sox18P43680 Gm28101-201ENSMUST00000187608 697 ntBASIC12.1□□□□□ -0.47
Sox18P43680 Gm29076-201ENSMUST00000187689 697 ntBASIC12.1□□□□□ -0.47
Sox18P43680 Gm28302-201ENSMUST00000187931 697 ntBASIC12.1□□□□□ -0.47
Sox18P43680 Gm28646-201ENSMUST00000188220 697 ntBASIC12.1□□□□□ -0.47
Sox18P43680 Gm28205-201ENSMUST00000189177 697 ntBASIC12.1□□□□□ -0.47
Sox18P43680 Gm29032-201ENSMUST00000189797 697 ntBASIC12.1□□□□□ -0.47
Sox18P43680 Gm28411-201ENSMUST00000189864 341 ntTSL 3 BASIC12.1□□□□□ -0.47
Sox18P43680 Gm28695-201ENSMUST00000190300 697 ntBASIC12.1□□□□□ -0.47
Sox18P43680 Gm37448-201ENSMUST00000192795 697 ntBASIC12.1□□□□□ -0.47
Sox18P43680 Gm38092-201ENSMUST00000195600 653 ntBASIC12.1□□□□□ -0.47
Sox18P43680 4930447N08Rik-203ENSMUST00000198879 1157 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Sox18P43680 3830422I06Rik-201ENSMUST00000200199 1181 ntBASIC12.1□□□□□ -0.47
Sox18P43680 Gm45550-201ENSMUST00000209380 946 ntBASIC12.1□□□□□ -0.47
Sox18P43680 Gm13522-202ENSMUST00000209682 997 ntTSL 5 BASIC12.1□□□□□ -0.47
Sox18P43680 Gm45598-202ENSMUST00000210719 986 ntBASIC12.1□□□□□ -0.47
Sox18P43680 Olfr907-202ENSMUST00000214003 1235 ntAPPRIS P1 TSL 3 BASIC12.1□□□□□ -0.47
Sox18P43680 AC166344.1-202ENSMUST00000224139 234 ntBASIC12.1□□□□□ -0.47
Sox18P43680 Nudt2-201ENSMUST00000030154 845 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Sox18P43680 1700128F08Rik-201ENSMUST00000034483 1110 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Sox18P43680 Olfr907-201ENSMUST00000052901 933 ntAPPRIS P1 BASIC12.1□□□□□ -0.47
Sox18P43680 2310057N15Rik-201ENSMUST00000054223 1028 ntAPPRIS P1 BASIC12.1□□□□□ -0.47
Sox18P43680 Olfr938-201ENSMUST00000056499 1190 ntAPPRIS P1 BASIC12.1□□□□□ -0.47
Sox18P43680 Ssxb3-201ENSMUST00000089374 824 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Sox18P43680 Mpped1-203ENSMUST00000109470 3281 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Sox18P43680 Ints13-201ENSMUST00000032427 3059 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Sox18P43680 4930429D17Rik-201ENSMUST00000198193 1624 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Sox18P43680 Specc1-209ENSMUST00000201671 2523 ntTSL 5 BASIC12.1□□□□□ -0.47
Sox18P43680 Grk6-205ENSMUST00000224653 2976 ntBASIC12.1□□□□□ -0.47
Sox18P43680 Bcl2l1-201ENSMUST00000007803 2417 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Sox18P43680 AC154725.1-201ENSMUST00000224826 1961 ntBASIC12.1□□□□□ -0.47
Sox18P43680 Cyp4x1-201ENSMUST00000051400 1524 ntAPPRIS P2 TSL 1 (best) BASIC12.1□□□□□ -0.47
Sox18P43680 Nphp4-201ENSMUST00000056567 4583 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Sox18P43680 Ndufaf7-201ENSMUST00000024887 2303 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Sox18P43680 Spock1-205ENSMUST00000187852 3113 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Sox18P43680 Pcyox1-201ENSMUST00000032065 4295 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Sox18P43680 Lmod3-201ENSMUST00000095655 2215 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Sox18P43680 Pdlim5-204ENSMUST00000168967 1755 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Sox18P43680 Fam83e-201ENSMUST00000129507 2908 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Sox18P43680 A430018G15Rik-201ENSMUST00000124210 1314 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Sox18P43680 Gm5799-201ENSMUST00000169023 1314 ntAPPRIS P1 TSL 5 BASIC12.1□□□□□ -0.47
Sox18P43680 AC163296.2-201ENSMUST00000220177 1315 ntBASIC12.1□□□□□ -0.47
Sox18P43680 Fbxl12-207ENSMUST00000151861 1668 ntTSL 2 BASIC12.1□□□□□ -0.47
Sox18P43680 2700080J24Rik-201ENSMUST00000205314 1662 ntBASIC12.1□□□□□ -0.47
Sox18P43680 Lca5-202ENSMUST00000034793 2001 ntAPPRIS ALT2 TSL 1 (best) BASIC12.1□□□□□ -0.47
Sox18P43680 Tcirg1-211ENSMUST00000145791 2729 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Sox18P43680 Edrf1-202ENSMUST00000128901 4380 ntAPPRIS ALT2 TSL 5 BASIC12.09□□□□□ -0.47
Sox18P43680 Rarg-201ENSMUST00000043172 2953 ntAPPRIS P3 TSL 1 (best) BASIC12.09□□□□□ -0.47
Sox18P43680 Zer1-202ENSMUST00000113677 4189 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Sox18P43680 Mdga2-201ENSMUST00000037181 9833 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Sox18P43680 Trim50-202ENSMUST00000111180 1456 ntAPPRIS ALT2 TSL 1 (best) BASIC12.09□□□□□ -0.47
Sox18P43680 Selenbp1-201ENSMUST00000090839 1712 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Sox18P43680 Selenbp2-201ENSMUST00000090848 1719 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Sox18P43680 Dcaf6-201ENSMUST00000027856 4110 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Sox18P43680 Ctgf-203ENSMUST00000176228 2490 ntTSL 2 BASIC12.09□□□□□ -0.47
Sox18P43680 Pax5-204ENSMUST00000107826 1228 ntTSL 5 BASIC12.09□□□□□ -0.47
Sox18P43680 Gm12015-201ENSMUST00000117065 843 ntBASIC12.09□□□□□ -0.47
Sox18P43680 Gm13736-201ENSMUST00000119272 253 ntBASIC12.09□□□□□ -0.47
Sox18P43680 Cabp2-202ENSMUST00000159556 781 ntAPPRIS ALT2 TSL 1 (best) BASIC12.09□□□□□ -0.47
Sox18P43680 Gm37215-201ENSMUST00000194927 1259 ntBASIC12.09□□□□□ -0.47
Sox18P43680 Gm38297-201ENSMUST00000195122 1057 ntBASIC12.09□□□□□ -0.47
Sox18P43680 Gm43124-201ENSMUST00000201878 278 ntBASIC12.09□□□□□ -0.47
Sox18P43680 AC153522.1-201ENSMUST00000220047 1090 ntBASIC12.09□□□□□ -0.47
Sox18P43680 Tnfrsf19-203ENSMUST00000224371 1239 ntAPPRIS ALT2 BASIC12.09□□□□□ -0.47
Sox18P43680 Pebp4-201ENSMUST00000022678 1079 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Sox18P43680 Paox-201ENSMUST00000026537 4655 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Sox18P43680 Acrbp-201ENSMUST00000032481 584 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Sox18P43680 Olfr1275-201ENSMUST00000099620 1020 ntAPPRIS P1 BASIC12.09□□□□□ -0.47
Sox18P43680 Elmo3-202ENSMUST00000212033 2351 ntTSL 5 BASIC12.09□□□□□ -0.47
Sox18P43680 Fmo1-202ENSMUST00000111518 1506 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Sox18P43680 Dusp26-203ENSMUST00000161713 1524 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Sox18P43680 Speg-205ENSMUST00000113590 3393 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Sox18P43680 Erg-206ENSMUST00000122199 2007 ntAPPRIS ALT1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Sox18P43680 Lypd6-201ENSMUST00000053208 3620 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Sox18P43680 Rab17-201ENSMUST00000027529 1831 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Sox18P43680 Rnf214-201ENSMUST00000058720 3964 ntAPPRIS P3 TSL 1 (best) BASIC12.09□□□□□ -0.47
Sox18P43680 Cpxm2-201ENSMUST00000033149 3498 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Sox18P43680 CT009713.10-201ENSMUST00000225013 1986 ntBASIC12.09□□□□□ -0.47
Retrieved 100 of 76,532 protein–RNA pairs in 35 ms