Protein–RNA interactions for Protein: P40645

Sox6, Transcription factor SOX-6, mousemouse

Predictions only

Length 827 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox6P40645 Nox3-201ENSMUST00000115800 1792 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Sox6P40645 Cyth3-202ENSMUST00000116456 3738 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Sox6P40645 Kxd1-204ENSMUST00000121623 884 ntAPPRIS P1 TSL 5 BASIC11.73□□□□□ -0.53
Sox6P40645 Pla2g10os-201ENSMUST00000141172 174 ntTSL 5 BASIC11.73□□□□□ -0.53
Sox6P40645 1500009C09Rik-202ENSMUST00000143238 1552 ntAPPRIS ALT2 TSL 1 (best) BASIC11.73□□□□□ -0.53
Sox6P40645 Lgals12-203ENSMUST00000159983 2470 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Sox6P40645 Rhobtb1-205ENSMUST00000164034 2421 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Sox6P40645 Dpy30-202ENSMUST00000164832 799 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Sox6P40645 Lig1-210ENSMUST00000165964 3166 ntAPPRIS P1 TSL 5 BASIC11.73□□□□□ -0.53
Sox6P40645 Gm29649-201ENSMUST00000185649 419 ntBASIC11.73□□□□□ -0.53
Sox6P40645 Gm37922-201ENSMUST00000195596 455 ntBASIC11.73□□□□□ -0.53
Sox6P40645 Gm38049-201ENSMUST00000195698 1372 ntBASIC11.73□□□□□ -0.53
Sox6P40645 Gm18187-201ENSMUST00000196476 984 ntBASIC11.73□□□□□ -0.53
Sox6P40645 Ccdc170-201ENSMUST00000019901 2151 ntAPPRIS P2 TSL 5 BASIC11.73□□□□□ -0.53
Sox6P40645 Gm42906-201ENSMUST00000202365 408 ntAPPRIS P1 TSL 5 BASIC11.73□□□□□ -0.53
Sox6P40645 Gm20219-201ENSMUST00000209718 1269 ntAPPRIS P1 TSL 5 BASIC11.73□□□□□ -0.53
Sox6P40645 AC154262.2-202ENSMUST00000225158 1331 ntBASIC11.73□□□□□ -0.53
Sox6P40645 Dmac1-201ENSMUST00000030103 741 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Sox6P40645 Cpn2-201ENSMUST00000064856 4583 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Sox6P40645 Capg-201ENSMUST00000071044 1247 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Sox6P40645 Grk4-202ENSMUST00000074651 3234 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
Sox6P40645 Kxd1-201ENSMUST00000093456 1216 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
Sox6P40645 Hmbs-202ENSMUST00000097558 1534 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
Sox6P40645 Gatad2a-201ENSMUST00000065169 3812 ntAPPRIS P3 TSL 1 (best) BASIC11.73□□□□□ -0.53
Sox6P40645 Tsga10-202ENSMUST00000088072 3837 ntAPPRIS ALT2 TSL 1 (best) BASIC11.73□□□□□ -0.53
Sox6P40645 Evi5l-208ENSMUST00000176825 3728 ntAPPRIS ALT2 TSL 5 BASIC11.73□□□□□ -0.53
Sox6P40645 Ppargc1b-202ENSMUST00000075299 3656 ntAPPRIS P2 TSL 1 (best) BASIC11.73□□□□□ -0.53
Sox6P40645 Ppp1r9b-202ENSMUST00000107748 3095 ntAPPRIS ALT2 TSL 1 (best) BASIC11.73□□□□□ -0.53
Sox6P40645 Zbtb49-201ENSMUST00000094833 2978 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Sox6P40645 Gm28036-202ENSMUST00000132494 5505 ntAPPRIS P5 TSL 2 BASIC11.73□□□□□ -0.53
Sox6P40645 Kalrn-210ENSMUST00000114964 2693 ntTSL 5 BASIC11.73□□□□□ -0.53
Sox6P40645 Adgrl3-214ENSMUST00000120445 5230 ntTSL 5 BASIC11.73□□□□□ -0.53
Sox6P40645 Cdh7-202ENSMUST00000112701 4945 ntAPPRIS P1 TSL 5 BASIC11.72□□□□□ -0.53
Sox6P40645 Prr36-201ENSMUST00000168386 4616 ntAPPRIS P1 TSL 5 BASIC11.72□□□□□ -0.53
Sox6P40645 Tmem115-201ENSMUST00000010189 2194 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Sox6P40645 Pde4d-201ENSMUST00000074103 2167 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
Sox6P40645 Rapgef6-202ENSMUST00000101206 5864 ntAPPRIS ALT2 TSL 5 BASIC11.72□□□□□ -0.53
Sox6P40645 Spata7-203ENSMUST00000101146 1913 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
Sox6P40645 Fnbp1-206ENSMUST00000113555 1776 ntTSL 5 BASIC11.72□□□□□ -0.53
Sox6P40645 Mlx-203ENSMUST00000107303 1736 ntAPPRIS ALT1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Sox6P40645 Tmod2-201ENSMUST00000064433 9884 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Sox6P40645 Cd72-201ENSMUST00000030179 1505 ntAPPRIS ALT2 TSL 1 (best) BASIC11.72□□□□□ -0.53
Sox6P40645 Gm26703-201ENSMUST00000181370 2864 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
Sox6P40645 D830024N08Rik-201ENSMUST00000212132 2899 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
Sox6P40645 Ccdc167-202ENSMUST00000128751 1365 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Sox6P40645 Ninj1-202ENSMUST00000120733 1321 ntTSL 5 BASIC11.72□□□□□ -0.53
Sox6P40645 Umod-206ENSMUST00000209095 2571 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Sox6P40645 Mapkapk5-205ENSMUST00000111786 975 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
Sox6P40645 Dctn6-202ENSMUST00000117243 962 ntTSL 3 BASIC11.72□□□□□ -0.53
Sox6P40645 Car15-201ENSMUST00000118960 1283 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Sox6P40645 Gm15824-201ENSMUST00000119516 955 ntBASIC11.72□□□□□ -0.53
Sox6P40645 Mthfsd-206ENSMUST00000133037 1060 ntTSL 5 BASIC11.72□□□□□ -0.53
Sox6P40645 Gm10863-204ENSMUST00000147620 776 ntTSL 3 BASIC11.72□□□□□ -0.53
Sox6P40645 Gm24644-201ENSMUST00000157114 139 ntBASIC11.72□□□□□ -0.53
Sox6P40645 Gm22331-201ENSMUST00000158066 136 ntBASIC11.72□□□□□ -0.53
Sox6P40645 Gm15494-202ENSMUST00000171665 451 ntTSL 2 BASIC11.72□□□□□ -0.53
Sox6P40645 Rps19-ps13-201ENSMUST00000180504 441 ntBASIC11.72□□□□□ -0.53
Sox6P40645 Asb1-206ENSMUST00000188879 1299 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
Sox6P40645 Gm44124-201ENSMUST00000204159 472 ntBASIC11.72□□□□□ -0.53
Sox6P40645 AC156504.2-201ENSMUST00000213800 711 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
Sox6P40645 AC165254.1-201ENSMUST00000220736 599 ntTSL 5 BASIC11.72□□□□□ -0.53
Sox6P40645 4930518P08Rik-201ENSMUST00000221281 1187 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
Sox6P40645 AC138604.1-201ENSMUST00000226969 739 ntBASIC11.72□□□□□ -0.53
Sox6P40645 Pemt-201ENSMUST00000000310 953 ntAPPRIS P1 TSL 3 BASIC11.72□□□□□ -0.53
Sox6P40645 Gm10244-201ENSMUST00000090237 830 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
Sox6P40645 Gja5-203ENSMUST00000199597 3668 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
Sox6P40645 Ascc2-202ENSMUST00000109930 4844 ntAPPRIS ALT2 TSL 1 (best) BASIC11.72□□□□□ -0.53
Sox6P40645 Chl1-204ENSMUST00000203912 4628 ntAPPRIS ALT2 TSL 1 (best) BASIC11.72□□□□□ -0.53
Sox6P40645 Zfp536-202ENSMUST00000175941 4423 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Sox6P40645 Fry-201ENSMUST00000087204 10893 ntAPPRIS P1 TSL 5 BASIC11.72□□□□□ -0.53
Sox6P40645 Pou4f2-201ENSMUST00000034115 3204 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Sox6P40645 Ttc34-201ENSMUST00000050220 3200 ntAPPRIS P2 TSL 1 (best) BASIC11.72□□□□□ -0.53
Sox6P40645 Cyth1-204ENSMUST00000106305 3179 ntAPPRIS ALT1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Sox6P40645 Mfsd9-201ENSMUST00000039672 3160 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Sox6P40645 Rad23a-201ENSMUST00000003911 2074 ntAPPRIS P3 TSL 1 (best) BASIC11.72□□□□□ -0.53
Sox6P40645 Kcnma1-205ENSMUST00000145596 12094 ntAPPRIS ALT2 BASIC11.72□□□□□ -0.53
Sox6P40645 Ctsl-201ENSMUST00000021933 1971 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Sox6P40645 Cald1-205ENSMUST00000115027 4777 ntTSL 5 BASIC11.72□□□□□ -0.53
Sox6P40645 Asph-207ENSMUST00000108333 2652 ntTSL 5 BASIC11.72□□□□□ -0.53
Sox6P40645 Ccdc114-201ENSMUST00000038720 2460 ntAPPRIS P2 TSL 1 (best) BASIC11.71□□□□□ -0.53
Sox6P40645 Pcdhga4-201ENSMUST00000194418 4727 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Sox6P40645 Duoxa1-202ENSMUST00000110537 1506 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Sox6P40645 Adora1-203ENSMUST00000169927 4581 ntAPPRIS P1 TSL 5 BASIC11.71□□□□□ -0.53
Sox6P40645 1700001L05Rik-201ENSMUST00000100370 2270 ntTSL 1 (best) BASIC11.71□□□□□ -0.53
Sox6P40645 Lnx1-209ENSMUST00000153543 2208 ntTSL 5 BASIC11.71□□□□□ -0.53
Sox6P40645 Dgcr8-201ENSMUST00000009321 4320 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Sox6P40645 Trim26-202ENSMUST00000123715 1406 ntTSL 5 BASIC11.71□□□□□ -0.53
Sox6P40645 Irf1-203ENSMUST00000108922 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC11.71□□□□□ -0.53
Sox6P40645 BC039966-201ENSMUST00000141582 1371 ntTSL 1 (best) BASIC11.71□□□□□ -0.53
Sox6P40645 Prkcd-202ENSMUST00000112202 2005 ntTSL 1 (best) BASIC11.71□□□□□ -0.53
Sox6P40645 Prkag3-202ENSMUST00000113672 2003 ntTSL 1 (best) BASIC11.71□□□□□ -0.53
Sox6P40645 Ctbp2-209ENSMUST00000166439 1997 ntTSL 1 (best) BASIC11.71□□□□□ -0.53
Sox6P40645 Tsku-202ENSMUST00000164726 2620 ntAPPRIS P1 TSL 2 BASIC11.71□□□□□ -0.53
Sox6P40645 Mad2l2-203ENSMUST00000105707 949 ntTSL 3 BASIC11.71□□□□□ -0.53
Sox6P40645 Ggt6-203ENSMUST00000108499 874 ntTSL 1 (best) BASIC11.71□□□□□ -0.53
Sox6P40645 Arpc3-203ENSMUST00000111713 708 ntTSL 3 BASIC11.71□□□□□ -0.53
Sox6P40645 Etfrf1-206ENSMUST00000111725 872 ntAPPRIS P1 TSL 2 BASIC11.71□□□□□ -0.53
Sox6P40645 Alkbh2-202ENSMUST00000112279 899 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Sox6P40645 Gm12203-201ENSMUST00000118235 598 ntBASIC11.71□□□□□ -0.53
Sox6P40645 Gm12209-201ENSMUST00000120089 596 ntBASIC11.71□□□□□ -0.53
Retrieved 100 of 76,532 protein–RNA pairs in 38.6 ms