Protein–RNA interactions for Protein: P29595

Nedd8, NEDD8, mousemouse

Predictions only

Length 81 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nedd8P29595 Gm19792-201ENSMUST00000222522 2021 ntTSL 5 BASIC11.48□□□□□ -0.57
Nedd8P29595 Cdk5rap1-203ENSMUST00000109731 2160 ntAPPRIS P1 TSL 5 BASIC11.48□□□□□ -0.57
Nedd8P29595 Wif1-201ENSMUST00000020439 2294 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Nedd8P29595 Lgals3bp-201ENSMUST00000043722 2330 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Nedd8P29595 Gm36957-201ENSMUST00000192982 2824 ntBASIC11.48□□□□□ -0.57
Nedd8P29595 Rasgef1b-209ENSMUST00000168092 2987 ntAPPRIS ALT1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Nedd8P29595 Rasgef1b-201ENSMUST00000031276 2990 ntAPPRIS P3 TSL 1 (best) BASIC11.48□□□□□ -0.57
Nedd8P29595 Pros1-201ENSMUST00000023629 3303 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Nedd8P29595 Mroh7-201ENSMUST00000106770 4346 ntAPPRIS P1 TSL 5 BASIC11.48□□□□□ -0.57
Nedd8P29595 Ascc2-202ENSMUST00000109930 4844 ntAPPRIS ALT2 TSL 1 (best) BASIC11.47□□□□□ -0.57
Nedd8P29595 Scml2-206ENSMUST00000112345 4847 ntAPPRIS ALT2 TSL 5 BASIC11.47□□□□□ -0.57
Nedd8P29595 Cdh20-201ENSMUST00000062528 4012 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Nedd8P29595 Slc12a9-201ENSMUST00000039991 3330 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Nedd8P29595 Tmcc1-210ENSMUST00000204353 2851 ntAPPRIS ALT2 TSL 1 (best) BASIC11.47□□□□□ -0.57
Nedd8P29595 Angpt4-201ENSMUST00000028955 2335 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Nedd8P29595 Gm44260-201ENSMUST00000204946 2094 ntBASIC11.47□□□□□ -0.57
Nedd8P29595 Cacna1s-202ENSMUST00000112068 6018 ntAPPRIS ALT2 TSL 1 (best) BASIC11.47□□□□□ -0.57
Nedd8P29595 Gabrg3-201ENSMUST00000068394 1724 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
Nedd8P29595 Gm7324-201ENSMUST00000094051 1647 ntAPPRIS P1 BASIC11.47□□□□□ -0.57
Nedd8P29595 Tbx6-202ENSMUST00000172352 1529 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
Nedd8P29595 Gm2109-201ENSMUST00000189326 1409 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
Nedd8P29595 Bmp3-203ENSMUST00000200388 6609 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
Nedd8P29595 Gm45677-201ENSMUST00000209975 1341 ntBASIC11.47□□□□□ -0.57
Nedd8P29595 Nudt1-203ENSMUST00000110825 599 ntTSL 2 BASIC11.47□□□□□ -0.57
Nedd8P29595 Ecscr-204ENSMUST00000133064 1055 ntAPPRIS ALT2 TSL 2 BASIC11.47□□□□□ -0.57
Nedd8P29595 Edn3-203ENSMUST00000140908 731 ntAPPRIS ALT2 TSL 5 BASIC11.47□□□□□ -0.57
Nedd8P29595 Rpl18a-ps1-201ENSMUST00000161190 523 ntBASIC11.47□□□□□ -0.57
Nedd8P29595 2810047C21Rik1-201ENSMUST00000172930 915 ntBASIC11.47□□□□□ -0.57
Nedd8P29595 AC132317.1-201ENSMUST00000227227 962 ntBASIC11.47□□□□□ -0.57
Nedd8P29595 Ecscr-201ENSMUST00000097618 1114 ntAPPRIS P2 TSL 1 (best) BASIC11.47□□□□□ -0.57
Nedd8P29595 Myo18b-201ENSMUST00000086617 8280 ntAPPRIS P1 TSL 5 BASIC11.47□□□□□ -0.57
Nedd8P29595 Lsamp-206ENSMUST00000187695 3411 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
Nedd8P29595 Eng-201ENSMUST00000009705 3422 ntAPPRIS P3 TSL 1 (best) BASIC11.47□□□□□ -0.57
Nedd8P29595 Kif1a-203ENSMUST00000171556 5391 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Nedd8P29595 Zfp810-201ENSMUST00000086278 3238 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Nedd8P29595 Serpine1-201ENSMUST00000041388 3011 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Nedd8P29595 Armt1-203ENSMUST00000118544 5044 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
Nedd8P29595 Racgap1-201ENSMUST00000023756 2933 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Nedd8P29595 Galr1-201ENSMUST00000065224 2871 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Nedd8P29595 Itga4-201ENSMUST00000099972 9767 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Nedd8P29595 Chd5-201ENSMUST00000005175 9122 ntAPPRIS ALT2 TSL 5 BASIC11.47□□□□□ -0.57
Nedd8P29595 Cln3-201ENSMUST00000032962 2386 ntAPPRIS P2 TSL 1 (best) BASIC11.47□□□□□ -0.57
Nedd8P29595 Ip6k3-201ENSMUST00000025046 2307 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Nedd8P29595 Frmd4a-216ENSMUST00000176828 4355 ntTSL 1 (best) BASIC11.46□□□□□ -0.57
Nedd8P29595 Syt15-202ENSMUST00000119693 1801 ntAPPRIS ALT2 TSL 1 (best) BASIC11.46□□□□□ -0.57
Nedd8P29595 Klhl22-208ENSMUST00000165790 2616 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Nedd8P29595 Jaml-201ENSMUST00000050020 2461 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Nedd8P29595 Actc1-201ENSMUST00000090269 1473 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Nedd8P29595 Mafb-201ENSMUST00000099126 3363 ntAPPRIS P1 BASIC11.46□□□□□ -0.57
Nedd8P29595 Syk-201ENSMUST00000055087 5122 ntAPPRIS P2 TSL 1 (best) BASIC11.46□□□□□ -0.57
Nedd8P29595 Bcar1-203ENSMUST00000212349 3116 ntAPPRIS ALT2 TSL 1 (best) BASIC11.46□□□□□ -0.57
Nedd8P29595 Romo1-203ENSMUST00000109598 362 ntAPPRIS P1 TSL 5 BASIC11.46□□□□□ -0.57
Nedd8P29595 Hist3h2bb-ps-201ENSMUST00000117558 465 ntBASIC11.46□□□□□ -0.57
Nedd8P29595 Gm13365-201ENSMUST00000121188 973 ntBASIC11.46□□□□□ -0.57
Nedd8P29595 Gm11978-201ENSMUST00000122315 466 ntBASIC11.46□□□□□ -0.57
Nedd8P29595 Gm12260-201ENSMUST00000122447 411 ntBASIC11.46□□□□□ -0.57
Nedd8P29595 Timm23-201ENSMUST00000013845 1173 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Nedd8P29595 Hoga1-204ENSMUST00000172244 631 ntTSL 5 BASIC11.46□□□□□ -0.57
Nedd8P29595 H2-T-ps-201ENSMUST00000172538 1067 ntBASIC11.46□□□□□ -0.57
Nedd8P29595 Gm7030-203ENSMUST00000173322 913 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Nedd8P29595 Gm17971-201ENSMUST00000190239 806 ntBASIC11.46□□□□□ -0.57
Nedd8P29595 Gm10576-201ENSMUST00000191927 825 ntBASIC11.46□□□□□ -0.57
Nedd8P29595 Gm37117-201ENSMUST00000194238 589 ntTSL 5 BASIC11.46□□□□□ -0.57
Nedd8P29595 Cxcl17-202ENSMUST00000200880 760 ntAPPRIS P2 TSL 1 (best) BASIC11.46□□□□□ -0.57
Nedd8P29595 AC135669.1-202ENSMUST00000216742 540 ntBASIC11.46□□□□□ -0.57
Nedd8P29595 AC154846.1-201ENSMUST00000226278 862 ntBASIC11.46□□□□□ -0.57
Nedd8P29595 Cela1-201ENSMUST00000023775 1103 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Nedd8P29595 Leap2-201ENSMUST00000036045 531 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Nedd8P29595 Gm7030-201ENSMUST00000046131 913 ntAPPRIS P1 TSL 5 BASIC11.46□□□□□ -0.57
Nedd8P29595 Mrpl34-201ENSMUST00000048914 607 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Nedd8P29595 Rnf138rt1-201ENSMUST00000059320 1191 ntAPPRIS P1 BASIC11.46□□□□□ -0.57
Nedd8P29595 Gm9789-201ENSMUST00000062524 397 ntAPPRIS P1 BASIC11.46□□□□□ -0.57
Nedd8P29595 Cxcl17-201ENSMUST00000074040 761 ntAPPRIS ALT2 TSL 5 BASIC11.46□□□□□ -0.57
Nedd8P29595 Ndufa3-201ENSMUST00000076657 515 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Nedd8P29595 Ccdc89-201ENSMUST00000061391 2093 ntAPPRIS P1 BASIC11.46□□□□□ -0.57
Nedd8P29595 5031434O11Rik-201ENSMUST00000180404 3731 ntTSL 1 (best) BASIC11.46□□□□□ -0.57
Nedd8P29595 BC052040-203ENSMUST00000166472 2770 ntTSL 1 (best) BASIC11.46□□□□□ -0.58
Nedd8P29595 Rbm10-207ENSMUST00000177738 2790 ntAPPRIS ALT2 TSL 5 BASIC11.46□□□□□ -0.58
Nedd8P29595 Zfp41-204ENSMUST00000161785 3540 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.58
Nedd8P29595 Zfp710-202ENSMUST00000164056 5871 ntAPPRIS P4 TSL 1 (best) BASIC11.46□□□□□ -0.58
Nedd8P29595 Zscan10-201ENSMUST00000095595 2698 ntAPPRIS P3 TSL 1 (best) BASIC11.46□□□□□ -0.58
Nedd8P29595 Eml5-201ENSMUST00000065716 9482 ntTSL 5 BASIC11.46□□□□□ -0.58
Nedd8P29595 AU019823-201ENSMUST00000131351 3316 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.58
Nedd8P29595 AU019823-205ENSMUST00000171462 3339 ntAPPRIS P1 TSL 3 BASIC11.46□□□□□ -0.58
Nedd8P29595 Knop1-206ENSMUST00000126792 3253 ntAPPRIS ALT2 TSL 1 (best) BASIC11.46□□□□□ -0.58
Nedd8P29595 Gm31518-201ENSMUST00000211925 2548 ntTSL 5 BASIC11.46□□□□□ -0.58
Nedd8P29595 Gm26510-201ENSMUST00000180468 1796 ntTSL 1 (best) BASIC11.46□□□□□ -0.58
Nedd8P29595 Abcc10-202ENSMUST00000095261 5266 ntAPPRIS P3 TSL 1 (best) BASIC11.46□□□□□ -0.58
Nedd8P29595 Tmod2-201ENSMUST00000064433 9884 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.58
Nedd8P29595 Svopl-202ENSMUST00000096040 2366 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.58
Nedd8P29595 Krt33a-201ENSMUST00000018399 1683 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.58
Nedd8P29595 Fam214a-205ENSMUST00000215370 4205 ntAPPRIS ALT2 TSL 5 BASIC11.46□□□□□ -0.58
Nedd8P29595 Msh5-201ENSMUST00000007250 2886 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.58
Nedd8P29595 Mcm2-201ENSMUST00000058011 3371 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Nedd8P29595 Orc5-201ENSMUST00000030872 2103 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Nedd8P29595 Kat6b-204ENSMUST00000182405 6977 ntAPPRIS P2 TSL 1 (best) BASIC11.45□□□□□ -0.58
Nedd8P29595 Sugp1-201ENSMUST00000011450 2681 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Nedd8P29595 Aqp6-201ENSMUST00000023754 2060 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Nedd8P29595 Gm18227-201ENSMUST00000211082 1468 ntBASIC11.45□□□□□ -0.58
Nedd8P29595 Gm8038-201ENSMUST00000164674 2044 ntBASIC11.45□□□□□ -0.58
Retrieved 100 of 76,532 protein–RNA pairs in 68.3 ms