Protein–RNA interactions for Protein: P28862

Mmp3, Stromelysin-1, mousemouse

Predictions only

Length 477 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Mmp3P28862 Slc19a2-202ENSMUST00000159230 3432 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Mmp3P28862 Stk33-202ENSMUST00000106745 2410 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Mmp3P28862 Fancc-218ENSMUST00000220684 2006 ntTSL 5 BASIC13.32□□□□□ -0.28
Mmp3P28862 Lrrc7-205ENSMUST00000200137 7321 ntAPPRIS P2 TSL 1 (best) BASIC13.32□□□□□ -0.28
Mmp3P28862 Abhd6-201ENSMUST00000026313 1401 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Mmp3P28862 D930019O06Rik-201ENSMUST00000181841 3663 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Mmp3P28862 Hif3a-202ENSMUST00000108492 6402 ntAPPRIS ALT2 TSL 1 (best) BASIC13.32□□□□□ -0.28
Mmp3P28862 Kcnn2-205ENSMUST00000183850 3546 ntAPPRIS P2 TSL 1 (best) BASIC13.32□□□□□ -0.28
Mmp3P28862 Clcn6-201ENSMUST00000030879 3306 ntAPPRIS P2 TSL 1 (best) BASIC13.32□□□□□ -0.28
Mmp3P28862 Cct5-201ENSMUST00000022842 1853 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Mmp3P28862 Hk3-208ENSMUST00000153665 2945 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Mmp3P28862 Myh7-201ENSMUST00000102803 6135 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Mmp3P28862 Etl4-201ENSMUST00000045555 5931 ntAPPRIS ALT2 TSL 1 (best) BASIC13.32□□□□□ -0.28
Mmp3P28862 Gm23949-201ENSMUST00000104027 127 ntBASIC13.32□□□□□ -0.28
Mmp3P28862 Zfp36l1-ps-201ENSMUST00000118349 899 ntBASIC13.32□□□□□ -0.28
Mmp3P28862 Lamr1-ps1-201ENSMUST00000119759 874 ntBASIC13.32□□□□□ -0.28
Mmp3P28862 A430060F13Rik-201ENSMUST00000124176 378 ntBASIC13.32□□□□□ -0.28
Mmp3P28862 Gm10714-201ENSMUST00000131346 874 ntTSL 2 BASIC13.32□□□□□ -0.28
Mmp3P28862 Rpl41-206ENSMUST00000177163 544 ntAPPRIS P2 TSL 1 (best) BASIC13.32□□□□□ -0.28
Mmp3P28862 Dhrs4-202ENSMUST00000226168 828 ntBASIC13.32□□□□□ -0.28
Mmp3P28862 Mlh1-201ENSMUST00000035079 2754 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Mmp3P28862 Neurl3-201ENSMUST00000056946 2598 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Mmp3P28862 Ilvbl-208ENSMUST00000218875 3020 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Mmp3P28862 Rassf5-201ENSMUST00000027688 3485 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Mmp3P28862 Dolpp1-202ENSMUST00000113612 1958 ntTSL 3 BASIC13.32□□□□□ -0.28
Mmp3P28862 Gm29530-201ENSMUST00000187556 1956 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Mmp3P28862 Fosb-207ENSMUST00000208505 3523 ntTSL 5 BASIC13.32□□□□□ -0.28
Mmp3P28862 Atxn10-201ENSMUST00000163242 2425 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Mmp3P28862 AC154262.2-202ENSMUST00000225158 1331 ntBASIC13.32□□□□□ -0.28
Mmp3P28862 Bin3-201ENSMUST00000022680 1767 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Mmp3P28862 Scara5-201ENSMUST00000022610 3794 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Mmp3P28862 Aifm3-201ENSMUST00000023448 2688 ntAPPRIS P3 TSL 1 (best) BASIC13.32□□□□□ -0.28
Mmp3P28862 Ltbp2-203ENSMUST00000163189 6470 ntAPPRIS ALT2 TSL 1 (best) BASIC13.32□□□□□ -0.28
Mmp3P28862 Sirt2-209ENSMUST00000170068 1585 ntTSL 5 BASIC13.32□□□□□ -0.28
Mmp3P28862 Ccndbp1-201ENSMUST00000060455 1569 ntAPPRIS P2 TSL 1 (best) BASIC13.32□□□□□ -0.28
Mmp3P28862 Mettl8-202ENSMUST00000100037 2254 ntAPPRIS ALT2 TSL 1 (best) BASIC13.32□□□□□ -0.28
Mmp3P28862 Myh14-203ENSMUST00000107900 6400 ntAPPRIS ALT2 TSL 5 BASIC13.32□□□□□ -0.28
Mmp3P28862 Gemin5-205ENSMUST00000172035 6213 ntAPPRIS ALT2 TSL 1 (best) BASIC13.32□□□□□ -0.28
Mmp3P28862 Cldn15-201ENSMUST00000001790 1850 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Mmp3P28862 F830115B05Rik-201ENSMUST00000197638 1894 ntBASIC13.31□□□□□ -0.28
Mmp3P28862 Pex3-201ENSMUST00000019945 2129 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Mmp3P28862 Gm9962-202ENSMUST00000186595 1417 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Mmp3P28862 Wdr31-201ENSMUST00000030087 1440 ntAPPRIS P3 TSL 1 (best) BASIC13.31□□□□□ -0.28
Mmp3P28862 Dpp6-201ENSMUST00000071500 3826 ntAPPRIS P3 TSL 1 (best) BASIC13.31□□□□□ -0.28
Mmp3P28862 AC126262.1-201ENSMUST00000221802 1904 ntBASIC13.31□□□□□ -0.28
Mmp3P28862 Dnmt3l-202ENSMUST00000123940 1452 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Mmp3P28862 Henmt1-205ENSMUST00000196533 1491 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Mmp3P28862 Pggt1b-201ENSMUST00000025354 2736 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Mmp3P28862 Ylpm1-201ENSMUST00000021670 7003 ntAPPRIS P2 TSL 5 BASIC13.31□□□□□ -0.28
Mmp3P28862 Palm2-202ENSMUST00000102905 3271 ntAPPRIS P1 TSL 5 BASIC13.31□□□□□ -0.28
Mmp3P28862 Tacr2-201ENSMUST00000020278 2258 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Mmp3P28862 Lrrfip2-213ENSMUST00000216430 1525 ntTSL 5 BASIC13.31□□□□□ -0.28
Mmp3P28862 Hopx-202ENSMUST00000113453 1113 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Mmp3P28862 Sh2d6-203ENSMUST00000159877 1210 ntAPPRIS ALT2 TSL 1 (best) BASIC13.31□□□□□ -0.28
Mmp3P28862 Sh2d6-206ENSMUST00000162561 1251 ntAPPRIS P5 TSL 1 (best) BASIC13.31□□□□□ -0.28
Mmp3P28862 Tmem40-205ENSMUST00000166254 811 ntAPPRIS P3 TSL 5 BASIC13.31□□□□□ -0.28
Mmp3P28862 Atp10d-206ENSMUST00000169617 761 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Mmp3P28862 Gm20537-202ENSMUST00000173131 889 ntAPPRIS P5 TSL 5 BASIC13.31□□□□□ -0.28
Mmp3P28862 Ighv8-4-201ENSMUST00000178949 294 ntAPPRIS P1 BASIC13.31□□□□□ -0.28
Mmp3P28862 Gm44136-201ENSMUST00000203819 1106 ntBASIC13.31□□□□□ -0.28
Mmp3P28862 Gm43962-201ENSMUST00000203898 190 ntBASIC13.31□□□□□ -0.28
Mmp3P28862 AC153974.2-201ENSMUST00000218577 1025 ntBASIC13.31□□□□□ -0.28
Mmp3P28862 C1qb-201ENSMUST00000046384 1088 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Mmp3P28862 Abhd14a-201ENSMUST00000048685 1256 ntAPPRIS P1 TSL 5 BASIC13.31□□□□□ -0.28
Mmp3P28862 Nkain3-202ENSMUST00000119374 4567 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Mmp3P28862 Sgce-209ENSMUST00000133306 1619 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Mmp3P28862 Epha5-204ENSMUST00000113401 5158 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Mmp3P28862 Scn4b-201ENSMUST00000060125 4982 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Mmp3P28862 Col26a1-202ENSMUST00000111103 2781 ntAPPRIS ALT2 TSL 1 (best) BASIC13.31□□□□□ -0.28
Mmp3P28862 Capn5-202ENSMUST00000107112 2232 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Mmp3P28862 1700110I01Rik-201ENSMUST00000112775 1671 ntTSL 5 BASIC13.31□□□□□ -0.28
Mmp3P28862 5033406O09Rik-201ENSMUST00000221314 1662 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Mmp3P28862 Ifrd1-201ENSMUST00000001672 3378 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Mmp3P28862 Otx2-209ENSMUST00000226501 2592 ntAPPRIS P1 BASIC13.3□□□□□ -0.28
Mmp3P28862 0610040F04Rik-201ENSMUST00000137478 1734 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Mmp3P28862 Car14-201ENSMUST00000036181 1709 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Mmp3P28862 Tex45-203ENSMUST00000161680 1526 ntAPPRIS P1 TSL 5 BASIC13.3□□□□□ -0.28
Mmp3P28862 Hps3-202ENSMUST00000108321 3385 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Mmp3P28862 Sgms1-212ENSMUST00000151289 2488 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Mmp3P28862 Zfp369-203ENSMUST00000130799 1580 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Mmp3P28862 Ighv5-2-201ENSMUST00000103442 350 ntAPPRIS ALT2 BASIC13.3□□□□□ -0.28
Mmp3P28862 Gltp-202ENSMUST00000112212 799 ntTSL 5 BASIC13.3□□□□□ -0.28
Mmp3P28862 Hcfc1r1-203ENSMUST00000180140 693 ntAPPRIS P2 TSL 2 BASIC13.3□□□□□ -0.28
Mmp3P28862 Gm28071-201ENSMUST00000190355 478 ntBASIC13.3□□□□□ -0.28
Mmp3P28862 Ak6-205ENSMUST00000190729 1184 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Mmp3P28862 AU022133-201ENSMUST00000200601 873 ntBASIC13.3□□□□□ -0.28
Mmp3P28862 Washc3-201ENSMUST00000020248 1052 ntAPPRIS P3 TSL 1 (best) BASIC13.3□□□□□ -0.28
Mmp3P28862 Gm39460-201ENSMUST00000215728 1266 ntTSL 5 BASIC13.3□□□□□ -0.28
Mmp3P28862 Ankrd2-201ENSMUST00000026172 1100 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Mmp3P28862 4930569F06Rik-201ENSMUST00000036821 433 ntBASIC13.3□□□□□ -0.28
Mmp3P28862 Gm37861-201ENSMUST00000193534 2869 ntBASIC13.3□□□□□ -0.28
Mmp3P28862 Zfp365-201ENSMUST00000064656 4259 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Mmp3P28862 Gli2-201ENSMUST00000062483 6637 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Mmp3P28862 Lman1l-202ENSMUST00000093832 1685 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Mmp3P28862 Pcdh7-202ENSMUST00000094783 3752 ntAPPRIS ALT1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Mmp3P28862 Cttnbp2nl-202ENSMUST00000098763 4834 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Mmp3P28862 Zfp957-202ENSMUST00000161649 2751 ntAPPRIS P1 TSL 5 BASIC13.3□□□□□ -0.28
Mmp3P28862 Eprs-201ENSMUST00000046514 4906 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Mmp3P28862 Ubap2l-202ENSMUST00000064639 4073 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Mmp3P28862 Smad4-202ENSMUST00000114939 2233 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Retrieved 100 of 76,532 protein–RNA pairs in 33.4 ms