Protein–RNA interactions for Protein: P25799

Nfkb1, Nuclear factor NF-kappa-B p105 subunit, mousemouse

Predictions only

Length 971 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nfkb1P25799 Emp1-206ENSMUST00000205156 2911 ntAPPRIS P1 TSL 5 BASIC12.85□□□□□ -0.35
Nfkb1P25799 Lcor-201ENSMUST00000067795 4810 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Nfkb1P25799 Gm43908-201ENSMUST00000205074 1472 ntBASIC12.85□□□□□ -0.35
Nfkb1P25799 BC025446-201ENSMUST00000055719 1470 ntAPPRIS ALT2 TSL 1 (best) BASIC12.85□□□□□ -0.35
Nfkb1P25799 Nkd2-201ENSMUST00000022051 4016 ntAPPRIS P3 TSL 1 (best) BASIC12.85□□□□□ -0.35
Nfkb1P25799 Rbpj-207ENSMUST00000201883 4961 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
Nfkb1P25799 Pkm-202ENSMUST00000163694 2041 ntAPPRIS ALT1 TSL 5 BASIC12.84□□□□□ -0.35
Nfkb1P25799 Cd247-201ENSMUST00000005907 1632 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Nfkb1P25799 Gtf2i-201ENSMUST00000059042 4455 ntAPPRIS P4 TSL 1 (best) BASIC12.84□□□□□ -0.35
Nfkb1P25799 Col6a3-208ENSMUST00000188587 8285 ntTSL 5 BASIC12.84□□□□□ -0.35
Nfkb1P25799 Nup98-201ENSMUST00000070165 4052 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
Nfkb1P25799 Fam222b-201ENSMUST00000073705 3258 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Nfkb1P25799 Gm44851-201ENSMUST00000205735 2309 ntBASIC12.84□□□□□ -0.35
Nfkb1P25799 Fam171a1-201ENSMUST00000062934 4129 ntAPPRIS ALT2 TSL 1 (best) BASIC12.84□□□□□ -0.35
Nfkb1P25799 BC055324-201ENSMUST00000045876 3179 ntAPPRIS P2 TSL 1 (best) BASIC12.84□□□□□ -0.35
Nfkb1P25799 Bcl7a-201ENSMUST00000031391 4718 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Nfkb1P25799 Ccdc25-201ENSMUST00000022614 2230 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Nfkb1P25799 Vax2os-203ENSMUST00000155159 4063 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
Nfkb1P25799 Gm26593-201ENSMUST00000181848 1970 ntTSL 5 BASIC12.84□□□□□ -0.35
Nfkb1P25799 Rpl15-203ENSMUST00000100799 802 ntAPPRIS P1 TSL 2 BASIC12.84□□□□□ -0.35
Nfkb1P25799 Cela2a-201ENSMUST00000102481 1070 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Nfkb1P25799 Gm11564-201ENSMUST00000105055 691 ntAPPRIS P1 BASIC12.84□□□□□ -0.35
Nfkb1P25799 Tax1bp3-202ENSMUST00000108477 1153 ntTSL 5 BASIC12.84□□□□□ -0.35
Nfkb1P25799 Gng7-205ENSMUST00000118465 875 ntAPPRIS ALT1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Nfkb1P25799 Gm11439-201ENSMUST00000118598 409 ntBASIC12.84□□□□□ -0.35
Nfkb1P25799 Gm13388-201ENSMUST00000126659 425 ntTSL 3 BASIC12.84□□□□□ -0.35
Nfkb1P25799 Cmtm1-201ENSMUST00000159039 1130 ntAPPRIS P2 TSL 1 (best) BASIC12.84□□□□□ -0.35
Nfkb1P25799 Adtrp-204ENSMUST00000179758 1046 ntAPPRIS ALT2 TSL 5 BASIC12.84□□□□□ -0.35
Nfkb1P25799 Gm27239-201ENSMUST00000184638 642 ntTSL 3 BASIC12.84□□□□□ -0.35
Nfkb1P25799 Gstp-ps-201ENSMUST00000195526 631 ntBASIC12.84□□□□□ -0.35
Nfkb1P25799 Polr2i-201ENSMUST00000019882 819 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Nfkb1P25799 Gm43050-201ENSMUST00000201062 338 ntTSL 2 BASIC12.84□□□□□ -0.35
Nfkb1P25799 Gm44651-201ENSMUST00000207343 372 ntBASIC12.84□□□□□ -0.35
Nfkb1P25799 Gm35082-202ENSMUST00000208164 525 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
Nfkb1P25799 Gm45224-201ENSMUST00000208203 414 ntBASIC12.84□□□□□ -0.35
Nfkb1P25799 AC155637.1-201ENSMUST00000218560 636 ntBASIC12.84□□□□□ -0.35
Nfkb1P25799 Rhox2a-201ENSMUST00000063340 795 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Nfkb1P25799 Cryba2-201ENSMUST00000006721 720 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Nfkb1P25799 Atg16l1-203ENSMUST00000113190 3102 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
Nfkb1P25799 Esr2-201ENSMUST00000076634 3288 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
Nfkb1P25799 Cbs-203ENSMUST00000118504 2401 ntAPPRIS ALT2 TSL 1 (best) BASIC12.84□□□□□ -0.35
Nfkb1P25799 Serpina16-202ENSMUST00000164148 1582 ntAPPRIS P1 TSL 5 BASIC12.84□□□□□ -0.35
Nfkb1P25799 Sugp2-201ENSMUST00000093458 3874 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Nfkb1P25799 Gcom1-201ENSMUST00000163998 1726 ntAPPRIS P5 TSL 5 BASIC12.84□□□□□ -0.35
Nfkb1P25799 Vash2-201ENSMUST00000047409 4032 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Nfkb1P25799 Zfp618-202ENSMUST00000064814 2868 ntAPPRIS P2 TSL 5 BASIC12.84□□□□□ -0.35
Nfkb1P25799 Lims1-202ENSMUST00000020078 4327 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Nfkb1P25799 Sars-202ENSMUST00000102625 1866 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
Nfkb1P25799 Atp9a-201ENSMUST00000029060 3529 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Nfkb1P25799 Ttc23l-201ENSMUST00000022857 1931 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Nfkb1P25799 Unc5d-201ENSMUST00000168630 9220 ntAPPRIS P3 TSL 1 (best) BASIC12.84□□□□□ -0.35
Nfkb1P25799 Plekhg6-201ENSMUST00000042647 3299 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Nfkb1P25799 Kmt5b-207ENSMUST00000113974 4150 ntAPPRIS P3 TSL 5 BASIC12.84□□□□□ -0.35
Nfkb1P25799 Arvcf-201ENSMUST00000090103 4620 ntAPPRIS P3 TSL 1 (best) BASIC12.84□□□□□ -0.35
Nfkb1P25799 Atg2b-201ENSMUST00000041055 7546 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.35
Nfkb1P25799 Klhl8-203ENSMUST00000112815 2898 ntTSL 5 BASIC12.83□□□□□ -0.35
Nfkb1P25799 Irf1-202ENSMUST00000108920 2137 ntAPPRIS P3 TSL 1 (best) BASIC12.83□□□□□ -0.35
Nfkb1P25799 Pfkfb3-204ENSMUST00000114844 2107 ntTSL 5 BASIC12.83□□□□□ -0.35
Nfkb1P25799 Slc3a2-207ENSMUST00000206598 1393 ntTSL 2 BASIC12.83□□□□□ -0.36
Nfkb1P25799 Gart-201ENSMUST00000023684 3518 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Nfkb1P25799 Insrr-202ENSMUST00000107582 4694 ntAPPRIS P1 TSL 5 BASIC12.83□□□□□ -0.36
Nfkb1P25799 Gm37324-201ENSMUST00000194500 4504 ntBASIC12.83□□□□□ -0.36
Nfkb1P25799 Ptgr2-208ENSMUST00000147363 1869 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
Nfkb1P25799 AC151895.1-201ENSMUST00000219025 1742 ntBASIC12.83□□□□□ -0.36
Nfkb1P25799 Eif1ax-201ENSMUST00000087143 5172 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Nfkb1P25799 Shbg-201ENSMUST00000005334 1419 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Nfkb1P25799 Ntng1-208ENSMUST00000133268 5587 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
Nfkb1P25799 Cspp1-202ENSMUST00000117415 1272 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
Nfkb1P25799 Gm14208-201ENSMUST00000119645 678 ntBASIC12.83□□□□□ -0.36
Nfkb1P25799 Gm14277-201ENSMUST00000121195 360 ntBASIC12.83□□□□□ -0.36
Nfkb1P25799 Glmp-201ENSMUST00000001454 1017 ntTSL 5 BASIC12.83□□□□□ -0.36
Nfkb1P25799 1110018N20Rik-202ENSMUST00000147446 1162 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
Nfkb1P25799 Tepp-204ENSMUST00000161029 968 ntAPPRIS P4 TSL 1 (best) BASIC12.83□□□□□ -0.36
Nfkb1P25799 Ccdc188-201ENSMUST00000167061 747 ntAPPRIS P1 TSL 5 BASIC12.83□□□□□ -0.36
Nfkb1P25799 Mir5132-201ENSMUST00000175166 71 ntBASIC12.83□□□□□ -0.36
Nfkb1P25799 Gm8494-201ENSMUST00000178171 1233 ntBASIC12.83□□□□□ -0.36
Nfkb1P25799 S100a3-204ENSMUST00000200290 509 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Nfkb1P25799 Rassf4-202ENSMUST00000203029 1243 ntAPPRIS ALT2 TSL 1 (best) BASIC12.83□□□□□ -0.36
Nfkb1P25799 Gm32633-201ENSMUST00000205726 587 ntTSL 3 BASIC12.83□□□□□ -0.36
Nfkb1P25799 Gm45691-201ENSMUST00000206905 1120 ntBASIC12.83□□□□□ -0.36
Nfkb1P25799 Gm33104-201ENSMUST00000214178 1010 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
Nfkb1P25799 1110017D15Rik-201ENSMUST00000030152 1114 ntAPPRIS P1 TSL 5 BASIC12.83□□□□□ -0.36
Nfkb1P25799 Taar7e-201ENSMUST00000092656 1077 ntAPPRIS P1 BASIC12.83□□□□□ -0.36
Nfkb1P25799 Spats2l-203ENSMUST00000164302 2088 ntTSL 5 BASIC12.83□□□□□ -0.36
Nfkb1P25799 Zfp148-202ENSMUST00000165418 9431 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Nfkb1P25799 Rp2-202ENSMUST00000115387 4498 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
Nfkb1P25799 Esrrb-203ENSMUST00000110204 4196 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
Nfkb1P25799 Neurl3-201ENSMUST00000056946 2598 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Nfkb1P25799 Grip1-202ENSMUST00000077871 3720 ntAPPRIS ALT2 TSL 1 (best) BASIC12.83□□□□□ -0.36
Nfkb1P25799 Fbp1-201ENSMUST00000092888 1479 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Nfkb1P25799 Usp13-201ENSMUST00000072312 7580 ntAPPRIS P2 TSL 1 (best) BASIC12.83□□□□□ -0.36
Nfkb1P25799 Mapt-204ENSMUST00000106992 5253 ntAPPRIS ALT2 TSL 1 (best) BASIC12.83□□□□□ -0.36
Nfkb1P25799 Nmral1-203ENSMUST00000115851 1306 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
Nfkb1P25799 Trhr2-201ENSMUST00000044123 1340 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Nfkb1P25799 Ugt1a8-201ENSMUST00000113139 2227 ntAPPRIS P1 TSL 5 BASIC12.82□□□□□ -0.36
Nfkb1P25799 Uspl1-205ENSMUST00000121416 3792 ntAPPRIS ALT2 TSL 1 (best) BASIC12.82□□□□□ -0.36
Nfkb1P25799 Rnls-202ENSMUST00000163093 1378 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Nfkb1P25799 Gm45495-201ENSMUST00000200940 1700 ntBASIC12.82□□□□□ -0.36
Nfkb1P25799 Frzb-201ENSMUST00000028389 3149 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Nfkb1P25799 Atg7-207ENSMUST00000182428 2264 ntAPPRIS ALT2 TSL 5 BASIC12.82□□□□□ -0.36
Retrieved 100 of 76,532 protein–RNA pairs in 74.2 ms