Protein–RNA interactions for Protein: P20334

Tnfrsf9, Tumor necrosis factor receptor superfamily member 9, mousemouse

Predictions only

Length 256 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tnfrsf9P20334 Sall4-202ENSMUST00000075044 2534 ntTSL 1 (best) BASIC10.41□□□□□ -0.74
Tnfrsf9P20334 Espn-213ENSMUST00000105659 3595 ntAPPRIS ALT2 TSL 5 BASIC10.41□□□□□ -0.74
Tnfrsf9P20334 Usp53-202ENSMUST00000197314 3586 ntTSL 5 BASIC10.41□□□□□ -0.74
Tnfrsf9P20334 Cep170b-201ENSMUST00000092279 3817 ntTSL 5 BASIC10.41□□□□□ -0.74
Tnfrsf9P20334 Matn3-201ENSMUST00000020899 3014 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
Tnfrsf9P20334 Nup88-201ENSMUST00000035283 2450 ntTSL 1 (best) BASIC10.41□□□□□ -0.74
Tnfrsf9P20334 Cyp2s1-201ENSMUST00000043314 2745 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
Tnfrsf9P20334 Fam160a2-202ENSMUST00000074686 3212 ntAPPRIS ALT2 TSL 5 BASIC10.41□□□□□ -0.74
Tnfrsf9P20334 Kcnj3-203ENSMUST00000112633 1679 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
Tnfrsf9P20334 Fam131b-202ENSMUST00000095974 3992 ntAPPRIS ALT1 TSL 1 (best) BASIC10.41□□□□□ -0.74
Tnfrsf9P20334 Cramp1l-201ENSMUST00000073337 7517 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
Tnfrsf9P20334 Ak4-202ENSMUST00000106945 4175 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.74
Tnfrsf9P20334 Itgb4-204ENSMUST00000106460 5919 ntAPPRIS ALT2 TSL 5 BASIC10.4□□□□□ -0.74
Tnfrsf9P20334 Akap10-203ENSMUST00000108710 3394 ntTSL 2 BASIC10.4□□□□□ -0.74
Tnfrsf9P20334 Kyat1-205ENSMUST00000113662 1850 ntAPPRIS P1 TSL 5 BASIC10.4□□□□□ -0.74
Tnfrsf9P20334 E230013L22Rik-201ENSMUST00000180408 1856 ntTSL 1 (best) BASIC10.4□□□□□ -0.74
Tnfrsf9P20334 2310022A10Rik-204ENSMUST00000187032 1871 ntAPPRIS ALT2 TSL 1 (best) BASIC10.4□□□□□ -0.74
Tnfrsf9P20334 Sirt3-210ENSMUST00000211179 1606 ntAPPRIS ALT2 TSL 5 BASIC10.4□□□□□ -0.74
Tnfrsf9P20334 Lrrc8e-201ENSMUST00000053035 3878 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.74
Tnfrsf9P20334 Mtus1-202ENSMUST00000059115 6548 ntTSL 5 BASIC10.4□□□□□ -0.74
Tnfrsf9P20334 Synpo-209ENSMUST00000143275 5040 ntAPPRIS ALT2 TSL 5 BASIC10.4□□□□□ -0.74
Tnfrsf9P20334 Klhdc7b-201ENSMUST00000166926 1818 ntAPPRIS P2 BASIC10.4□□□□□ -0.74
Tnfrsf9P20334 Asb3-206ENSMUST00000203878 1813 ntAPPRIS ALT2 TSL 5 BASIC10.4□□□□□ -0.74
Tnfrsf9P20334 Gm9946-202ENSMUST00000162741 1580 ntTSL 1 (best) BASIC10.4□□□□□ -0.74
Tnfrsf9P20334 Celrr-202ENSMUST00000181433 1561 ntTSL 1 (best) BASIC10.4□□□□□ -0.74
Tnfrsf9P20334 Gm20687-203ENSMUST00000185121 4242 ntTSL 2 BASIC10.4□□□□□ -0.74
Tnfrsf9P20334 Ripk4-202ENSMUST00000113743 3743 ntTSL 1 (best) BASIC10.4□□□□□ -0.74
Tnfrsf9P20334 Mcpt9-201ENSMUST00000095798 2000 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.74
Tnfrsf9P20334 Psmd2-201ENSMUST00000007212 2961 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.74
Tnfrsf9P20334 Plagl1-201ENSMUST00000121325 3946 ntAPPRIS ALT2 TSL 1 (best) BASIC10.4□□□□□ -0.74
Tnfrsf9P20334 Ebf1-202ENSMUST00000101326 3422 ntAPPRIS ALT1 TSL 1 (best) BASIC10.4□□□□□ -0.74
Tnfrsf9P20334 Grip1-216ENSMUST00000154238 2482 ntTSL 5 BASIC10.4□□□□□ -0.74
Tnfrsf9P20334 Naaladl1-201ENSMUST00000044451 2491 ntAPPRIS P1 TSL 2 BASIC10.4□□□□□ -0.74
Tnfrsf9P20334 Bhmt-201ENSMUST00000099309 2490 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.74
Tnfrsf9P20334 Tbx6-202ENSMUST00000172352 1529 ntTSL 1 (best) BASIC10.4□□□□□ -0.74
Tnfrsf9P20334 Pdlim2-205ENSMUST00000129174 729 ntTSL 2 BASIC10.4□□□□□ -0.74
Tnfrsf9P20334 G630018N14Rik-201ENSMUST00000135656 1231 ntTSL 1 (best) BASIC10.4□□□□□ -0.74
Tnfrsf9P20334 Gm13070-201ENSMUST00000146532 768 ntTSL 5 BASIC10.4□□□□□ -0.74
Tnfrsf9P20334 Tbata-210ENSMUST00000151886 915 ntTSL 1 (best) BASIC10.4□□□□□ -0.74
Tnfrsf9P20334 Gm13165-201ENSMUST00000152923 383 ntTSL 5 BASIC10.4□□□□□ -0.74
Tnfrsf9P20334 Gm25668-201ENSMUST00000157700 129 ntBASIC10.4□□□□□ -0.74
Tnfrsf9P20334 Rab11b-ps2-201ENSMUST00000178377 657 ntBASIC10.4□□□□□ -0.74
Tnfrsf9P20334 Pbx2-205ENSMUST00000183827 1186 ntTSL 5 BASIC10.4□□□□□ -0.74
Tnfrsf9P20334 Gm7430-201ENSMUST00000193824 1144 ntBASIC10.4□□□□□ -0.74
Tnfrsf9P20334 Gm44353-201ENSMUST00000200618 138 ntBASIC10.4□□□□□ -0.74
Tnfrsf9P20334 Tpt1-ps4-201ENSMUST00000210908 503 ntBASIC10.4□□□□□ -0.74
Tnfrsf9P20334 Nsd1-205ENSMUST00000224693 852 ntBASIC10.4□□□□□ -0.74
Tnfrsf9P20334 Morn3-201ENSMUST00000031437 1128 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.74
Tnfrsf9P20334 Gm3402-201ENSMUST00000036715 981 ntAPPRIS ALT2 TSL 5 BASIC10.4□□□□□ -0.74
Tnfrsf9P20334 Rpl10a-201ENSMUST00000042334 829 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.74
Tnfrsf9P20334 Gm9843-201ENSMUST00000052867 504 ntAPPRIS P1 BASIC10.4□□□□□ -0.74
Tnfrsf9P20334 Tescl-201ENSMUST00000069562 855 ntAPPRIS P1 BASIC10.4□□□□□ -0.74
Tnfrsf9P20334 Pin1rt1-201ENSMUST00000099659 1172 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.74
Tnfrsf9P20334 Sgce-201ENSMUST00000004750 1703 ntTSL 1 (best) BASIC10.4□□□□□ -0.74
Tnfrsf9P20334 Pcdhb22-202ENSMUST00000192409 6609 ntAPPRIS P1 BASIC10.4□□□□□ -0.74
Tnfrsf9P20334 Reln-207ENSMUST00000161356 11699 ntAPPRIS P3 TSL 5 BASIC10.4□□□□□ -0.74
Tnfrsf9P20334 Npepps-215ENSMUST00000167806 2307 ntTSL 5 BASIC10.4□□□□□ -0.74
Tnfrsf9P20334 Pld5-203ENSMUST00000111167 1861 ntAPPRIS ALT2 TSL 1 (best) BASIC10.4□□□□□ -0.75
Tnfrsf9P20334 Sgsm3-208ENSMUST00000139517 2996 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.75
Tnfrsf9P20334 Ralgps2-214ENSMUST00000191605 2958 ntAPPRIS P3 TSL 1 (best) BASIC10.4□□□□□ -0.75
Tnfrsf9P20334 Tmem8b-201ENSMUST00000107864 4726 ntAPPRIS P1 TSL 5 BASIC10.4□□□□□ -0.75
Tnfrsf9P20334 Skp1a-201ENSMUST00000037324 1440 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.75
Tnfrsf9P20334 Aqp6-201ENSMUST00000023754 2060 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.75
Tnfrsf9P20334 Krt26-201ENSMUST00000100482 2471 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.75
Tnfrsf9P20334 Tcirg1-201ENSMUST00000001801 2688 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.75
Tnfrsf9P20334 4931428F04Rik-203ENSMUST00000212219 2044 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.75
Tnfrsf9P20334 Cep97-202ENSMUST00000117468 2887 ntTSL 1 (best) BASIC10.4□□□□□ -0.75
Tnfrsf9P20334 Reep3-201ENSMUST00000020023 5430 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.75
Tnfrsf9P20334 Arhgap35-202ENSMUST00000171937 6251 ntAPPRIS P1 TSL 5 BASIC10.4□□□□□ -0.75
Tnfrsf9P20334 Cacna2d1-201ENSMUST00000039370 3933 ntTSL 1 (best) BASIC10.39□□□□□ -0.75
Tnfrsf9P20334 Gucy1a2-201ENSMUST00000115733 2243 ntAPPRIS P1 TSL 2 BASIC10.39□□□□□ -0.75
Tnfrsf9P20334 Etfrf1-207ENSMUST00000111726 1374 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
Tnfrsf9P20334 Acp5-203ENSMUST00000165735 1376 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
Tnfrsf9P20334 Nab1-204ENSMUST00000170269 1371 ntTSL 5 BASIC10.39□□□□□ -0.75
Tnfrsf9P20334 Stat3-203ENSMUST00000127638 4516 ntAPPRIS P3 TSL 1 (best) BASIC10.39□□□□□ -0.75
Tnfrsf9P20334 Rbm39-203ENSMUST00000109587 2810 ntAPPRIS P3 TSL 1 (best) BASIC10.39□□□□□ -0.75
Tnfrsf9P20334 Eno1b-201ENSMUST00000076155 1757 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
Tnfrsf9P20334 Coq4-201ENSMUST00000028137 1991 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
Tnfrsf9P20334 Satb2-205ENSMUST00000177424 4694 ntTSL 5 BASIC10.39□□□□□ -0.75
Tnfrsf9P20334 Leo1-201ENSMUST00000048937 2180 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
Tnfrsf9P20334 Lypd6-201ENSMUST00000053208 3620 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
Tnfrsf9P20334 Pced1b-201ENSMUST00000059433 2185 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
Tnfrsf9P20334 Tlk2-209ENSMUST00000145048 2776 ntTSL 1 (best) BASIC10.39□□□□□ -0.75
Tnfrsf9P20334 Gm43579-201ENSMUST00000202387 1307 ntBASIC10.39□□□□□ -0.75
Tnfrsf9P20334 Mapk4-201ENSMUST00000091851 4594 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
Tnfrsf9P20334 Ssh1-202ENSMUST00000112298 5584 ntAPPRIS ALT2 TSL 1 (best) BASIC10.39□□□□□ -0.75
Tnfrsf9P20334 Maged2-204ENSMUST00000112700 2107 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
Tnfrsf9P20334 Gorab-201ENSMUST00000045138 2538 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
Tnfrsf9P20334 Slc38a7-204ENSMUST00000212270 3315 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
Tnfrsf9P20334 AC168058.1-201ENSMUST00000219521 2282 ntBASIC10.39□□□□□ -0.75
Tnfrsf9P20334 Duxbl1-201ENSMUST00000049793 2266 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
Tnfrsf9P20334 Slc7a7-202ENSMUST00000195970 2057 ntAPPRIS P1 TSL 5 BASIC10.39□□□□□ -0.75
Tnfrsf9P20334 Gm10040-201ENSMUST00000080726 1662 ntBASIC10.39□□□□□ -0.75
Tnfrsf9P20334 Gas8-201ENSMUST00000093043 1681 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
Tnfrsf9P20334 Rasa3-201ENSMUST00000117551 4404 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
Tnfrsf9P20334 Styxl1-205ENSMUST00000111164 1243 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
Tnfrsf9P20334 Gm4986-201ENSMUST00000119731 549 ntBASIC10.39□□□□□ -0.75
Tnfrsf9P20334 Gm13297-201ENSMUST00000120205 934 ntBASIC10.39□□□□□ -0.75
Tnfrsf9P20334 Gm13899-201ENSMUST00000121519 1255 ntBASIC10.39□□□□□ -0.75
Tnfrsf9P20334 Gm11751-201ENSMUST00000126187 460 ntTSL 3 BASIC10.39□□□□□ -0.75
Retrieved 100 of 76,532 protein–RNA pairs in 47.6 ms