Protein–RNA interactions for Protein: P09633

Hoxc9, Homeobox protein Hox-C9, mousemouse

Predictions only

Length 260 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hoxc9P09633 Fam149b-211ENSMUST00000224930 2716 ntAPPRIS ALT2 BASIC16.07■□□□□ 0.16
Hoxc9P09633 Slc8b1-204ENSMUST00000111890 2775 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
Hoxc9P09633 Gtf2ird1-212ENSMUST00000200944 3133 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
Hoxc9P09633 Epha2-201ENSMUST00000006614 3913 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Hoxc9P09633 Ak4-201ENSMUST00000102780 4186 ntAPPRIS P1 TSL 5 BASIC16.07■□□□□ 0.16
Hoxc9P09633 Tppp-201ENSMUST00000022057 5090 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Hoxc9P09633 Mybl1-201ENSMUST00000088658 4980 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Hoxc9P09633 Zfp28-201ENSMUST00000081022 4447 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Hoxc9P09633 Tle1-203ENSMUST00000074216 4369 ntAPPRIS ALT1 TSL 5 BASIC16.06■□□□□ 0.16
Hoxc9P09633 Sema3b-205ENSMUST00000102532 3191 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Hoxc9P09633 5330406M23Rik-201ENSMUST00000195672 2094 ntBASIC16.06■□□□□ 0.16
Hoxc9P09633 Chmp4c-201ENSMUST00000029049 6188 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Hoxc9P09633 Spata18-203ENSMUST00000113548 1623 ntAPPRIS ALT2 TSL 5 BASIC16.06■□□□□ 0.16
Hoxc9P09633 Cd72-205ENSMUST00000107926 1419 ntAPPRIS P3 TSL 1 (best) BASIC16.06■□□□□ 0.16
Hoxc9P09633 Cd72-203ENSMUST00000098105 1420 ntAPPRIS ALT2 TSL 1 (best) BASIC16.06■□□□□ 0.16
Hoxc9P09633 Gsdmcl-ps-203ENSMUST00000188367 1375 ntBASIC16.06■□□□□ 0.16
Hoxc9P09633 Gm21998-201ENSMUST00000117552 1308 ntBASIC16.06■□□□□ 0.16
Hoxc9P09633 AC154262.2-202ENSMUST00000225158 1331 ntBASIC16.06■□□□□ 0.16
Hoxc9P09633 Gm14247-201ENSMUST00000120950 237 ntBASIC16.06■□□□□ 0.16
Hoxc9P09633 Aamdc-213ENSMUST00000154853 883 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
Hoxc9P09633 Ctdspl-202ENSMUST00000172464 798 ntAPPRIS ALT1 TSL 5 BASIC16.06■□□□□ 0.16
Hoxc9P09633 Gm20535-201ENSMUST00000173157 1268 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
Hoxc9P09633 Stpg4-202ENSMUST00000186211 591 ntAPPRIS ALT2 TSL 2 BASIC16.06■□□□□ 0.16
Hoxc9P09633 Ighv1-48-201ENSMUST00000191795 294 ntBASIC16.06■□□□□ 0.16
Hoxc9P09633 Gm9797-202ENSMUST00000218003 294 ntBASIC16.06■□□□□ 0.16
Hoxc9P09633 9530020I12Rik-203ENSMUST00000219371 819 ntTSL 3 BASIC16.06■□□□□ 0.16
Hoxc9P09633 Pf4-201ENSMUST00000031320 588 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Hoxc9P09633 Immp1l-201ENSMUST00000037499 955 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Hoxc9P09633 4930523C07Rik-202ENSMUST00000097513 300 ntAPPRIS P1 BASIC16.06■□□□□ 0.16
Hoxc9P09633 Ipo13-201ENSMUST00000036156 3595 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Hoxc9P09633 Ap2a1-203ENSMUST00000166972 3449 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Hoxc9P09633 BC003331-205ENSMUST00000111913 3273 ntAPPRIS P3 TSL 5 BASIC16.06■□□□□ 0.16
Hoxc9P09633 Bptf-201ENSMUST00000057892 11488 ntAPPRIS P2 TSL 5 BASIC16.06■□□□□ 0.16
Hoxc9P09633 0610010F05Rik-208ENSMUST00000180260 4128 ntAPPRIS P2 TSL 1 (best) BASIC16.06■□□□□ 0.16
Hoxc9P09633 Cbs-202ENSMUST00000078509 2403 ntAPPRIS ALT2 TSL 1 (best) BASIC16.06■□□□□ 0.16
Hoxc9P09633 Mul1-202ENSMUST00000105813 3944 ntTSL 5 BASIC16.06■□□□□ 0.16
Hoxc9P09633 Tmprss11d-202ENSMUST00000122377 2256 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
Hoxc9P09633 Lctl-201ENSMUST00000034969 2171 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Hoxc9P09633 Zmiz1os1-201ENSMUST00000156682 3469 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
Hoxc9P09633 Col5a3-201ENSMUST00000004201 6119 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Hoxc9P09633 Gm9129-201ENSMUST00000218173 1689 ntBASIC16.05■□□□□ 0.16
Hoxc9P09633 Tnk2-201ENSMUST00000115120 2794 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
Hoxc9P09633 Efna1-202ENSMUST00000118587 1632 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
Hoxc9P09633 Grid2-201ENSMUST00000095852 5860 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Hoxc9P09633 Eno3-202ENSMUST00000108548 1564 ntAPPRIS P1 TSL 5 BASIC16.05■□□□□ 0.16
Hoxc9P09633 Hsd3b4-201ENSMUST00000179429 1575 ntAPPRIS P1 TSL 2 BASIC16.05■□□□□ 0.16
Hoxc9P09633 Gm10681-203ENSMUST00000186215 1575 ntAPPRIS P1 TSL 2 BASIC16.05■□□□□ 0.16
Hoxc9P09633 Nrf1-219ENSMUST00000167972 1541 ntTSL 5 BASIC16.05■□□□□ 0.16
Hoxc9P09633 Nup88-201ENSMUST00000035283 2450 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
Hoxc9P09633 Gm16364-201ENSMUST00000153722 1313 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
Hoxc9P09633 Platr7-201ENSMUST00000181466 1334 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
Hoxc9P09633 Tubb4b-ps2-201ENSMUST00000187481 1337 ntBASIC16.05■□□□□ 0.16
Hoxc9P09633 Setdb2-201ENSMUST00000095775 3034 ntAPPRIS ALT2 TSL 5 BASIC16.05■□□□□ 0.16
Hoxc9P09633 Ctrc-202ENSMUST00000105781 784 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
Hoxc9P09633 Mup-ps26-201ENSMUST00000121751 202 ntBASIC16.05■□□□□ 0.16
Hoxc9P09633 Gm13010-201ENSMUST00000140495 828 ntTSL 5 BASIC16.05■□□□□ 0.16
Hoxc9P09633 Gm11831-201ENSMUST00000141538 629 ntTSL 3 BASIC16.05■□□□□ 0.16
Hoxc9P09633 Rpl31-202ENSMUST00000178079 487 ntAPPRIS P1 TSL 2 BASIC16.05■□□□□ 0.16
Hoxc9P09633 1700088E04Rik-206ENSMUST00000187550 1168 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
Hoxc9P09633 Gm44711-201ENSMUST00000205414 1264 ntBASIC16.05■□□□□ 0.16
Hoxc9P09633 Gm45909-201ENSMUST00000212413 1031 ntBASIC16.05■□□□□ 0.16
Hoxc9P09633 Gm10752-201ENSMUST00000218348 729 ntBASIC16.05■□□□□ 0.16
Hoxc9P09633 Plp2-201ENSMUST00000033486 1157 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Hoxc9P09633 Mia-201ENSMUST00000071986 566 ntAPPRIS P2 TSL 1 (best) BASIC16.05■□□□□ 0.16
Hoxc9P09633 Nceh1-202ENSMUST00000091284 830 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
Hoxc9P09633 Phldb1-213ENSMUST00000144251 3589 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
Hoxc9P09633 Dync1li1-201ENSMUST00000047404 2601 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Hoxc9P09633 Khdrbs2-205ENSMUST00000189878 3259 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
Hoxc9P09633 Ebp-201ENSMUST00000033509 1743 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Hoxc9P09633 Fbxo34-205ENSMUST00000168833 2993 ntAPPRIS ALT2 TSL 1 (best) BASIC16.05■□□□□ 0.16
Hoxc9P09633 Gm6198-201ENSMUST00000191337 2929 ntBASIC16.05■□□□□ 0.16
Hoxc9P09633 Lcor-201ENSMUST00000067795 4810 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Hoxc9P09633 Lbr-201ENSMUST00000005003 3510 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Hoxc9P09633 Hspa12b-201ENSMUST00000099349 3413 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Hoxc9P09633 Aldh3b2-201ENSMUST00000143380 2141 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Hoxc9P09633 Ercc8-201ENSMUST00000054835 2111 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Hoxc9P09633 Zbtb7b-201ENSMUST00000029677 3851 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Hoxc9P09633 Kcnd3-203ENSMUST00000118360 2668 ntAPPRIS P4 TSL 5 BASIC16.04■□□□□ 0.16
Hoxc9P09633 Crybg1-201ENSMUST00000020017 6608 ntAPPRIS P2 TSL 5 BASIC16.04■□□□□ 0.16
Hoxc9P09633 March7-203ENSMUST00000102748 3594 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Hoxc9P09633 1300017J02Rik-202ENSMUST00000123530 1874 ntTSL 5 BASIC16.04■□□□□ 0.16
Hoxc9P09633 Gm4735-201ENSMUST00000138679 1302 ntBASIC16.04■□□□□ 0.16
Hoxc9P09633 Gm5855-201ENSMUST00000200240 1305 ntBASIC16.04■□□□□ 0.16
Hoxc9P09633 Nr2c2-202ENSMUST00000113463 2368 ntAPPRIS ALT1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Hoxc9P09633 Cdc42se1-204ENSMUST00000107201 907 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Hoxc9P09633 Ssc4d-202ENSMUST00000111150 459 ntTSL 2 BASIC16.04■□□□□ 0.16
Hoxc9P09633 Gm15595-201ENSMUST00000120840 961 ntBASIC16.04■□□□□ 0.16
Hoxc9P09633 Gm15881-201ENSMUST00000148792 942 ntBASIC16.04■□□□□ 0.16
Hoxc9P09633 Gm4131-201ENSMUST00000186010 1264 ntAPPRIS P1 TSL 5 BASIC16.04■□□□□ 0.16
Hoxc9P09633 Gm28686-201ENSMUST00000187404 609 ntBASIC16.04■□□□□ 0.16
Hoxc9P09633 Gm8956-201ENSMUST00000203939 825 ntBASIC16.04■□□□□ 0.16
Hoxc9P09633 Ccdc153-202ENSMUST00000213891 792 ntAPPRIS ALT2 TSL 3 BASIC16.04■□□□□ 0.16
Hoxc9P09633 1700011B04Rik-212ENSMUST00000223526 889 ntTSL 5 BASIC16.04■□□□□ 0.16
Hoxc9P09633 Tmem258-201ENSMUST00000040372 606 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Hoxc9P09633 Srsf10-205ENSMUST00000126641 3754 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
Hoxc9P09633 Ddx27-205ENSMUST00000150571 2151 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
Hoxc9P09633 Gtf2ird1-229ENSMUST00000202554 3514 ntAPPRIS ALT2 TSL 1 (best) BASIC16.04■□□□□ 0.16
Hoxc9P09633 Ankrd34a-201ENSMUST00000058943 2583 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Hoxc9P09633 Zc3hc1-203ENSMUST00000115184 1504 ntTSL 5 BASIC16.04■□□□□ 0.16
Hoxc9P09633 Aldh9a1-201ENSMUST00000028004 2835 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Retrieved 100 of 76,532 protein–RNA pairs in 57.4 ms